Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01709 ATGATGCTAAGATCGTGCTGTCGGCCGCTGGAGCGGTGTTTTGGGCGGTGGGCCGGCGATGGGCTGCTCTGGCACTCGGATTTGAAGCCTCATGCCTCTGGTGATTACTCGATCGCTGTTGTTCAGGCTAACTCTTGTCTTGAAGATCAGAGTCAGATTTTCACGTCCCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGCCCTGAGGCTTCTCGCTTCGTTAATAAGCATCTTGTTCCTTATATGCACAAGTTTGCTTTAGAACAAGGTGGGCTATCAGAGGATGTTATTAAGAAAGCATTCAATGCTACAGAAGAGGAGTTTTTGCGTTTGGTGAAGAGGGCTTTGCCTGCTAAGCCACAAATTGCATCTGTTGGATCATGTTGTCTTGTAGGTGCAATTTCAAATAAGAAGTTATACATTGCGAATCTTGGCGATTCGAGAGCTGTTCTTGGCCGTAGAGTTTCTGAGAATCAAAGAACACCGGTCGTTTCAGAACGGTTGTCGACCGATCATAATGTCGGTGTCGATGAAATTAGGGAAGAGGTTGTTGCACTTCATCCTGACGACGCTCATATCGTTGTCTATACTCGTGGAGTTTGGAGGATAAAGGGCATAATTCAGGTTTCAAGATCAATCGGTGACGTCTATTTAAAGAAACCCGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAATCCTGTTCCATTGAAGCGACCGGTTATGACAGCCGAACCATCGATCCTAACACGCGAGCTTAAACCACAAGACTTATTCCTGATCTTTGCATCAGATGGTCTCTGGGAACAACTGACTGATGAGGCTGCTGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGAATGCTGCCCTACATGAGGCTGCGAGGAAACGGGAGATGAGATATGCTGAGATAAAGAAGCTCGAAAAGGGTATTCGACGTCATTTCCACGACGACATCACGGTCATCGTCGTTTATCTCGACCATAACAAAGGCTCACGTACGAGCCGAGCAAAGAACGTCGTTACCGGGTACACTAACGCACCTGTCGACATTTTCTCTCTTAACTCAAACTATGAGGGTGATGAAAAACTTCACACAAGGTTGTGA 1140 46.23 MMLRSCCRPLERCFGRWAGDGLLWHSDLKPHASGDYSIAVVQANSCLEDQSQIFTSPSATYVGVYDGHGGPEASRFVNKHLVPYMHKFALEQGGLSEDVIKKAFNATEEEFLRLVKRALPAKPQIASVGSCCLVGAISNKKLYIANLGDSRAVLGRRVSENQRTPVVSERLSTDHNVGVDEIREEVVALHPDDAHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVNAALHEAARKREMRYAEIKKLEKGIRRHFHDDITVIVVYLDHNKGSRTSRAKNVVTGYTNAPVDIFSLNSNYEGDEKLHTRL 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11316431 11318485 + CmaCh11G017090.1 Cma11g01709 304218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01709 379 CDD PP2Cc 42 337 IPR001932 -
Cma11g01709 379 Gene3D - 26 348 IPR036457 -
Cma11g01709 379 SUPERFAMILY PP2C-like 43 339 IPR036457 -
Cma11g01709 379 SMART PP2C_SIG_2 38 337 IPR001932 -
Cma11g01709 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Cma11g01709 379 SMART PP2C_4 25 335 IPR001932 -
Cma11g01709 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cma11g01709 379 PANTHER ALPHABET, ISOFORM E-RELATED 4 370 - -
Cma11g01709 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Cma11g01709 379 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 370 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01709 Cma19g00562 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01709 Cma-Chr11:11316431 Cma14g00416 Cma-Chr14:1953999 1.50E-142 dispersed
Cma11g01709 Cma-Chr11:11316431 Cma19g00562 Cma-Chr19:6383319 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01709 - K01102 csv:101216862 686.411