Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01723 ATGCTTCATCCTCTGACATCTTCTTCCTCAAACTCATCTTCCATTTCTGCAACAAAATCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTAAAATGGGTAGCGTTGAAGGAGAAAGAACAGCATCAGGGTTTGCAGCGAGAGACCCATCTGGGTTCCTCTCTCCATACACTTACCAGCTCAGAGAAACAGGGCCAGAGGATGTTCACATAAGAGTCATATGCTGTGGACTCTGCCACACTGACATTCACAACATCAAAAATGAACTCGGAATGTCCAATTACCCCATGGTTCCTGGGCATGAGGTTGTCGGAGAAGTGGTGGAAATTGGGAAGAACGTGACGAGATTTAGAGTGAAGGATGTTGTCGGAGTTGGATGTATTGTCGGATCTTGTAAAAGCTGCGAACGATGTGAGACTGACAGAGAGCAATATTGCAATAACAGGATTTGGACTAATAATGATGTTTATTCCGACGGCCGCCCTACCCAAGGCGGCTTCGCCACCGCCATGGTCGTCGACCAAAAATTTGTGGTGAAAGTTCCAGATGGGATGGCGGCAGAGCAGGCGTCGGCGTTACTATGCGCCGGCGTGACAGTATACAGCCCACTAAACCACTTCGGGCTGAAGAAAAGTGGACTGAGAGGAGCGATCTTAGGCCTCGGCGGCGTTGGGCACATGGGTGTGAAGATAGCAAAGGCATTGGGCCACCATGTCACAGTCATAAGCTCCTCCAACAAGAAGAGAGAAGAAGCTTTGGATCATCTCGGCGCCGACGACTACCTTGTTAGCTCCGACGATGCTCGGATGAAACAAGCCGTGGACTCTCTCGATTACATCATCGACACCGTGCCAGCCCATCACCCTCTTGAGCCATATCTTTCATTACTGAAACTCGACGGGAAGTTGATCATGTTGGGCGTTATTAATAACCCATTGCAGTTCGTCTCTCCCATGGTCATTTTAGGGAGGAAGACAATTACAGGGAGCTTCATCGGGAGCATGAAGGAGACGCAAGAGATTTTGGAGTTCTTCAAAGAGAAGGAGCTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTAAGATATAGGTTCGTGGTGGATGTGGAAGGAAGCAAGTTTTAA 1161 47.98 MLHPLTSSSSNSSSISATKSLSLSLSLSLSKMGSVEGERTASGFAARDPSGFLSPYTYQLRETGPEDVHIRVICCGLCHTDIHNIKNELGMSNYPMVPGHEVVGEVVEIGKNVTRFRVKDVVGVGCIVGSCKSCERCETDREQYCNNRIWTNNDVYSDGRPTQGGFATAMVVDQKFVVKVPDGMAAEQASALLCAGVTVYSPLNHFGLKKSGLRGAILGLGGVGHMGVKIAKALGHHVTVISSSNKKREEALDHLGADDYLVSSDDARMKQAVDSLDYIIDTVPAHHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILEFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11428029 11429772 + CmaCh11G017230.1 Cma11g01723 304232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01723 386 Pfam Alcohol dehydrogenase GroES-like domain 66 180 IPR013154 -
Cma11g01723 386 SUPERFAMILY GroES-like 47 212 IPR011032 -
Cma11g01723 386 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 35 385 - -
Cma11g01723 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 186 349 IPR036291 -
Cma11g01723 386 SMART PKS_ER_names_mod 51 379 IPR020843 GO:0016491
Cma11g01723 386 Pfam Zinc-binding dehydrogenase 222 345 IPR013149 -
Cma11g01723 386 Gene3D - 195 351 - -
Cma11g01723 386 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 99 113 IPR002328 GO:0008270|GO:0016491
Cma11g01723 386 Gene3D - 44 381 - -
Cma11g01723 386 PANTHER ALDEHYDE REDUCTASE 35 385 - -
Cma11g01723 386 CDD CAD1 43 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01723 Cma-Chr11:11428029 Cma20g01080 Cma-Chr20:8298392 2.23E-121 dispersed
Cma02g00962 Cma-Chr2:5722571 Cma11g01723 Cma-Chr11:11428029 1.39E-102 transposed
Cma11g01723 Cma-Chr11:11428029 Cma16g00342 Cma-Chr16:1603529 0 wgd
Cma11g01723 Cma-Chr11:11428029 Cma04g00470 Cma-Chr4:2402661 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01723 K00083 - csv:101214622 629.017