Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01723 | ATGCTTCATCCTCTGACATCTTCTTCCTCAAACTCATCTTCCATTTCTGCAACAAAATCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTAAAATGGGTAGCGTTGAAGGAGAAAGAACAGCATCAGGGTTTGCAGCGAGAGACCCATCTGGGTTCCTCTCTCCATACACTTACCAGCTCAGAGAAACAGGGCCAGAGGATGTTCACATAAGAGTCATATGCTGTGGACTCTGCCACACTGACATTCACAACATCAAAAATGAACTCGGAATGTCCAATTACCCCATGGTTCCTGGGCATGAGGTTGTCGGAGAAGTGGTGGAAATTGGGAAGAACGTGACGAGATTTAGAGTGAAGGATGTTGTCGGAGTTGGATGTATTGTCGGATCTTGTAAAAGCTGCGAACGATGTGAGACTGACAGAGAGCAATATTGCAATAACAGGATTTGGACTAATAATGATGTTTATTCCGACGGCCGCCCTACCCAAGGCGGCTTCGCCACCGCCATGGTCGTCGACCAAAAATTTGTGGTGAAAGTTCCAGATGGGATGGCGGCAGAGCAGGCGTCGGCGTTACTATGCGCCGGCGTGACAGTATACAGCCCACTAAACCACTTCGGGCTGAAGAAAAGTGGACTGAGAGGAGCGATCTTAGGCCTCGGCGGCGTTGGGCACATGGGTGTGAAGATAGCAAAGGCATTGGGCCACCATGTCACAGTCATAAGCTCCTCCAACAAGAAGAGAGAAGAAGCTTTGGATCATCTCGGCGCCGACGACTACCTTGTTAGCTCCGACGATGCTCGGATGAAACAAGCCGTGGACTCTCTCGATTACATCATCGACACCGTGCCAGCCCATCACCCTCTTGAGCCATATCTTTCATTACTGAAACTCGACGGGAAGTTGATCATGTTGGGCGTTATTAATAACCCATTGCAGTTCGTCTCTCCCATGGTCATTTTAGGGAGGAAGACAATTACAGGGAGCTTCATCGGGAGCATGAAGGAGACGCAAGAGATTTTGGAGTTCTTCAAAGAGAAGGAGCTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTAAGATATAGGTTCGTGGTGGATGTGGAAGGAAGCAAGTTTTAA | 1161 | 47.98 | MLHPLTSSSSNSSSISATKSLSLSLSLSLSKMGSVEGERTASGFAARDPSGFLSPYTYQLRETGPEDVHIRVICCGLCHTDIHNIKNELGMSNYPMVPGHEVVGEVVEIGKNVTRFRVKDVVGVGCIVGSCKSCERCETDREQYCNNRIWTNNDVYSDGRPTQGGFATAMVVDQKFVVKVPDGMAAEQASALLCAGVTVYSPLNHFGLKKSGLRGAILGLGGVGHMGVKIAKALGHHVTVISSSNKKREEALDHLGADDYLVSSDDARMKQAVDSLDYIIDTVPAHHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILEFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11428029 | 11429772 | + | CmaCh11G017230.1 | Cma11g01723 | 304232 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01723 | 386 | Pfam | Alcohol dehydrogenase GroES-like domain | 66 | 180 | IPR013154 | - | |
Cma11g01723 | 386 | SUPERFAMILY | GroES-like | 47 | 212 | IPR011032 | - | |
Cma11g01723 | 386 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 35 | 385 | - | - | |
Cma11g01723 | 386 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 186 | 349 | IPR036291 | - | |
Cma11g01723 | 386 | SMART | PKS_ER_names_mod | 51 | 379 | IPR020843 | GO:0016491 | |
Cma11g01723 | 386 | Pfam | Zinc-binding dehydrogenase | 222 | 345 | IPR013149 | - | |
Cma11g01723 | 386 | Gene3D | - | 195 | 351 | - | - | |
Cma11g01723 | 386 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 99 | 113 | IPR002328 | GO:0008270|GO:0016491 | |
Cma11g01723 | 386 | Gene3D | - | 44 | 381 | - | - | |
Cma11g01723 | 386 | PANTHER | ALDEHYDE REDUCTASE | 35 | 385 | - | - | |
Cma11g01723 | 386 | CDD | CAD1 | 43 | 380 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01723 | Cma-Chr11:11428029 | Cma20g01080 | Cma-Chr20:8298392 | 2.23E-121 | dispersed | |
Cma02g00962 | Cma-Chr2:5722571 | Cma11g01723 | Cma-Chr11:11428029 | 1.39E-102 | transposed | |
Cma11g01723 | Cma-Chr11:11428029 | Cma16g00342 | Cma-Chr16:1603529 | 0 | wgd | |
Cma11g01723 | Cma-Chr11:11428029 | Cma04g00470 | Cma-Chr4:2402661 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01723 | K00083 | - | csv:101214622 | 629.017 |