Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01752 ATGGAGATTCTCTCTTTCACTCTTTATTTAATAATATTCCTCATTTCTTCTGCTTTTTTGCTTTATTTCAAGAGAAATGAAACCCCAAAACCCAGAAAATCTCTTAGGCTTCCTCCTGGTTCCATGGGATTGCCATGGATTGGAGAAACTTTGCAGCTTTATTCTCAAGATCCCAACATATTTTTCTCCGAAAAACAGAGAAGATATGGAGAAATTTTTAAAACCAACATTTTGGGATGTCCTTGTGTTATGTTGGCCAGCGCCGCCGCAGCCCGGTTCGTTTTGGTAACTAATGCTCATTTATTCCGGCCGACTTACCCCAAAAGCAAAGAGACAATGATCGGCCCGGCGGCGCTTTTCTTCCACCAGGGAAATTACCATTCTAACATTCGGAAACTTGTTCAAAATTCCCTCTGTCTCGGAAGCCTCAGAAACCTTGTTCCTCATATTGAAACCGCCGCCATTTCCGCCGCCGAATCATGGGCTGCCGCCGGCCACGTCATCAACACCTTCCTTGAAATGAAAAAGTTTGCTTTCGATGTGGGAATTCTAGCAGTGTTTGGGAAGCTAGAAAGTGATTACAGTGAGAAACTCAAAGAAAACTATTGCATATTAGACAAAGGCTACAACTCTTTTCCAACCAGATTACCAGGAACAGCATATTCCAAAGCATTATCAGCAAGGAAGAAACTTAGAGAGATTCTGGGAGAGATAATAATGGAGAGGAGAGAAAAAAGGGTAACAGAGAGAGATTTGGTGGGTCATCTCTTGAGCTTCAGAGATGAAAATGGTGGAATTTTAAGTGAGGATCAGATCGCCGACAACATCATCGGAGTTCTGTTTGCAGCGCAGGACACCACCGCCAGTGTGCTGACGTGGATCCTTAAGTACCTCCATGATAATTTGAAGCTCTTTGAGGCTGTCCGGGCAGAGCAGATGGATATTTATAGAAGAAACGGTGATGGGAAGATGCCTCTGTCTTGGGCACAGATTAAGGATATGCCCTTAACTCATAGGGTTGTATTAGAAAGCTTGAGGATGGCTAGTATCATATCCTTCACTTTTAGGGAGGCAGTGGTGGATGTGGAATATAAAGGGTTCCTAATACCAAAGGGTTGGAAGGTGATGCCTTTGTTCAGGAATATTCATCACAGTCCTGACTACTTCCCAAACCCTCAAATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGGCCCAATACATTCATGCCATTTGGCAATGGAGTACACTCTTGCCCTGGGAATGAACTTGCCAAGCTGGAGATCCTCATCTTACTTCATCACCTCCTTACCAAATTTAGGTGGGAAGTTGTGGGATCACAGAGTGGGGTTCAATATGGGCCATTCCCAGTGCCTGTCAACGGGCTACCGGCCAGATTTTTCAAACAAACGACAGCCAACCAATAG 1428 44.26 MEILSFTLYLIIFLISSAFLLYFKRNETPKPRKSLRLPPGSMGLPWIGETLQLYSQDPNIFFSEKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNIRKLVQNSLCLGSLRNLVPHIETAAISAAESWAAAGHVINTFLEMKKFAFDVGILAVFGKLESDYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDLVGHLLSFRDENGGILSEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNLKLFEAVRAEQMDIYRRNGDGKMPLSWAQIKDMPLTHRVVLESLRMASIISFTFREAVVDVEYKGFLIPKGWKVMPLFRNIHHSPDYFPNPQIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLLTKFRWEVVGSQSGVQYGPFPVPVNGLPARFFKQTTANQ 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11648636 11651168 + CmaCh11G017520.1 Cma11g01752 304261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01752 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Cma11g01752 475 Gene3D Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 469 - -
Cma11g01752 475 SUPERFAMILY Cytochrome P450 32 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma11g01752 475 PANTHER CYTOCHROME P450 26 12 469 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00601 Cma-Chr4:3033551 Cma11g01752 Cma-Chr11:11648636 2.65E-175 dispersed
Cma11g01752 Cma-Chr11:11648636 Cma16g00505 Cma-Chr16:2597830 0 dispersed
Cma01g01840 Cma-Chr1:12161356 Cma11g01752 Cma-Chr11:11648636 0 wgd
Cma11g01752 Cma-Chr11:11648636 Cma19g00605 Cma-Chr19:6623302 0 wgd
Cma11g01752 Cma-Chr11:11648636 Cma05g00186 Cma-Chr5:803874 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01752 K09843 - csv:101219389 811.986