Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01753 ATGGACTCGATATGGAGCCACACTGGCGCGCCAGACGCCTCGCATTTTGTCATCGCCGTCCAGTTCGCCTTCGGCTTTTACGCTGCGAGGTTCCTACTCGACAGATTCATTTTTCGTAGGTTCGCAATTTGGCTGTTGAGCAAAGGAGCTGCTCCACTGAAACTTGATGAGGCTACTCAGTCAAAGGTTGTAAAATGTTCGGAATCAATGTGGAAACTAGCATACTATGGCACTGTTGAAATATGCATTTTAAAAATTGCATATCATGAACCATGGTTTAGAGATTCAAATCAATACTTCAAAGGCTGGCCAAATCAGGAGTTGCAGCTTCCTCTAAAACTATTCTATATGTGCCAATGTGGGTTCTACTTATATAGCATTGCTGCTCTTCTTATATGGGAGACTCGGAGAAAGGACTTCTCTGTCATGATGTCTCATCATGTAATTACTGTTATCTTGATCGGATATTCATATATGACGAGATTTTTCCAGATTGGATCGGTTATTCTTGCACTCCATGATGCAAGTGATGTCTTCATGGAAGCTGCCAAGGTTTTTAAATATTCTGAGAAAGAACTCGGAGCAAGTGTTTTCTTTGGATTTTTTGCCGTTACATGGCTTGTATTGCGGCTTATATTCTTCCCATTCTGGGTTATAAAATCAACAAGCTATGATCTCTGTGAGTACTTGAAGCTATCAGATGTGAATTCCAGATTGATATACTATGTTTTCAACACGATGTTGTTGATGTTGCTTGTGTTCCACATATACTGGTGGTTGCTCATATGCTCCATGATCCGTAGACAGCTGAAAAATAGGGGAAAAGTTGGAGAGGATATAAGATCTGATTCGGAGGATGACGATTAG 867 40.95 MDSIWSHTGAPDASHFVIAVQFAFGFYAARFLLDRFIFRRFAIWLLSKGAAPLKLDEATQSKVVKCSESMWKLAYYGTVEICILKIAYHEPWFRDSNQYFKGWPNQELQLPLKLFYMCQCGFYLYSIAALLIWETRRKDFSVMMSHHVITVILIGYSYMTRFFQIGSVILALHDASDVFMEAAKVFKYSEKELGASVFFGFFAVTWLVLRLIFFPFWVIKSTSYDLCEYLKLSDVNSRLIYYVFNTMLLMLLVFHIYWWLLICSMIRRQLKNRGKVGEDIRSDSEDDD 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11674198 11680306 + CmaCh11G017530.1 Cma11g01753 304262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01753 288 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 9 285 IPR016439 GO:0046513|GO:0050291
Cma11g01753 288 PIRSF LAG1_LAC1 10 288 IPR016439 GO:0046513|GO:0050291
Cma11g01753 288 Pfam TLC domain 65 263 IPR006634 GO:0016021
Cma11g01753 288 PANTHER BNAA01G26210D PROTEIN 9 285 - -
Cma11g01753 288 ProSiteProfiles TLC domain profile. 64 271 IPR006634 GO:0016021
Cma11g01753 288 SMART lag1_27 64 271 IPR006634 GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01753 Cma19g00605 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02191 Cma-Chr4:15284556 Cma11g01753 Cma-Chr11:11674198 2.75E-85 dispersed
Cma11g01753 Cma-Chr11:11674198 Cma15g00840 Cma-Chr15:4252449 6.87E-76 dispersed
Cma11g01753 Cma-Chr11:11674198 Cma19g00605 Cma-Chr19:6623302 2.49E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01753 - - csv:101205881 544.658