Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01835 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGTCAAAAGAGTATGTTCATGTGCGCATTCAGCAACGCAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGATGGAAGGAATGGTTCCATACATATGTTTTGCCCGTTTGCCCCCTTCCTCCTCTCGCTCTTTTCTATGCTTCAATGCCACAATCAATAACGTTGCCAGTAATGGTTGCCTTGCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTGAGTTCTTTTTCTGTTTACAGCAGCTTAACTGGTAGTAGTGGACATTATATACCTATCTTCTTTAGAACTTGGAAGTGA 534 43.26 MSEFNVQIPSAFDPFADANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQMEGMVPYICFARLPPSSSRSFLCFNATINNVASNGCLAGYTTSGRPKKECVYLPCAGWHCEEGEHQDSRFLSSFSVYSSLTGSSGHYIPIFFRTWK 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12252767 12255354 - CmaCh11G018350.1 Cma11g01835 304344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01835 177 Gene3D - 1 84 - -
Cma11g01835 177 Pfam Translation initiation factor SUI1 28 78 IPR001950 GO:0003743|GO:0006413
Cma11g01835 177 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 4 89 - -
Cma11g01835 177 SUPERFAMILY eIF1-like 4 80 IPR036877 GO:0003743|GO:0006413
Cma11g01835 177 PANTHER BNAA09G12640D PROTEIN 4 89 - -
Cma11g01835 177 CDD eIF1_SUI1 29 81 IPR005874 GO:0003743
Cma11g01835 177 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 84 IPR001950 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01835 Cma19g00930 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01835 Cma-Chr11:12252767 Cma19g00931 Cma-Chr19:8323374 1.31E-55 dispersed
Cma11g01834 Cma-Chr11:12249549 Cma11g01835 Cma-Chr11:12252767 2.93E-66 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01835 K03113 - csv:101219651 166.392