Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01837 | ATGGCCATTTCTTCCAAGCTTTTTTCCCTTCTCTTTTTGCAGCTAATGTTCATCTCGTCTCTCTCGAACATTGCTGAAGCAGACGGCTTGTCGTCTAGGTTTTATCAGTACACTTGCCCCGGGTTAGAGTATACTGTCGCCAAAACGGTGGCTTTGTATATTAAGAAACAACCTACTCTAGCAGCTTCATTATTGAGGATGCACTTCCACGACTGCTTTGTTAGGGGTTGTGATGGTTCTGTACTACTAAATTCGACACCAAACAATCAAGCCGAGAAAGATTCTATTCCTAACCTTACTTTAAGAGGTTACAATGTCGTCGATGCTGTTAAAGCGGTCGTTGAAAAGCAGTGCCCTGGTGTCGTTTCATGTGCTGACATCCTCGCTTTGGTGGCTCGTGACGCCGTTAGAATGATTGGAGGCCCATTTTGGGAAGTTCCAACAGGAAGAAGAGACGGAACTGTGTCGATCTCAAGAGAAGCCCTAATCAATTTGCCGCCTCCCTTCGCCAACATCTCATCTCTCAAAACAAGTTTCCTCTCCTTAGGTCTCTCCGTCAAAGATCTCGTCGTTTTATCCGGAGCACACACAATCGGAGTCTCGAAATGCAGTTCCTTCTCCAACCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCGAAATTAGACAAATACTACGCCGTCGCATTGAAAGGTAAATGCAAGCCAAACGACCAGAAATCGATCGTCGAGATGGATCCAGGAAGCTTCAAGACCTTCGATGAAAGTTACTACACTCTCGTCTCCAAGAGAAGAGGTTTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTGACACCAAAGCCTACGTTGTATTACAAGCACAAACACGCGGCGCTACTTTCGCCGTCGATTTCGCTGAATCGATGATCAGTATGGGACAGATCGGCGTCCTCACCGGCAACGACGGCGAAATTAGGCGCCAATGTAGTGTTGTTAACTGA | 987 | 47.32 | MAISSKLFSLLFLQLMFISSLSNIAEADGLSSRFYQYTCPGLEYTVAKTVALYIKKQPTLAASLLRMHFHDCFVRGCDGSVLLNSTPNNQAEKDSIPNLTLRGYNVVDAVKAVVEKQCPGVVSCADILALVARDAVRMIGGPFWEVPTGRRDGTVSISREALINLPPPFANISSLKTSFLSLGLSVKDLVVLSGAHTIGVSKCSSFSNRLYNFTGKGDADPKLDKYYAVALKGKCKPNDQKSIVEMDPGSFKTFDESYYTLVSKRRGLFQSDSALLDDPDTKAYVVLQAQTRGATFAVDFAESMISMGQIGVLTGNDGEIRRQCSVVN | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12261525 | 12263604 | + | CmaCh11G018370.1 | Cma11g01837 | 304346 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01837 | 328 | PANTHER | PEROXIDASE 25-RELATED | 10 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Haem peroxidase superfamily signature | 61 | 75 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Haem peroxidase superfamily signature | 122 | 139 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Haem peroxidase superfamily signature | 140 | 152 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Haem peroxidase superfamily signature | 247 | 262 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 39 | 58 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 63 | 83 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 102 | 115 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 121 | 131 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 140 | 155 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 245 | 260 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 261 | 278 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | PRINTS | Plant peroxidase signature | 302 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | ProSitePatterns | Peroxidases active site signature. | 61 | 72 | IPR019794 | GO:0004601 | |
Cma11g01837 | 328 | CDD | secretory_peroxidase | 29 | 327 | IPR033905 | GO:0004601|GO:0042744 | |
Cma11g01837 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - | |
Cma11g01837 | 328 | Pfam | Peroxidase | 47 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | Gene3D | Peroxidase, domain 2 | 166 | 307 | - | - | |
Cma11g01837 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 29 | 328 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 29 | 328 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01837 | 328 | Gene3D | - | 33 | 328 | - | - | |
Cma11g01837 | 328 | PANTHER | PEROXIDASE | 10 | 326 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma11g01837 | Cma20g00633 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01837 | Cma-Chr11:12261525 | Cma03g00990 | Cma-Chr3:6983239 | 4.66E-92 | dispersed | |
Cma17g01002 | Cma-Chr17:7327612 | Cma11g01837 | Cma-Chr11:12261525 | 2.75E-66 | dispersed | |
Cma19g00277 | Cma-Chr19:2006785 | Cma11g01837 | Cma-Chr11:12261525 | 1.82E-76 | dispersed | |
Cma11g01837 | Cma-Chr11:12261525 | Cma11g01838 | Cma-Chr11:12266469 | 2.04E-129 | tandem | |
Cma18g00648 | Cma-Chr18:5907554 | Cma11g01837 | Cma-Chr11:12261525 | 3.38E-74 | transposed | |
Cma19g01104 | Cma-Chr19:9131066 | Cma11g01837 | Cma-Chr11:12261525 | 8.66E-73 | transposed | |
Cma11g01837 | Cma-Chr11:12261525 | Cma02g00155 | Cma-Chr2:726827 | 1.46E-120 | wgd | |
Cma11g01837 | Cma-Chr11:12261525 | Cma20g00633 | Cma-Chr20:2948709 | 2.62E-127 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01837 | K00430 | - | csv:101219177 | 539.265 |