Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma11g01838 | ATGGAGCTCTCTCGTGGTCTTGTCTTTCTAATGGTATGTCTTTTAGGACTTGCTAGCTCAACCCAAGCTCACCTCCAGCTCGGTTATTATGCAAAGACTTGCCCTCGTGCTGAGAAAATTATCTCCGAGTTCGTCTACAAGAGCGTTCCCAAGGTTCCCACCTTGGCTGCTGCCTTCATTCGAATGCATTTTCACGATTGCTTCGTTCGGGGTTGTGATGCATCTGTACTTTTGAACTCGACTGCTGGTAACCCGAGTGAGAAGGAATCTCCGCCGAATCTAACATTGAGAGGCTTCGATTTCCTTGATAAAATCAAGAAGCTTTTGGAAGATGAGTGCCCTGGAATCGTCTCATGTTCCGACATTCTTTCTCTGGTTACAAGAGACTCGATCGTTTCCATTGGCGGTCCATTTTGGAGGGTTCCAACAGGAAGAAGAGACGGAGTGATCTCGAGATCATCAGAAGCTTTAGTGAACATTCCACCACCGTTTGCTAACTTGTCGACTCTCGAACGACAATTCGCCAACCAAGGTCTTGATTTAAAAGACTTGGTTTTGTTATCAGGAGCTCACACCATTGGGATATCCCATTGCTCATCATTCACAAGGCGGCTATACAACTTCACAGGAGTGGGAGACCAAGACCCATCATTGGACTCCGAGTACGCCGCCAATCTAAAGGCAAAGAAATGCAAAAGCATACGTGCTAACGGCATCGTCGAAATGGACCCTGGCAGCTTCCGGACCTTCGACCTCAGCTACTACTCTCTGCTCCTCAAGCGCCGTGGGCTGTTCCAGTCCGACGCGGCGCTGACCACCAGCCCGGTCACCAAGGCCTTCGTCACGGACCTGCTCAATGGCTCGGTTAAGAATTTCTTCTCCGAATTTGGGTTAGCCATGGAGAAGATGGGTCGGATCGGGGTCAAGACCGGCGCCGAGGGGGAGATTCGCAAGCATTGTGCTCTTGTTAATGCTTGA | 978 | 49.8 | MELSRGLVFLMVCLLGLASSTQAHLQLGYYAKTCPRAEKIISEFVYKSVPKVPTLAAAFIRMHFHDCFVRGCDASVLLNSTAGNPSEKESPPNLTLRGFDFLDKIKKLLEDECPGIVSCSDILSLVTRDSIVSIGGPFWRVPTGRRDGVISRSSEALVNIPPPFANLSTLERQFANQGLDLKDLVLLSGAHTIGISHCSSFTRRLYNFTGVGDQDPSLDSEYAANLKAKKCKSIRANGIVEMDPGSFRTFDLSYYSLLLKRRGLFQSDAALTTSPVTKAFVTDLLNGSVKNFFSEFGLAMEKMGRIGVKTGAEGEIRKHCALVNA | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12266469 | 12267961 | + | CmaCh11G018380.1 | Cma11g01838 | 304347 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma11g01838 | 325 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Haem peroxidase superfamily signature | 183 | 198 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Haem peroxidase superfamily signature | 243 | 258 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | CDD | secretory_peroxidase | 24 | 323 | IPR033905 | GO:0004601|GO:0042744 | |
Cma11g01838 | 325 | PANTHER | PEROXIDASE 25-RELATED | 5 | 324 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 324 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | Pfam | Peroxidase | 43 | 283 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | Gene3D | - | 29 | 324 | - | - | |
Cma11g01838 | 325 | Gene3D | Peroxidase, domain 2 | 161 | 303 | - | - | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 182 | 194 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 241 | 256 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 257 | 274 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | PRINTS | Plant peroxidase signature | 298 | 311 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 183 | 193 | IPR019793 | - | |
Cma11g01838 | 325 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 324 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma11g01838 | 325 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Cma11g01838 | 325 | PANTHER | PEROXIDASE | 5 | 324 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma02g00155 | Cma11g01838 | CCT | |
Cma02g00155 | Cma11g01838 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g00155 | Cma-Chr2:726827 | Cma11g01838 | Cma-Chr11:12266469 | 3.14E-171 | dispersed | |
Cma08g01197 | Cma-Chr8:7347661 | Cma11g01838 | Cma-Chr11:12266469 | 2.46E-108 | dispersed | |
Cma11g01838 | Cma-Chr11:12266469 | Cma20g00633 | Cma-Chr20:2948709 | 2.69E-174 | dispersed | |
Cma11g01837 | Cma-Chr11:12261525 | Cma11g01838 | Cma-Chr11:12266469 | 2.04E-129 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma11g01838 | K00430 | - | csv:101213629 | 468.003 |