Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01895 ATGGAAGTCGACGAAGAGTACCGAAGAAAAGAGCAACTCGTTCTTGTGGCAATTGTTGTACTCGCTTCCTTGGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCTAAACGCCTCAAAATCCGCAAAAGGGATGATCTTGAGAAGGGAGGTAGTTTTGACAATGTTAAAGAATTTTCCACCGAGAAAGGCCTCCAAGTGTTCACCTTCAAGCAGCTATACTCAGCTACCTGTGGCTTTAGCAAGTCAAATGTGGTCGGGCACGGTAGCTTTGGATATGTATACCGAGGAGTTCTCAACGATGGGAGAAAGGTTGCGATTAAGCTTATGGATCAAGCAGGGAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGACTTCATTCACCATATTTGTTGGCCTTGCTCGGGTATTGCTCTAATAGCAATCATAAATTGCTGGTGTACGAGTTCATGGCTAATGGCGGTCTGCAAGAACATCTGTATCCTGTTAGCAGTTCAAATTCAGTCAGTGTTAAGTTGGACTGGGAAACGCGGTTGAGAGTTGCGCTTGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACATGTAAGCCCCCCAATAATTCATAGGGATTTCAAGAGCAGCAATGTTCTGTTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATCGGTTCAGACAAAGTCGGGGGACATGTATCCACTCGAGTACTGGGGACACAAGGATATGTTGCGCCTGAGTATGCGCTAACAGGGCATTTGACAACAAAGTCAGATGTCTATAGTTACGGGGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAATACTCCATGAAGGATGTTGTTCAAGTTGCAGCCATAGCCGCAATGTGTGTTCAACCAGAGGCAGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGACAGCTTCGAAGATTGGTAGCGGTTCTAGTTCCAGCGCTACCAAGTCGCCTGTGGCGCACGACAAGGCTAGTTCGGAAGACTGA 1200 46.5 MEVDEEYRRKEQLVLVAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRDDLEKGGSFDNVKEFSTEKGLQVFTFKQLYSATCGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSNSNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPIIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTASKIGSGSSSSATKSPVAHDKASSED 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12565768 12569299 + CmaCh11G018950.1 Cma11g01895 304404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01895 399 MobiDBLite consensus disorder prediction 375 399 - -
Cma11g01895 399 Gene3D Phosphorylase Kinase; domain 1 51 163 - -
Cma11g01895 399 PANTHER OS07G0227300 PROTEIN 3 396 - -
Cma11g01895 399 MobiDBLite consensus disorder prediction 375 391 - -
Cma11g01895 399 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Cma11g01895 399 Gene3D Transferase(Phosphotransferase) domain 1 164 383 - -
Cma11g01895 399 CDD STKc_IRAK 94 367 - -
Cma11g01895 399 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma11g01895 399 PANTHER OS01G0750732 PROTEIN 3 396 - -
Cma11g01895 399 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Cma11g01895 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Cma11g01895 399 SUPERFAMILY Protein kinase-like (PK-like) 62 364 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01895 Cma19g01016 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01895 Cma-Chr11:12565768 Cma06g00343 Cma-Chr6:1593759 2.63E-109 dispersed
Cma10g01071 Cma-Chr10:6785035 Cma11g01895 Cma-Chr11:12565768 2.84E-140 transposed
Cma11g01121 Cma-Chr11:6304589 Cma11g01895 Cma-Chr11:12565768 1.60E-141 transposed
Cma11g01895 Cma-Chr11:12565768 Cma19g01016 Cma-Chr19:8728616 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68931 PF07714 PK_Tyr_Ser-Thr 2.90E-44 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01895 - - csv:101204636 706.442