Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma11g01948 ATGCTATCCACTCTGCAGCCTCCTCGCTATTCCCTTTCTCGCTTCCCTCTCCATCTTCCTTCTAAACCCTTCTTCTTTCACTCCAAACAAACCCCGCTCTCATCTCCATATCCCATCGCCAATGCCACTCTCACCGACCAAATTGCAACTTCCGCTTCTTCCCCATCTCTTCACTCCCAAATTCTCTCCATCCGCCATTCCCTTCTTTCCCGCCAATTCACTGCCACCCAACTTGCCGAGTCCTATCTCAATCGCCTTCGAGCATTGGAGCCTCACCTTAAGTCATTTCTCCACGTCTCTGATAGCGTTCTCTCCGATGGCCGCGAGATCGATGACAAAATTCTGAGAAATGAGGAATTGGGTCCTTTGGCTGGGGTCCTTGTCGGCGTTAAGGACAACATTTGTACTGCGGGTATGCCTTCCACTGGTGGGTCTAGGATTCTTGATGGGTATCGACCGCCATTTGATGCTACTGCTGTGAGGAGAATCAAGGAGTTGGGCGGGATTGTGGTTGGGAAGACTAATTTGGATGAGTTTGGAATGGGTAGTACTACTGAAGCCTCCGCTTTCCAGGTGACTGCAAATCCGTGGGATTTGAAAAGGGTCCCGGGAGGATCATCAGGAGGCTCCGCTTCAGCTGTTTCTGCTAGGCAGTGTGTGGTGTCTTTAGGAAGTGATACAGGTGGAAGTGTGCGGCAGCCAGCGTCTTTTTGCGGTGTTGTTGGGTTGAAACCAACGTATGGTCGTGTCTCAAGATTTGGACTTATGGCCTATGCTTCATCGCTTGATGTTATTGGGTGCTTGGGGACAACAGTTGCTGATGCTGGGATTCTTCTACATGCAATTTCTGGTCATGATACACTTGACGCCACTAGCAGTAAACGAGAAGTTCATGATTTCACGTCGCAATTTACTGCTGTTGATTCATTGGAAAGTAAACCCTTGAAGGGATTGAGGATTGGCCTAATTCGTGAAACTCTTGATAATGGTGTTGATGGTAAAGTAAGTTCTGCAATACGTGCTGCTGCTTCACATCTTGAAGAACTGGGATGCTCCATCAATGAGGTATCACTGCCATCATTCTCTCTTGGGCTGCCTGCCTATTACATTCTTGCATCATCTGAATCATCTTCAAACTTAGCACGATATGATGGTGTCAGATATGGAAATCAAGCTATTGCTGATGAGCTAACTGGCCTATATCAAAATTCCAGAGCAACAGGATTTGGTTCAGAGGTGAAAATGAGAATTTTGATGGGAACATACGCTCTCTCTGCTGGTTATTATGATGCTTACTACAAGCGTGCTCAGCAGGTGAGAACCATTATTCAGAAAAGCTTCAAGGCAGCATTAGATGAATATGATATCTTAATATCACCAGCTGCTCCATCTGCCGCTTATAAAATTGGTGAAAAGGTGAACGATCCATTGGCAATGTATGCAGGTGACATCATGACTGTCAATGTTAACTTAGCTGGACTACCTGCATTGGTGTTACCTTGTGGATTTGTTAGAGATGGGTCCTCCGACCTCCCTGTTGGCCTTCAAATGATTGGCGCAGCGTTTGACGAGGGAAAGCTTGTTAAGGTGGGACACATCTTTGAGCAAACTCTTCCAGACTGCAGATTTGTTCCACCTCTACTAGCCGATCACATTGTGGATCGCTGTCCCGTCGGAATCTCGGTCGATCCATTGTTCCGATCTATTCCATCTGTTCGGCGCCGAATCTCCGCTGCTTACGTACTCCTCCGACACCAGATATTGAAAAAGATGTCGGGCCAGACCCAACGTTTGAATGTGGTTCCGACGGTTACAATGCTTGGAGCGATGAAAGCCCGTCTTGTTGGTGCAACCAGAGGTCATGCTCTTCTCAAGAAGAAGAGTGATGCTTTGACTGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCTCAGCTAAGGAATCAATGGGGGAAGTCATGAAGACATCTGCATTTTCTCTCACCGAAGCAAAATATGTTGCTGGTGACAACATCAAGCATATTGTTCTTGAGAATGTCCAAAGTGCCGCTATTAAGATTCGATCTCGGCAGGAGAATATTGCTGGTGTAAAACTCCCAAAATTTGAACATTATTCTGATGGTGAGACCAAGAATGATCTCACAGGGTTAGCCAGGGGTGGACAACAGATCCAGCTGTGTCGAGGCGCCTATGTGAAGGCAATTGAGGTTCTTGTAGAGCTTGCTTCACTTCAGACGTCATTTTTGACTCTTGATGAGGCAATTAAAACCACAAACCGCAGGGTTAATGCTCTGGAGAATGTTGTGAAGCCAAGGATTGAGAATACTATAAGTTACATTAAGGGAGAATTGGATGAGCTGGAAAGGGAAGATTTCTTTAGACTGAAAAAGATACAGGGTTATAAGAGAAGGGAAATTGAGAGGCAACGTATCAATGCCAAGCTATATGCTGAGGAACAACTTGCTGAAAAGATATCCTTGCAGAAGGGCGTTTCCATGACTTCAGCTCACAACTTATTGTCTGCAGCTGCTGAGAAGGACGAGGATATTATTTTTTGA 2556 45.93 MLSTLQPPRYSLSRFPLHLPSKPFFFHSKQTPLSSPYPIANATLTDQIATSASSPSLHSQILSIRHSLLSRQFTATQLAESYLNRLRALEPHLKSFLHVSDSVLSDGREIDDKILRNEELGPLAGVLVGVKDNICTAGMPSTGGSRILDGYRPPFDATAVRRIKELGGIVVGKTNLDEFGMGSTTEASAFQVTANPWDLKRVPGGSSGGSASAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCLGTTVADAGILLHAISGHDTLDATSSKREVHDFTSQFTAVDSLESKPLKGLRIGLIRETLDNGVDGKVSSAIRAAASHLEELGCSINEVSLPSFSLGLPAYYILASSESSSNLARYDGVRYGNQAIADELTGLYQNSRATGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIQKSFKAALDEYDILISPAAPSAAYKIGEKVNDPLAMYAGDIMTVNVNLAGLPALVLPCGFVRDGSSDLPVGLQMIGAAFDEGKLVKVGHIFEQTLPDCRFVPPLLADHIVDRCPVGISVDPLFRSIPSVRRRISAAYVLLRHQILKKMSGQTQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSAKESMGEVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETKNDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRINAKLYAEEQLAEKISLQKGVSMTSAHNLLSAAAEKDEDIIF 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12799292 12805630 + CmaCh11G019480.1 Cma11g01948 304457

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma11g01948 851 ProSitePatterns Amidases signature. 204 235 IPR020556 -
Cma11g01948 851 Hamap Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 64 539 IPR004412 GO:0006412|GO:0030956|GO:0050567
Cma11g01948 851 TIGRFAM gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 66 537 IPR004412 GO:0006412|GO:0030956|GO:0050567
Cma11g01948 851 SUPERFAMILY Amidase signature (AS) enzymes 60 546 IPR036928 -
Cma11g01948 851 Gene3D Amidase signature (AS) domain 56 542 IPR036928 -
Cma11g01948 851 Pfam ATP synthase subunit D 607 798 IPR002699 GO:0046961
Cma11g01948 851 Gene3D - 590 788 - -
Cma11g01948 851 Pfam Amidase 78 527 IPR023631 -
Cma11g01948 851 PANTHER GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A, MITOCHONDRIAL 59 535 - -
Cma11g01948 851 PANTHER TRANSAMIDASE 59 535 IPR000120 GO:0003824
Cma11g01948 851 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 599 801 IPR002699 GO:0046961
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma11g01948 K02433 gatA, QRSL1; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] - csv:101212627 982.245
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00580 Cma-Chr2:3356767 Cma11g01948 Cma-Chr11:12799292 2.45E-178 dispersed
Cma11g01948 Cma-Chr11:12799292 Cma11g01390 Cma-Chr11:9161690 4.90E-33 dispersed
Cma11g01948 Cma-Chr11:12799292 Cma19g01060 Cma-Chr19:8921352 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi12g105 . . . . . Bpe15g00144 . . Cmo11g02028 . . . . . Sed05g1884 . Cpe04g00837 Bhi05g02070 Tan02g0109 Cmetu05g1678 Lac12g0845 Hepe02g0059 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cma11g01948 . Car11g01633 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma12g00603 . 1 1032 Primary Pumps ATPases(2) AT1G10130 79.6 0.0e+00 1590.5
Cma20g00461 CST 1 814 Primary Pumps ATPases(2) AT2G28520 80.9 0.0e+00 1332.0
Cma02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 79.9 0.0e+00 1310.8
Cma12g00431 CST 1 803 Primary Pumps ATPases(2) AT2G28520 62.7 7.5e-295 1010.4
Cma11g01088 . 38 841 Primary Pumps ATPases(2) AT2G28520 62.4 5.0e-291 997.7
Cma19g00683 . 10 941 Primary Pumps ATPases(2) AT2G28520 54.8 1.7e-278 956.1
Cma11g01088 . 34 846 Primary Pumps ATPases(2) AT2G21410 75.8 0.0e+00 1229.9
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT2G21410 73.0 0.0e+00 1194.5
Cma19g00683 . 6 946 Primary Pumps ATPases(2) AT2G21410 66.1 0.0e+00 1189.9
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT2G21410 62.1 4.3e-298 1021.1
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.6 4.7e-297 1017.7
Cma11g01088 . 36 846 Primary Pumps ATPases(2) AT4G39080 76.3 0.0e+00 1225.3
Cma19g00683 . 8 946 Primary Pumps ATPases(2) AT4G39080 66.7 0.0e+00 1189.5
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT4G39080 73.3 0.0e+00 1182.2
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT4G39080 63.4 7.3e-298 1020.4
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.7 1.6e-297 1019.2
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G34720 100.0 2.2e-53 205.7
Cma12g00424 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cma05g00288 CST 2103 2266 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma05g00287 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma12g00425 CST 2 164 Primary Pumps ATPases(2) AT1G75630 80.7 5.5e-66 248.1
Cma01g01395 . 5 165 Primary Pumps ATPases(2) AT1G75630 81.0 7.2e-66 247.7
Cma09g00796 . 2 151 Primary Pumps ATPases(2) AT1G75630 79.3 2.9e-59 225.7
Cma12g00425 CST 1 164 Primary Pumps ATPases(2) AT2G16510 99.4 1.6e-74 276.2
Cma05g00288 CST 2104 2266 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma05g00287 CST 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma01g01395 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 1.3e-73 273.1
Cma12g00424 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cma09g00796 . 3 151 Primary Pumps ATPases(2) AT2G16510 99.3 2.7e-66 248.8
Cma01g01395 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00288 CST 2102 2223 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00287 CST 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma09g00796 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 2.8e-52 201.8
Cma12g00424 . 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.2e-52 200.7
Cma12g00425 CST 2 121 Primary Pumps ATPases(2) AT1G19910 99.2 6.2e-52 200.7
Cma01g01490 . 4 180 Primary Pumps ATPases(2) AT2G25610 82.5 3.8e-71 265.4
Cma12g00314 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.5e-71 264.6
Cma05g00409 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G38920 100.0 6.4e-53 204.1
Cma01g01490 . 8 180 Primary Pumps ATPases(2) AT4G32530 76.8 1.5e-74 276.6
Cma12g00314 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.3e-72 267.3
Cma05g00409 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07810 80.7 0.0e+00 1673.3
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07810 80.4 0.0e+00 1653.3
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1673.7
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07670 80.1 0.0e+00 1652.9
Cma12g00603 . 1 1032 Primary Pumps ATPases(2) AT1G10130 79.6 0.0e+00 1590.5
Cma13g00147 CST 63 1087 Primary Pumps ATPases(2) AT4G00900 66.2 0.0e+00 1333.2
Cma01g00579 CST 22 1045 Primary Pumps ATPases(2) AT4G00900 65.2 0.0e+00 1305.4
Cma04g02008 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma10g01123 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G76030 94.0 9.4e-253 869.8
Cma14g00208 CST 105 212 Primary Pumps ATPases(2) AT3G01390 78.7 5.1e-37 151.0
Cma06g00375 CST 292 399 Primary Pumps ATPases(2) AT3G01390 79.6 5.1e-37 151.0
Cma15g00782 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 1.3e-180 629.8
Cma04g02250 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 4.8e-180 627.9
Cma11g01948 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 1.3e-115 413.3
Cma02g00580 . 67 327 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cma07g00813 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.2 2.4e-207 718.8
Cma14g00502 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.6 3.0e-205 711.8
Cma12g00425 CST 1 164 Primary Pumps ATPases(2) AT2G16510 99.4 1.6e-74 276.2
Cma05g00288 CST 2104 2266 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma05g00287 CST 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma01g01395 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 1.3e-73 273.1
Cma12g00424 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cma09g00796 . 3 151 Primary Pumps ATPases(2) AT2G16510 99.3 2.7e-66 248.8
Cma19g00752 CST 37 526 Primary Pumps ATPases(2) AT4G38510 95.3 1.5e-269 925.6
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT4G38510 94.0 8.7e-254 873.2
Cma14g00746 . 1 184 Primary Pumps ATPases(2) AT1G64200 74.3 4.8e-67 251.5
Cma11g01534 . 1 183 Primary Pumps ATPases(2) AT1G64200 73.7 7.7e-65 244.2
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G20260 93.4 6.8e-251 863.6
Cma20g00461 CST 1 814 Primary Pumps ATPases(2) AT2G28520 80.9 0.0e+00 1332.0
Cma02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 79.9 0.0e+00 1310.8
Cma12g00431 CST 1 803 Primary Pumps ATPases(2) AT2G28520 62.7 7.5e-295 1010.4
Cma11g01088 . 38 841 Primary Pumps ATPases(2) AT2G28520 62.4 5.0e-291 997.7
Cma19g00683 . 10 941 Primary Pumps ATPases(2) AT2G28520 54.8 1.7e-278 956.1
Cma11g01035 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 8.6e-192 666.8
Cma11g01534 . 1 221 Primary Pumps ATPases(2) AT4G11150 76.6 3.3e-86 315.5
Cma14g00746 . 1 209 Primary Pumps ATPases(2) AT4G11150 75.2 1.6e-80 296.6
Cma17g00631 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.9 0.0e+00 1181.4
Cma08g00852 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.1 0.0e+00 1171.4
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G76030 94.0 9.4e-253 869.8
Cma19g00752 CST 37 526 Primary Pumps ATPases(2) AT4G38510 95.3 1.5e-269 925.6
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT4G38510 94.0 8.7e-254 873.2
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G20260 93.4 6.8e-251 863.6
Cma15g00782 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 1.3e-180 629.8
Cma04g02250 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 4.8e-180 627.9
Cma11g01948 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 1.3e-115 413.3
Cma02g00580 . 67 327 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cma11g01534 . 1 221 Primary Pumps ATPases(2) AT4G11150 76.6 3.3e-86 315.5
Cma14g00746 . 1 209 Primary Pumps ATPases(2) AT4G11150 75.2 1.6e-80 296.6
Cma11g01534 . 1 219 Primary Pumps ATPases(2) AT3G08560 67.6 4.2e-73 271.9
Cma14g00746 . 1 210 Primary Pumps ATPases(2) AT3G08560 67.9 2.6e-70 262.7
Cma14g00746 . 1 184 Primary Pumps ATPases(2) AT1G64200 74.3 4.8e-67 251.5
Cma11g01534 . 1 183 Primary Pumps ATPases(2) AT1G64200 73.7 7.7e-65 244.2
Cma04g02008 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma10g01123 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma14g00208 CST 105 212 Primary Pumps ATPases(2) AT3G01390 78.7 5.1e-37 151.0
Cma06g00375 CST 292 399 Primary Pumps ATPases(2) AT3G01390 79.6 5.1e-37 151.0
Cma07g00813 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.2 2.4e-207 718.8
Cma14g00502 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.6 3.0e-205 711.8
Cma20g00461 CST 1 814 Primary Pumps ATPases(2) AT2G28520 80.9 0.0e+00 1332.0
Cma02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 79.9 0.0e+00 1310.8
Cma12g00431 CST 1 803 Primary Pumps ATPases(2) AT2G28520 62.7 7.5e-295 1010.4
Cma11g01088 . 38 841 Primary Pumps ATPases(2) AT2G28520 62.4 5.0e-291 997.7
Cma19g00683 . 10 941 Primary Pumps ATPases(2) AT2G28520 54.8 1.7e-278 956.1
Cma11g01088 . 34 846 Primary Pumps ATPases(2) AT2G21410 75.8 0.0e+00 1229.9
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT2G21410 73.0 0.0e+00 1194.5
Cma19g00683 . 6 946 Primary Pumps ATPases(2) AT2G21410 66.1 0.0e+00 1189.9
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT2G21410 62.1 4.3e-298 1021.1
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.6 4.7e-297 1017.7
Cma11g01088 . 36 846 Primary Pumps ATPases(2) AT4G39080 76.3 0.0e+00 1225.3
Cma19g00683 . 8 946 Primary Pumps ATPases(2) AT4G39080 66.7 0.0e+00 1189.5
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT4G39080 73.3 0.0e+00 1182.2
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT4G39080 63.4 7.3e-298 1020.4
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.7 1.6e-297 1019.2
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G34720 100.0 2.2e-53 205.7
Cma01g01395 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00288 CST 2102 2223 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00287 CST 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma09g00796 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 2.8e-52 201.8
Cma12g00424 . 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.2e-52 200.7
Cma12g00425 CST 2 121 Primary Pumps ATPases(2) AT1G19910 99.2 6.2e-52 200.7
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G38920 100.0 6.4e-53 204.1
Cma12g00424 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cma05g00288 CST 2103 2266 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma05g00287 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma12g00425 CST 2 164 Primary Pumps ATPases(2) AT1G75630 80.7 5.5e-66 248.1
Cma01g01395 . 5 165 Primary Pumps ATPases(2) AT1G75630 81.0 7.2e-66 247.7
Cma09g00796 . 2 151 Primary Pumps ATPases(2) AT1G75630 79.3 2.9e-59 225.7
Cma12g00425 CST 1 164 Primary Pumps ATPases(2) AT2G16510 99.4 1.6e-74 276.2
Cma05g00288 CST 2104 2266 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma05g00287 CST 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma01g01395 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 1.3e-73 273.1
Cma12g00424 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cma09g00796 . 3 151 Primary Pumps ATPases(2) AT2G16510 99.3 2.7e-66 248.8
Cma01g01490 . 8 180 Primary Pumps ATPases(2) AT4G32530 76.8 1.5e-74 276.6
Cma12g00314 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.3e-72 267.3
Cma05g00409 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cma01g01490 . 4 180 Primary Pumps ATPases(2) AT2G25610 82.5 3.8e-71 265.4
Cma12g00314 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.5e-71 264.6
Cma05g00409 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cma11g01035 . 1 351 Primary Pumps ATPases(2) AT3G28710 94.3 7.4e-199 690.3
Cma11g01035 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 8.6e-192 666.8
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07810 80.7 0.0e+00 1673.3
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07810 80.4 0.0e+00 1653.3
Cma13g00147 CST 63 1087 Primary Pumps ATPases(2) AT4G00900 66.2 0.0e+00 1333.2
Cma01g00579 CST 22 1045 Primary Pumps ATPases(2) AT4G00900 65.2 0.0e+00 1305.4
Cma12g00603 . 1 1032 Primary Pumps ATPases(2) AT1G10130 79.6 0.0e+00 1590.5
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1673.7
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07670 80.1 0.0e+00 1652.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007559 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 2 1 1 1 1 2 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma11g01948 Cma_Chr11 FPKM 48.398006 51.275303 52.402275 52.270111 46.515057 45.533108 47.623501 32.316196 35.171635 36.15126