Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma12g00167 | ATGGCTACCGCCCCCTCTCTTCGCGAGGAGAATGTTTACATGGCCAAGCTTGCGGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCTATCGACAAGGAGGAGCTCACCGTCGAGGAGAGAAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGCGCTCGTAGGGCCTCTTGGCGTATTATTTCCTCTATCGAGCAGAAGGAGGAGAGCCGAGGTAATGATCACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATCGAGAGCGAACTCTCTAATATCTGCGATGGAATTCTCAAACTCCTCGATTCCAGACTTATTCCCTCCGCGGCCTCCGGAGATTCCAAGGTATTTTACCTTAAAATGAAAGGCGATTACCATAGATACCTGGCTGAATTCAAAACCGGTGCCGAACGGAAGGAAGCTGCCGAAAGTACCCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCCGAGTTGCCTCCCACGCATCCGATCCGACTTGGATTGGCTCTCAACTTCTCTGTATTCTACTATGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCCATCGCTGAGTTGGATACCCTCGGTGAGGAATCCTACAAGGATAGTACTTTGATTATGCAACTTCTCCGCGATAACCTCACTCTCTGGACCTCGGACATGCAGGACGAGGGTGCGGATGAGATCAAAGAAGCTCCCCCCAAGCGCGAGGAAGAAAAGCAGTAA | 786 | 51.02 | MATAPSLREENVYMAKLAEQAERYEEMVEFMEKVSASIDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDHHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGADEIKEAPPKREEEKQ | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 742588 | 744758 | + | CmaCh12G001670.1 | Cma12g00167 | 304657 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma12g00167 | 261 | ProSitePatterns | 14-3-3 proteins signature 1. | 48 | 58 | IPR023409 | - | |
Cma12g00167 | 261 | PRINTS | 14-3-3 protein zeta signature | 42 | 71 | IPR000308 | - | |
Cma12g00167 | 261 | PRINTS | 14-3-3 protein zeta signature | 91 | 115 | IPR000308 | - | |
Cma12g00167 | 261 | PRINTS | 14-3-3 protein zeta signature | 122 | 144 | IPR000308 | - | |
Cma12g00167 | 261 | PRINTS | 14-3-3 protein zeta signature | 157 | 183 | IPR000308 | - | |
Cma12g00167 | 261 | PRINTS | 14-3-3 protein zeta signature | 184 | 210 | IPR000308 | - | |
Cma12g00167 | 261 | PRINTS | 14-3-3 protein zeta signature | 211 | 240 | IPR000308 | - | |
Cma12g00167 | 261 | ProSitePatterns | 14-3-3 proteins signature 2. | 220 | 239 | IPR023409 | - | |
Cma12g00167 | 261 | MobiDBLite | consensus disorder prediction | 242 | 261 | - | - | |
Cma12g00167 | 261 | Gene3D | - | 2 | 251 | IPR036815 | - | |
Cma12g00167 | 261 | Pfam | 14-3-3 protein | 14 | 238 | IPR023410 | - | |
Cma12g00167 | 261 | Coils | Coil | 7 | 34 | - | - | |
Cma12g00167 | 261 | SUPERFAMILY | 14-3-3 protein | 8 | 240 | IPR036815 | - | |
Cma12g00167 | 261 | PANTHER | 14-3-3-LIKE PROTEIN GF14 CHI-RELATED | 5 | 253 | - | - | |
Cma12g00167 | 261 | SMART | 1433_4 | 8 | 251 | IPR023410 | - | |
Cma12g00167 | 261 | MobiDBLite | consensus disorder prediction | 243 | 261 | - | - | |
Cma12g00167 | 261 | PANTHER | 14-3-3 PROTEIN | 5 | 253 | IPR000308 | - | |
Cma12g00167 | 261 | PIRSF | 14-3-3 | 2 | 250 | IPR000308 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01616 | Cma12g00167 | CCT | |
Cma09g00568 | Cma12g00167 | CCT | |
Cma05g00507 | Cma12g00167 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00442 | Cma-Chr1:2223792 | Cma12g00167 | Cma-Chr12:742588 | 6.93E-162 | dispersed | |
Cma12g00167 | Cma-Chr12:742588 | Cma14g01134 | Cma-Chr14:8781087 | 1.60E-162 | dispersed | |
Cma01g01616 | Cma-Chr1:11112714 | Cma12g00167 | Cma-Chr12:742588 | 8.62E-176 | wgd | |
Cma12g00167 | Cma-Chr12:742588 | Cma05g00507 | Cma-Chr5:2430586 | 0 | wgd | |
Cma12g00167 | Cma-Chr12:742588 | Cma09g00568 | Cma-Chr9:2573521 | 6.07E-176 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma12g00167 | K06630 | - | csv:101220164 | 498.049 |