Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma12g00199 | ATGGTTCATGCTGGTTCTACCCAATTTTCACATAAACTGGGGATTCAAATCGTTCATGGATGCAATAAGTTACATATTAGTGGCAAGGGAAAGACCCGGCTACATCTTGTTACTATCATTCCTACGTCACACGATCTGAGGTATGATCCTGGACGTCTTCAGCTCTTACGCAGTGCAAGTCGTCCAGTGTATCCCATGTCTTCCAGAGCAAATGTTTTTGTGTGTCGATCTGTTCTTGAACCAAGTGGTGGAGGAGCTGGGACTGCTGTTCTAAAAACTGCAGCTTTGGTGCTGACAAGATCTTATGATGCTTTACGCGGAAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGCGTCATTGCCTTTGCTGCTTGGGGTGTTGGACCTCTTATGCGTTTGGGGAGGGTTCTATTTCTTCATGAGCCCGATGGCAGTTGGAAGAAAAGTAATGCATACTATGTTACGACTTCCTACGTTCAGCCTTTACTGCTATGGACAGGAGCTACATTGATCTGCAGGGCATTGGATCCAGTAGTTTTACCGTCAGTAGCCAGTCAGGCCATCAAACAGCGACTTCTAAATTTTGTTCGAGCTTTGTCTACTGTTCTGGCATTTGCCTATTGTATATCAAGCTTGATTCAACAAGTACAAAAATTCGCTACGGAATCAAATGACTCAAGTGATGCTAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCTCTTTCATTGTTCATGGAGTTGCTAGGTTTTTCTACCCAAAAGTGGCTCACAGCTGGGGGTCTTGGTACCGTATTACTTACCCTTGCTGGTCGTGAGATATTTACTAACTTTCTCTCAAGTGTAATGATTCATGCAACACGACCATTTGTGGTAAATGAATGGATTCAGACAAAGATTGATGGATATGAAGTTTCTGGAACGGTTGAGCACGTTGGTTGGTGGTCGCCGACTATTATCCGAGGCGATGATCGTGAAGCAGTCCATATTCCAAATCACAAATTCACCGTTAGTATTGTGAGAAATCTTACTCAGAAGACTCATTGGCGTATCAAAACTCATCTTGCCATCAGCCACTTAGATGTCAACAAGATTAATTATATTGTAGCTGATATGCGGAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGTAGAATCTTCTTGGACAACATCAATCCTGAAAACCAGGCTCTTATGATTATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAGTACTTGTGTGTAAAGGAGGCAATTCTCTTGGACCTTCTCAGGGTTATCAGCCACCATAGGGCCCGGCTTGCCACTCCCATACGCACTGTTCAGAAAATATATGGTGAGGCTGACTTGGAGAATGTACCATTTTCTGAGACCATGTATTCTCGTACAGGGGCTACTAACCGCCCTCTGCTTCTTATTGAGCCATCTTATAAAGTCAATGGTGACGATAAAGCCAAGGTCTCTGGACGTCCTGCTCGCTCATCAAGCGAAGAAAAAGATGCCAAACAAGAGGCAGTCTCAACATCAGGAACGAAAGCCCCCGACACATCAGGAACAACGCCTAAGCCTTCAACTGGATCAGTATCCAACACACAGACCCAGAATCCAACCAGTACTCCAGAACAAAGCAGCAGTGAGAAGCCAGTAACAAGCAATGAGGTAAAAGGAGAAAAGAAAGATCTCACAGGACTGAACGCTAAGGATAATACGCCACGAGGGACTCCTCCCAAATGGTCACTCTCAGCTGCCGGTCCGAGTAGCGAGAAAGCTGATGTTTCTTCCTCGAGCGTGCAGAATAAGCAAGATGGCGAGAAGACCCCTGTGGGCAGACCTCCATTGGAGGAGAACATTGTCCTGGGAGTTGCCTTGGAAGGCTCCAAAAGAACTCTTCCAATAGAGGAAGATCTGAATCCATCTCCCTTTCACTCTCCAGCTGATACAAAAGAAACTTCCACGCAGAGGAATGGGAGTGAGTTTGGTCCAAAGAGCAAGGATATGAAAGATGGGCAGATGCCTGCAGTTCCAGGTGGTACAAAAAAGGAAAAGAAGAGAAAAGAACAGTGTGATGTTGGTGATGGCGAGGAATTAAAACTAATCCTTGATATAACTAGCATGGGTTACATCAACGTTACCCAAATGAATTATCTATCGGTATTAATTAAGCAGATATGGAGCCATTACACTATTGACAGCATGGCAAGCCAAATCCTACTGACATGA | 2268 | 44.27 | MVHAGSTQFSHKLGIQIVHGCNKLHISGKGKTRLHLVTIIPTSHDLRYDPGRLQLLRSASRPVYPMSSRANVFVCRSVLEPSGGGAGTAVLKTAALVLTRSYDALRGSPLLLKLIPAACVIAFAAWGVGPLMRLGRVLFLHEPDGSWKKSNAYYVTTSYVQPLLLWTGATLICRALDPVVLPSVASQAIKQRLLNFVRALSTVLAFAYCISSLIQQVQKFATESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNINPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEADLENVPFSETMYSRTGATNRPLLLIEPSYKVNGDDKAKVSGRPARSSSEEKDAKQEAVSTSGTKAPDTSGTTPKPSTGSVSNTQTQNPTSTPEQSSSEKPVTSNEVKGEKKDLTGLNAKDNTPRGTPPKWSLSAAGPSSEKADVSSSSVQNKQDGEKTPVGRPPLEENIVLGVALEGSKRTLPIEEDLNPSPFHSPADTKETSTQRNGSEFGPKSKDMKDGQMPAVPGGTKKEKKRKEQCDVGDGEELKLILDITSMGYINVTQMNYLSVLIKQIWSHYTIDSMASQILLT | 755 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 935507 | 942820 | - | CmaCh12G001990.1 | Cma12g00199 | 304689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma12g00199 | 755 | MobiDBLite | consensus disorder prediction | 645 | 704 | - | - | |
Cma12g00199 | 755 | MobiDBLite | consensus disorder prediction | 659 | 675 | - | - | |
Cma12g00199 | 755 | MobiDBLite | consensus disorder prediction | 496 | 521 | - | - | |
Cma12g00199 | 755 | MobiDBLite | consensus disorder prediction | 602 | 619 | - | - | |
Cma12g00199 | 755 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC | 1 | 689 | - | - | |
Cma12g00199 | 755 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 689 | IPR045042 | - | |
Cma12g00199 | 755 | Pfam | Mechanosensitive ion channel | 240 | 447 | IPR006685 | GO:0016020|GO:0055085 | |
Cma12g00199 | 755 | Gene3D | - | 299 | 354 | IPR023408 | - | |
Cma12g00199 | 755 | MobiDBLite | consensus disorder prediction | 522 | 566 | - | - | |
Cma12g00199 | 755 | SUPERFAMILY | Sm-like ribonucleoproteins | 283 | 353 | IPR010920 | - | |
Cma12g00199 | 755 | Gene3D | - | 163 | 297 | - | - | |
Cma12g00199 | 755 | MobiDBLite | consensus disorder prediction | 496 | 631 | - | - | |
Cma12g00199 | 755 | MobiDBLite | consensus disorder prediction | 567 | 581 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma12g00199 | Cma-Chr12:935507 | Cma16g00747 | Cma-Chr16:3999600 | 0 | dispersed | |
Cma12g00199 | Cma-Chr12:935507 | Cma05g00546 | Cma-Chr5:2650712 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma12g00199 | K22047 | - | csv:101213477 | 1163.67 |