Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma12g00366 | ATGGCGGCTCTTTCGAAAGCTCTGTTTCTTTTCGTCTTCCTCTTCTTTGGCTTGTCGGAAGCCAGAGAGATCTTGGTCGGAGGCAAAACCAACGCCTGGAAAATCCCTTCTTCTCCAGCTGAATCTCTCAATCAATGGGCCGAAAGCTCCCGGTTTCGTGTCGGCGACACTCTCGTGTGGAATTATGAGGAGGGGAAAGATTCAGTGTTGAAAGTGAGGAAGGAAGATTACGAAGCCTGCAACATTACGAACCCACAAGGGAAACTGGAGGACGGGAACGCCAAGGTGGAGCTTCAGAACCCGGGTCCGATCTATTTCATCAGTGGAGTAAAGGCTCACTGCGAGCAGGGTCTTAAGCTTGTCGTCGTTGTTATGACTCCTCGTCACAGGTTCATTGGCATCTCTCCGGCGCCTTCTCCGGCGGAGATTGAGGCTCCGGCGGTTGCTCCCTCGAGTGGGGCTGCAAGTTTGAAGGTCGGGGTTTTGGCTGTCGTGGTGGGGATTTTGGGAGCTCATATGATTTGGGTTTGA | 531 | 52.73 | MAALSKALFLFVFLFFGLSEAREILVGGKTNAWKIPSSPAESLNQWAESSRFRVGDTLVWNYEEGKDSVLKVRKEDYEACNITNPQGKLEDGNAKVELQNPGPIYFISGVKAHCEQGLKLVVVVMTPRHRFIGISPAPSPAEIEAPAVAPSSGAASLKVGVLAVVVGILGAHMIWV | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 1874711 | 1876151 | + | CmaCh12G003660.1 | Cma12g00366 | 304856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma12g00366 | 176 | ProSiteProfiles | Phytocyanin domain profile. | 22 | 126 | IPR003245 | GO:0009055 | |
Cma12g00366 | 176 | CDD | OsENODL1_like | 22 | 125 | IPR041846 | - | |
Cma12g00366 | 176 | PANTHER | EARLY NODULIN-LIKE PROTEIN 3 | 7 | 169 | - | - | |
Cma12g00366 | 176 | Pfam | Plastocyanin-like domain | 33 | 117 | IPR003245 | GO:0009055 | |
Cma12g00366 | 176 | SUPERFAMILY | Cupredoxins | 21 | 125 | IPR008972 | - | |
Cma12g00366 | 176 | Gene3D | - | 20 | 128 | IPR008972 | - | |
Cma12g00366 | 176 | PANTHER | BLUE COPPER PROTEIN | 7 | 169 | IPR039391 | GO:0009055 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma05g00347 | Cma12g00366 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00944 | Cma-Chr4:4849942 | Cma12g00366 | Cma-Chr12:1874711 | 1.70E-36 | dispersed | |
Cma09g00857 | Cma-Chr9:4202759 | Cma12g00366 | Cma-Chr12:1874711 | 1.54E-27 | dispersed | |
Cma12g00366 | Cma-Chr12:1874711 | Cma16g00852 | Cma-Chr16:5048663 | 6.24E-33 | dispersed | |
Cma12g00366 | Cma-Chr12:1874711 | Cma05g00347 | Cma-Chr5:1531886 | 9.18E-83 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma12g00366 | - | - | csv:101210664 | 232.646 |