Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma12g00435 | ATGGCGGACACGGGCTCGGTCTCGAACAAGAGAATGTCGTGTTCGATCCCCGAGAGGTTCCAGCTCCACGCCGCCATGTTAGCCTTGCAATTCGGCTACGCTGGCTTCCATGTGGTCTCTAGAGCTGCCCTGAATATGGGCATTAGTAAACTCGTCTTCCCTGTCTATCGAAACGTCATCGCTTTGCTCCTCCTCCTTCCCTTTGCATATTTCATGGAAAAGAAGGATAGGCCTGCGCTTACTCTCAACTTTGTTCTTCAGTTCTTCCTCCTCGCTCTCGTTGGAATTACTGCAAATCAAGGGTTTTACTTGTTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAGAATTCTGTCCCGGCCATTACTTTCCTCATGGCTGTACTTCTCCGGATCGAACAAGTTCGACTAAACCGGAAAGATGGGATAGCGAAGGTGGTGGGGACTCTATGCTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGCCCCACCGTCTACAGCCCGGCGACGACAGTGACGGTGCAGAGCACGGCGGAGTCGGCGGGGATGCTGATGGGGCCGGGAATGTTCCCGTCACTAGGCGACGCAAAGGGCAAAAGCTGGACGTTAGGGTGCGTTTACTTGATCGGACACTGCTTGTCGTGGTCGGCGTGGCTGGTTCTACAAGCTCCGGTGCTGAAAAAATACCCGGCTCGACTCTCCGTCACGTCATTCACTTGCTTTTTTGGCCTCGTCCAATTCTTCATCATCGCTGCCGCGTTCGAGCGCGATGCTCAGGCTTGGCTCTTCCATTCCGGCGCCGAAGCCTTCAGCATTGTTTATGCGGGGGTTGTGGCTTCGGGGATAGCGTTCGCCGTACAGATATGGTGCATTGACAGAGGTGGTCCGGTCTTTGTGGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCTCTCATGGCTTCCTTAGCTTTGGGTGAAGAGTTCTACTTGGGAGGGATCATAGGGGCGGTGCTGATTATATCGGGACTGTACCTTGTGCTGTGGGGCAAGAGCGAAGAGAAGAAGCTCTTATTGGAACGGGCAGTAATCCAGTCTGCTCAGGACCATGTTACCAGTAGAACAAGCGGCCACATCAAGCCGTCTCTTAACCAGCCACTCCTGCATCCTACGGCTGAAAATGTTTGA | 1182 | 53.3 | MADTGSVSNKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFMEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVLLRIEQVRLNRKDGIAKVVGTLCCVAGATVITLYKGPTVYSPATTVTVQSTAESAGMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLVQFFIIAAAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASLALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKLLLERAVIQSAQDHVTSRTSGHIKPSLNQPLLHPTAENV | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2275723 | 2278727 | + | CmaCh12G004350.1 | Cma12g00435 | 304925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma12g00435 | 393 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 56 | 166 | - | - | |
Cma12g00435 | 393 | PANTHER | WAT1-RELATED PROTEIN | 14 | 372 | - | - | |
Cma12g00435 | 393 | MobiDBLite | consensus disorder prediction | 372 | 393 | - | - | |
Cma12g00435 | 393 | Pfam | EamA-like transporter family | 26 | 163 | IPR000620 | GO:0016020|GO:0016021 | |
Cma12g00435 | 393 | Pfam | EamA-like transporter family | 208 | 346 | IPR000620 | GO:0016020|GO:0016021 | |
Cma12g00435 | 393 | PANTHER | WAT1-RELATED PROTEIN | 14 | 372 | IPR030184 | GO:0016021|GO:0022857 | |
Cma12g00435 | 393 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 253 | 350 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma09g00126 | Cma12g00435 | CCT | |
Cma09g00126 | Cma12g00435 | ECH | |
Cma05g00275 | Cma12g00435 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g00295 | Cma-Chr11:1465378 | Cma12g00435 | Cma-Chr12:2275723 | 3.70E-144 | dispersed | |
Cma12g00435 | Cma-Chr12:2275723 | Cma15g01342 | Cma-Chr15:8415672 | 1.83E-82 | dispersed | |
Cma09g00766 | Cma-Chr9:3694122 | Cma12g00435 | Cma-Chr12:2275723 | 1.83E-75 | transposed | |
Cma12g00435 | Cma-Chr12:2275723 | Cma05g00275 | Cma-Chr5:1163426 | 0 | wgd | |
Cma12g00435 | Cma-Chr12:2275723 | Cma09g00126 | Cma-Chr9:547880 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma12g00435 | - | - | csv:101210562 | 711.835 |