Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma12g00501 | ATGTCGGTATCCTCCATAACAATCCCTTGTCTTCAACCTTCATGGCGGTTCCCGTCGCAAAAAGCGCCGGCGAGACGTCGTTCAAAGGTGGGCTCTGTTTCTCTACCCAAAATCTATGCGGTGGATCAGTCGTCGCCGTCCGTTCAAACGCCGCAGCGGACGACGAAGCTTCCGTTGAGGAAGATTCCCGGCGACTATGGTCCGCCGGTGCTCGGAGCGTTGAAGGACCGGCAAGACTATTTTTACAATCAGGGGAGAGAAGAGTATTTGAAATCTCGAATGCATCGGTATGAATCCACTGTTTACAGAACCAATATGCCGCCGGGTCCGTTCATCAGTTCCGATCCTCGAGTTGTCGTTTTGCTCGACGGCAAAAGTTTCCCTGTTTTGTTCGACAATTCTAAGGTTGAGAAGAAGGATCTCTTCACCGGAACTTACATGCCTTCAACGGAACTCACCGGCGGCTACCGGGTTCTGTCTTATATTGATCCGTCGGAGCCGATTCACCAGAAGCTTAAGCAACTGCTGTTCTTCCTCCTCAAGTACCGCCGGGATAAAATCCAGCCGGAATTTCACTCTGTTTTTTCAGAGCTTTTCGATACTCTGGAGAAGGATTTGGCCGCCACCGGTAGAGCAAAGTACAATGATCCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGATCTCTCTACGGTGTTAATCCGGCGAATACCAAATTGGGCCAAGACGCTCCGAAATTGATTGGGAAATGGGTTCTGTTCCAGCTTGGCCCTGTTTTAAATCTCGGCCTCCCCAAGTTCGCCGAGGAGCTCCTCCTCCGCACAGTCCGGCTACCACCGGCGCTGGTTAAAGCCGATTACCAGCGGCTTTACGACTTCTTTTACCAGTCGTCGGCTGCGGTGTTTGAAGAAGCCGAGAAATTGGGGATTTCGAGGGAAGAAGCTTGCCATAACTTGCTCTTCGCGACATGTTTCAATTCATTCGGAGGAATGAAGATTTTCTTCCCCAATATGCTCAAATGGCTTGGCCGCGCCGGAGCAACTCTACACGGCCAACTCGCGCAGGAGATTCGTACCGCCGTTAAAGCCCACGGCGGGGAAATCACAATGGCGGCTATGGAACAGATGCCGTTGATGAAATCGGTGGTGTACGAAGTGTTCAGAATCGAGCCGCCGGTGCCAGTTCAGTACGGTCGGGCGAAGCAGGATCTTGTGATAGAAAGCCACGACGCGGCGTTCGAGATCAAAGAAGGGGAAATGATTTGTGGGTATCAGCCATTTGCGACCAGAGATCCGAAAATCTTCGACAGAGCCAACGAATTCGTGCCGGATCGGTTCATCGGTGACGGCGAAAAGTTACTGCAGCACGTGCTCTGGTCAAACGGTCCGGAGACTCAAACGCCGTCACTTAAGGACAAGCAGTGCGTCGGAAAGGACTTTGTCGTTTTCATCTCTCGCCTTCTTCTCGTCGAACTCTTCCTCCGATATGATACCTTCGACGTCGAAGCTGCCGTCTCGCCGTTGGGCGCCGCCGTCACGGTAACTTCCCTGAAGAAGGCAAGCTTTTGA | 1569 | 52.33 | MSVSSITIPCLQPSWRFPSQKAPARRRSKVGSVSLPKIYAVDQSSPSVQTPQRTTKLPLRKIPGDYGPPVLGALKDRQDYFYNQGREEYLKSRMHRYESTVYRTNMPPGPFISSDPRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPSTELTGGYRVLSYIDPSEPIHQKLKQLLFFLLKYRRDKIQPEFHSVFSELFDTLEKDLAATGRAKYNDPGEQAAFNFLARSLYGVNPANTKLGQDAPKLIGKWVLFQLGPVLNLGLPKFAEELLLRTVRLPPALVKADYQRLYDFFYQSSAAVFEEAEKLGISREEACHNLLFATCFNSFGGMKIFFPNMLKWLGRAGATLHGQLAQEIRTAVKAHGGEITMAAMEQMPLMKSVVYEVFRIEPPVPVQYGRAKQDLVIESHDAAFEIKEGEMICGYQPFATRDPKIFDRANEFVPDRFIGDGEKLLQHVLWSNGPETQTPSLKDKQCVGKDFVVFISRLLLVELFLRYDTFDVEAAVSPLGAAVTVTSLKKASF | 522 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2599868 | 2601436 | + | CmaCh12G005010.1 | Cma12g00501 | 304991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma12g00501 | 522 | Pfam | Cytochrome P450 | 352 | 449 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g00501 | 522 | Gene3D | Cytochrome P450 | 53 | 522 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g00501 | 522 | SUPERFAMILY | Cytochrome P450 | 58 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g00501 | 522 | PANTHER | CYTOCHROME P450 26 | 40 | 520 | - | - | |
Cma12g00501 | 522 | PANTHER | ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE | 40 | 520 | - | - | |
Cma12g00501 | 522 | PRINTS | E-class P450 group IV signature | 376 | 392 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g00501 | 522 | PRINTS | E-class P450 group IV signature | 429 | 447 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g00501 | 522 | PRINTS | E-class P450 group IV signature | 475 | 493 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma05g00217 | Cma12g00501 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01781 | Cma-Chr11:11918812 | Cma12g00501 | Cma-Chr12:2599868 | 2.01E-175 | dispersed | |
Cma12g00501 | Cma-Chr12:2599868 | Cma19g00641 | Cma-Chr19:6819021 | 1.97E-177 | dispersed | |
Cma12g00501 | Cma-Chr12:2599868 | Cma05g00217 | Cma-Chr5:915909 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma12g00501 | K01723 | - | csv:101221732 | 866.3 |