Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma12g00501 ATGTCGGTATCCTCCATAACAATCCCTTGTCTTCAACCTTCATGGCGGTTCCCGTCGCAAAAAGCGCCGGCGAGACGTCGTTCAAAGGTGGGCTCTGTTTCTCTACCCAAAATCTATGCGGTGGATCAGTCGTCGCCGTCCGTTCAAACGCCGCAGCGGACGACGAAGCTTCCGTTGAGGAAGATTCCCGGCGACTATGGTCCGCCGGTGCTCGGAGCGTTGAAGGACCGGCAAGACTATTTTTACAATCAGGGGAGAGAAGAGTATTTGAAATCTCGAATGCATCGGTATGAATCCACTGTTTACAGAACCAATATGCCGCCGGGTCCGTTCATCAGTTCCGATCCTCGAGTTGTCGTTTTGCTCGACGGCAAAAGTTTCCCTGTTTTGTTCGACAATTCTAAGGTTGAGAAGAAGGATCTCTTCACCGGAACTTACATGCCTTCAACGGAACTCACCGGCGGCTACCGGGTTCTGTCTTATATTGATCCGTCGGAGCCGATTCACCAGAAGCTTAAGCAACTGCTGTTCTTCCTCCTCAAGTACCGCCGGGATAAAATCCAGCCGGAATTTCACTCTGTTTTTTCAGAGCTTTTCGATACTCTGGAGAAGGATTTGGCCGCCACCGGTAGAGCAAAGTACAATGATCCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGATCTCTCTACGGTGTTAATCCGGCGAATACCAAATTGGGCCAAGACGCTCCGAAATTGATTGGGAAATGGGTTCTGTTCCAGCTTGGCCCTGTTTTAAATCTCGGCCTCCCCAAGTTCGCCGAGGAGCTCCTCCTCCGCACAGTCCGGCTACCACCGGCGCTGGTTAAAGCCGATTACCAGCGGCTTTACGACTTCTTTTACCAGTCGTCGGCTGCGGTGTTTGAAGAAGCCGAGAAATTGGGGATTTCGAGGGAAGAAGCTTGCCATAACTTGCTCTTCGCGACATGTTTCAATTCATTCGGAGGAATGAAGATTTTCTTCCCCAATATGCTCAAATGGCTTGGCCGCGCCGGAGCAACTCTACACGGCCAACTCGCGCAGGAGATTCGTACCGCCGTTAAAGCCCACGGCGGGGAAATCACAATGGCGGCTATGGAACAGATGCCGTTGATGAAATCGGTGGTGTACGAAGTGTTCAGAATCGAGCCGCCGGTGCCAGTTCAGTACGGTCGGGCGAAGCAGGATCTTGTGATAGAAAGCCACGACGCGGCGTTCGAGATCAAAGAAGGGGAAATGATTTGTGGGTATCAGCCATTTGCGACCAGAGATCCGAAAATCTTCGACAGAGCCAACGAATTCGTGCCGGATCGGTTCATCGGTGACGGCGAAAAGTTACTGCAGCACGTGCTCTGGTCAAACGGTCCGGAGACTCAAACGCCGTCACTTAAGGACAAGCAGTGCGTCGGAAAGGACTTTGTCGTTTTCATCTCTCGCCTTCTTCTCGTCGAACTCTTCCTCCGATATGATACCTTCGACGTCGAAGCTGCCGTCTCGCCGTTGGGCGCCGCCGTCACGGTAACTTCCCTGAAGAAGGCAAGCTTTTGA 1569 52.33 MSVSSITIPCLQPSWRFPSQKAPARRRSKVGSVSLPKIYAVDQSSPSVQTPQRTTKLPLRKIPGDYGPPVLGALKDRQDYFYNQGREEYLKSRMHRYESTVYRTNMPPGPFISSDPRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPSTELTGGYRVLSYIDPSEPIHQKLKQLLFFLLKYRRDKIQPEFHSVFSELFDTLEKDLAATGRAKYNDPGEQAAFNFLARSLYGVNPANTKLGQDAPKLIGKWVLFQLGPVLNLGLPKFAEELLLRTVRLPPALVKADYQRLYDFFYQSSAAVFEEAEKLGISREEACHNLLFATCFNSFGGMKIFFPNMLKWLGRAGATLHGQLAQEIRTAVKAHGGEITMAAMEQMPLMKSVVYEVFRIEPPVPVQYGRAKQDLVIESHDAAFEIKEGEMICGYQPFATRDPKIFDRANEFVPDRFIGDGEKLLQHVLWSNGPETQTPSLKDKQCVGKDFVVFISRLLLVELFLRYDTFDVEAAVSPLGAAVTVTSLKKASF 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2599868 2601436 + CmaCh12G005010.1 Cma12g00501 304991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma12g00501 522 Pfam Cytochrome P450 352 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00501 522 Gene3D Cytochrome P450 53 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00501 522 SUPERFAMILY Cytochrome P450 58 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00501 522 PANTHER CYTOCHROME P450 26 40 520 - -
Cma12g00501 522 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 40 520 - -
Cma12g00501 522 PRINTS E-class P450 group IV signature 376 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00501 522 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00501 522 PRINTS E-class P450 group IV signature 475 493 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00217 Cma12g00501 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01781 Cma-Chr11:11918812 Cma12g00501 Cma-Chr12:2599868 2.01E-175 dispersed
Cma12g00501 Cma-Chr12:2599868 Cma19g00641 Cma-Chr19:6819021 1.97E-177 dispersed
Cma12g00501 Cma-Chr12:2599868 Cma05g00217 Cma-Chr5:915909 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma12g00501 K01723 - csv:101221732 866.3