Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma12g00589 ATGAAGCTGCTGCAATGGTTCCTTCTGTTCTTGATTTCATTTGCAGAAGCACAGAAGGAGACTTACATAATTCACATGGATCGAACCGACATGCCACGAGCCTTCGACGATCATTTCCAGTGGTATGATTCTTCTTTGAAGTCAGTTTCTGATTCAGCTCAAATGCTTTATTCCTACAATACAGTGGTTCATGGCTTCTCCACGAGATTGACTGTGGAAGAAGCTAAGTTAATAGAAAAGCAGGAAGGGATTCTTGCTGTTATACCTGAATTGAAGTACGAGCTCCATACGACTCGGACGCCGGAGTTTCTTGGACTTGGGAAGAGTGTCTCGTTCTTCCCAGCATCGGAGAAGGTTGGCGAAGTGATTGTCGGAGTTCTCGACACTGGTGTATGGCCTGAGTTGGAGAGCTTCAATGATGCAGGGTTTGGACCAGTGCCCCCGAGCTGGAAAGGGGAGTGTGAAGTGGGTAAGAACTTTAACTCGTCTAATTGTAACAGGAAATTGATTGGAGCTAGATACTTTTCAAGGGGCTACGAGGCAGCATTTGGCGCAGTTGATGAATCCCAGGAGTCGAAATCACCCAGGGACGACGATGGTCATGGAACTCACACTTCAACGACTGCTGCTGGATCCCCTGCAACCGGAGCTAGCCTCTTTGGGTTTGCTGCAGGGACTGCAAGAGGAATGGCAGCAGAAGCTCGGGTTGCAACGTATAAGGTATGCTGGCTTGGAGGGTGTTTCGGTTCTGATATTTTAGCTGCAATCGACAAGGCTGTTGAAGATGGTGTCAATGTTTTGTCTTTGTCGCTTGGCGGATCATCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCGGCTCAGGGAGTTTTTGTGTCATGTTCTGCTGGGAATAGTGGCCCATCATCCGGTAGCTTGTCGAACGTTGCGCCATGGATAACCACAGTCGGCGCTGGGACTCTCGACAGAGACTTCCCGACATACGTTACTCTTGGAAATGGGAAGAAATTCATCGGGGAGTCGCTATACAGTGGAAAGCCCTTGTCGGACTCTTTAATACCAATTGTATATGCATCCGAAGCGAGTAATTCATCTAGTGGTAGCCTTTGCTTGACCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTCTGTGACAGAGGAGGGAACTCCCGAATCCAGAAAGGGGTGGTGGTGAAAGACGCCGGTGGCGTCGGAATGATTCTAGCCAACACTGACACATACGGAGAGGAACAATTAGCCGATGCACATCTCTTGCCAACGGCGGCCGTTGGTCAAAAAGCCGGCGACGCAATAAAGAACTACATCTCCTCCAACGCGAATCCAACAGCAACGATCAGTAGCAGCACCACGAGATTGGGAGTTCAACCGTCGCCGGTGGTGGCCGCATTCAGTTCTCGAGGCCCTAATTTCCTCACTCCACAGATTCTCAAACCCGATCTAATAGCACCAGGAGTGAACATTCTAGCCGGATGGATCGGTGGCGCCACTCCGGCCGGTTCAGACAGCAGCAAGCCGCGCGTGCCCTTCAACATAATCTCCGGCACATCAATGTCTTGCCCTCACATCAGTGGATTAGCTGCACTTCTGAAAGCTGCTCATCCAGATTGGAGCCCAGCCGCCATTAGATCTGCCTTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCAATTCAAGACGTATCCAAGGGATTACCGGCGACGCCGTTCGGTATAGGAGCCGGACACGTGAATCCAATGGCTGCCCTCGATCCCGGCCTTGTTTACGACACCACCACCAATGACTACTTCGCCTTCCTTTGCGCCCTAAACTACACCTCACTTGAAATCAAAGTAATCACCAAGAAGGACTTCACCTGCAGTGGGAACAAGTACAGATTGGAGGATCTGAACTACCCATCTTTTGCAGTTCCATTGGAGACCCCTTCAATCAGAGGAGACGAAAACGCTGCACCGACCACCATAAAATACACAAGAACACTGACCAACAAAGGCACCCCATCAACATATAAGGCCACTGTGACGTCGAAAAGTCCGTCGGTGAAGATTGTCGTTGAGCCACAAACTCTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACTTTCATTGCTTCTCCAATGCCGTCGGGGACTGAGAGCTTTGCTCGTCTGGAATGGTCAGATGGGAAACACATAGTGGGTAGCCCCATTGCTTTCACCTGGACATAG 2265 49.85 MKLLQWFLLFLISFAEAQKETYIIHMDRTDMPRAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPELKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIVGVLDTGVWPELESFNDAGFGPVPPSWKGECEVGKNFNSSNCNRKLIGARYFSRGYEAAFGAVDESQESKSPRDDDGHGTHTSTTAAGSPATGASLFGFAAGTARGMAAEARVATYKVCWLGGCFGSDILAAIDKAVEDGVNVLSLSLGGSSPDYYRDNVAIGAFSAAAQGVFVSCSAGNSGPSSGSLSNVAPWITTVGAGTLDRDFPTYVTLGNGKKFIGESLYSGKPLSDSLIPIVYASEASNSSSGSLCLTSTLNPAKVAGKIVVCDRGGNSRIQKGVVVKDAGGVGMILANTDTYGEEQLADAHLLPTAAVGQKAGDAIKNYISSNANPTATISSSTTRLGVQPSPVVAAFSSRGPNFLTPQILKPDLIAPGVNILAGWIGGATPAGSDSSKPRVPFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGEAIQDVSKGLPATPFGIGAGHVNPMAALDPGLVYDTTTNDYFAFLCALNYTSLEIKVITKKDFTCSGNKYRLEDLNYPSFAVPLETPSIRGDENAAPTTIKYTRTLTNKGTPSTYKATVTSKSPSVKIVVEPQTLSFAEANEQKSYTVTFIASPMPSGTESFARLEWSDGKHIVGSPIAFTWT 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3069290 3071554 - CmaCh12G005890.1 Cma12g00589 305079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma12g00589 754 CDD Peptidases_S8_3 93 565 IPR034197 -
Cma12g00589 754 SUPERFAMILY Subtilisin-like 95 603 IPR036852 GO:0004252|GO:0006508
Cma12g00589 754 SUPERFAMILY PA domain 380 463 IPR046450 -
Cma12g00589 754 MobiDBLite consensus disorder prediction 186 212 - -
Cma12g00589 754 ProSiteProfiles Serine proteases, subtilase domain profile. 92 599 - -
Cma12g00589 754 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 14 752 - -
Cma12g00589 754 ProSitePatterns Serine proteases, subtilase family, serine active site. 529 539 IPR023828 -
Cma12g00589 754 Gene3D - 616 753 - -
Cma12g00589 754 Gene3D - 327 467 - -
Cma12g00589 754 CDD PA_subtilisin_like 333 460 - -
Cma12g00589 754 PRINTS Subtilisin serine protease family (S8) signature 119 138 IPR015500 -
Cma12g00589 754 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Cma12g00589 754 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Cma12g00589 754 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 96 IPR037045 -
Cma12g00589 754 Pfam Subtilase family 122 575 IPR000209 GO:0006508|GO:0008236
Cma12g00589 754 Pfam PA domain 371 446 IPR003137 -
Cma12g00589 754 Pfam Fibronectin type-III domain 645 750 IPR041469 -
Cma12g00589 754 Pfam Peptidase inhibitor I9 21 96 IPR010259 -
Cma12g00589 754 Gene3D Peptidase S8/S53 domain 122 612 IPR036852 GO:0004252|GO:0006508
Cma12g00589 754 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 752 IPR045051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00150 Cma12g00589 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00804 Cma-Chr8:4855511 Cma12g00589 Cma-Chr12:3069290 0 dispersed
Cma12g00589 Cma-Chr12:3069290 Cma16g00169 Cma-Chr16:739332 0 dispersed
Cma12g00589 Cma-Chr12:3069290 Cma03g00941 Cma-Chr3:6733609 0 wgd
Cma12g00589 Cma-Chr12:3069290 Cma05g00150 Cma-Chr5:661618 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma12g00589 - - csv:101207099 1248.03