Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma12g00615 ATGGCTAATTGGTGGAGAAAAGAGAGCCATAAAGGAACCCCTGTTGTTGTAAAGATGGAGAATCCCAACTGGTCAATGGTCGAGCTTCAAGGCCCTTCCGATGATGACTTCATTATCGCCGCTGAGTCGCCGCCGGGTAGAATCCGAGAGAAAGGACGAGGGAAAAACGCCAAGCAACTCACTTGGGTTCTTCTTCTTAAAGCTCACAAGGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGGTCAACATCGGCGCTGCTGTTAAACGCCGTGTTGCTTCCGGTAAAACCGATGCCGACCTCGACAACAACAATGACAACGCCGACAGCGGCGTGAGGGAAAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATTAAGATTTTCCTTTGGGTGTCGGTGGGTCTGTTAGGGTTTGAAGTGGCGGCGTATTACAAGGGCTGGCATTTTAGGGCACCCCATCTTGAATTGAATTACTTTTGGGCATACCCATTTGGGGTTAAGGATGTTTTTGATTGGATTTACTCGAAATGGGTTGTGATTCGTGTGGATTATTTTGCTCCTCCTCTCCAGTTTTTGGCCAATGCTTGTATAGTGTTGTTCCTCATTCAAACTCTGGATAGGTTGATTCTTTGTTTGGGTTGTTTCTGGATCCGCTTCAAGAAAATCAAACCGGTTCCTAATGCTTCGGCGTTCGATCTTGAATCTGGAGAAACTGGTTACTCCCCTATGGTTCTTGTTCAGATCCCAATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTAGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTCGACGACTCGGATGATCCAATCACCATATTGCTGATCCAGGAGGAGGTTCGTAAATGGCAGCAACTCGACGCCAACATCGTGTACCAACATAGGGTGATTCGAGAGGGGTATAAGGCAGGCAATCTTAAGTCTGCCATGAGTTGCAGCTATGTCAAAGACTATGAATTTGTTGCTATCTTTGATGCTGATTTTCAGCCTGCCTCTGATTTCCTTAAAAGAACACTTCCTCATTTTAAGGATAATGAGGAACTTGGACTCGTTCAAGCGCGGTGGTCGTTCGTTAACAAGGACGAGAACTTGTTAACCCGATTGCAGAACATTAACTTAGCCTTCCATTTCGAGGTTGAGCAACAGGTTAATGGAGTTTTTCTTAATTTCTTTGGATTCAATGGCACTGCTGGTGTTTGGAGGATTAAGGCTCTTGAAGAAGCCGGTGGATGGCTGGAAAGAACCACGGTTGAGGACATGGACATTGCCGTTCGTGCTCATCTTCATGGTTGGAAATTCATATTCCTCAACGATGTAGAGTGCCAATGTGAATTACCCGAATCGTATGAAGCGTATAGAAAACAACAGCACCGGTGGCATTCTGGACCGATGCAATTATTTCGTCTTTGTTTGCCTGATATCGTTCGATCAAAGATTGGCATATGGAAGAAATTCAACTTGATATTCCTGTTCTTTCTACTACGAAAGCTGATATTACCGTTTTATTCGTTTACTCTTTTCTGCATTATTCTTCCAATGACGATGTTCGTTCCCGAAGCCGAGTTACCTGCGTGGGTCGTATGTTACATTCCAGCCACCATGTCTTTTCTCAACATTCTTCCAGCACCAAAGTTCTTCCCTTTCATTGTCCCTTACCTCCTTTTCGAGAACACAATGTCGGTAACAAAGTTCAATGCAATGGTTTCGGGACTTTTTCAACTCGGCAGTGCATACGAATGGGTCGTTACGAAGAAATCAGGTCGATCCTCCGAGGGTGATCTCGTCTCAATGGTCGGGAAAAAAGAGTTGAACACTGAAAAGAGTGCATCAGCTAACAACCTTGAGGAGATTGAGTTAATACAAAAACAGGACAAGAAGTTGTCAAAGAAGAAGCATAATAGAATATACATGAAGGAACTAGCATTGGCTTTCCTTCTCCTAACAGCCTCAGCTAGAAGCCTTCTCTCAGCTCAAGGGATTCATTTCTACTTCTTGATGTTCCAAGGAATATCCTTTCTCCTCATCGGTCTCGACTTGATCGGCGAGCAGGTTGTTTGA 2109 44.43 MANWWRKESHKGTPVVVKMENPNWSMVELQGPSDDDFIIAAESPPGRIREKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVNIGAAVKRRVASGKTDADLDNNNDNADSGVRENPTVKTRFYLFIKIFLWVSVGLLGFEVAAYYKGWHFRAPHLELNYFWAYPFGVKDVFDWIYSKWVVIRVDYFAPPLQFLANACIVLFLIQTLDRLILCLGCFWIRFKKIKPVPNASAFDLESGETGYSPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITILLIQEEVRKWQQLDANIVYQHRVIREGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPASDFLKRTLPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLVSMVGKKELNTEKSASANNLEEIELIQKQDKKLSKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLMFQGISFLLIGLDLIGEQVV 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3241272 3244506 - CmaCh12G006150.1 Cma12g00615 305105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma12g00615 702 PANTHER - 8 701 - -
Cma12g00615 702 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 8 701 - -
Cma12g00615 702 Pfam Glycosyl transferase family group 2 338 534 IPR001173 -
Cma12g00615 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 461 IPR029044 -
Cma12g00615 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 524 IPR029044 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma09g00311 Cma12g00615 CCT
Cma01g01758 Cma12g00615 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00615 Cma-Chr12:3241272 Cma15g00318 Cma-Chr15:1478058 0 dispersed
Cma01g01758 Cma-Chr1:11830948 Cma12g00615 Cma-Chr12:3241272 0 wgd
Cma12g00615 Cma-Chr12:3241272 Cma09g00311 Cma-Chr9:1283079 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma12g00615 - - csv:101203245 1256.12