Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma12g00636 ATGTTGAAGGTTTCCTCCTCATCTGACTGCATTTCCATCTTCATCTCTCTCCTTCTCCTCTCACTTCCTTCCACCGCTCTCGCCCTCTCCGACGCAGATCACCCGGTTCTCGCTAACGCTACTCTCCAATCCAGTAATGTATCCAGTCCGAGGAATAAGGAGGGTAGTTTCGCTGACATCATTGATCGTGCTTTGGAGAATGAGTTCAAAGAGAATGACCAGAATGAAGCAACTGATGCAGGAGGCTTCAACAACAGCGTAGCAGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATGGAGCTGAAGACACTCCTACATTGATTGATCGGAAGGACAATGTCTTTATCATATCTAACTTCAAGTCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGGCCTGGAGGATTTAATTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTGGCACAATTTGGTGTAGTTTTTCTTCTTTTTGCACTGGGGTTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCAGTCCTTGGTGGCCTGGTCCAAATTATCCTATTTATGTGCCTCAGTGGGATCATAGCCTCGTCATGCGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCATTTCTATCAATGTCCTCAACGGCAGTGGTGCTGAAATTTTTGATGGAAAAGAATTCAACAAATGCTCTTCATGGACAAGTCACGATCGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTTTTTGCTTTGCTTCCAGTGCTGGGTGGGAATTCTGGTATTCTTCAGGGAGTGATATCCATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTTGGGTTGTTTTGTCAATTTTATCCCGTACATGTATTCCTTGGTTCTTAAAATTGATGATAAGTCTATCATCACAGACCAACGAACTCTATCAATTAGCATCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGCTCCTTTGCTGCTGGAGTTATGATATCAACAACTGATCTTGCTCAACATACCTTCGAACAAATAGAGCCTATAAGGAACTTCTTTGCGGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCAACGTTCAGTTTTTGTGGAACCATGTTGATATATTGCTTGCAACTGTTATACTAGTAATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGATACAACAGCAGGACGTCACTTTTGGTTGGAATGTCTCTGGCTCAGATAGGGGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTAGAGGGAAAACTGTATCTGTTGCTTATTGGGACCACAGCCCTTAGTCTGGTTACAACTCCTCTTCTCTTCAAGCTGATACCTGCTGTAGTGCACTTAGGCGTGCTATTGCGGTGTTTCTCTCCAGACGGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGAGTTATGTTGATAGTTCAGGGACCTCATGATTCATGA 1746 43.24 MLKVSSSSDCISIFISLLLLSLPSTALALSDADHPVLANATLQSSNVSSPRNKEGSFADIIDRALENEFKENDQNEATDAGGFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNGAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVVFLLFALGLEFSTTKLRVVRAVAVLGGLVQIILFMCLSGIIASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKVLVILVTFWVVLSILSRTCIPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTFEQIEPIRNFFAALFLASIGMLINVQFLWNHVDILLATVILVIIVKTIVISTVVKGFGYNSRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPLLFKLIPAVVHLGVLLRCFSPDGLVEIGFKGDIIRSDSVKQRVMLIVQGPHDS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3375519 3385440 - CmaCh12G006360.1 Cma12g00636 305126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma12g00636 581 Pfam Sodium/hydrogen exchanger family 163 532 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cma12g00636 581 Gene3D - 156 539 IPR038770 -
Cma12g00636 581 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 22 581 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cma12g00636 581 PANTHER K(+) EFFLUX ANTIPORTER 6 22 581 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g00684 Cma12g00636 CCT
Cma10g00712 Cma12g00636 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00684 Cma-Chr11:3318342 Cma12g00636 Cma-Chr12:3375519 0 dispersed
Cma12g00636 Cma-Chr12:3375519 Cma18g01197 Cma-Chr18:9499886 0 dispersed
Cma10g00712 Cma-Chr10:3201645 Cma12g00636 Cma-Chr12:3375519 0 wgd
Cma12g00636 Cma-Chr12:3375519 Cma05g00096 Cma-Chr5:411737 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma12g00636 - - csv:101217282 959.133