Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma12g00737 ATGGTGGGGAAGCCTAGCTCGGTTTCCTTCAGGGTTCCGTACCGGAACCTCCAGGATGCGGAAGTAGAGATGGTGGCTGTCGATGAACAGCAGCTCCAAGGGATTGATCTCAATTCTCCTTCTTCTAGTAGATGTGCCAATGGAAGCCCAGACGGTTCGTCGTCAACGCCTCATGTTAGATCTACGCCAAATAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCCGGTGTTCAATTTGGTTGGGCATTACAGCTCTCCTTACTAACTCCCTATATTCAGACACTTGGAATCGAGCATGCATTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTTGGTATATGGAGTGATAAGTGTTCTTCAAAGTATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTAGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGATATATACTAGGAGATACGAAGGAACATTGCAGAGTATATAAGGGTACACGAACAAGGGCAGCTATTATTTTTGTAATAGGCTTTTGGATGCTTGATCTTGCAAACAATACAGTGCAGGGTCCTGCCCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCAGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGTGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTATCGCTGTGGTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCCATGAAGTTCCACTTACTGCTGTAGATCAACTACCACGTTTATCAGATTCTGCTCCTCTGTTGAATGGGAATGAACAAAGTAGTCCTAATATTGTAAAATCGGAGCTTAACAGTCCAAATGGGAGCAATGACAACTATGGCTATCAAAAAGATGTGAATTTGGAAATTTCAAAATCAATAATTGAGGAAAATCACAGTGAAAGTTATTACGATGGTCCTGCAACAGTGGTAGTCAAATTGTTAACCAGTTTAAGGCATTTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTTGATACGGATTGGATGGGAAGGGAAGTGTACCATGGGGACCCAAAAGGAAGTTTGACTGATGAACAGGTGTATGATCAGGGTGTCAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTCATAGAGCCGATGTGTCAGCGCATGGGAGCAAGACTTGTCTGGGCAATAAGCAACTTTATTGTGTTTGCATGCATGACGGGAACTACTATTATCAGTTTAATATCTGTCAGCCAATACTCTGAAGGAATCGAACACGTTATAGGAGGAAACTCAACAATAAAAAATGCTTCCTTGGCTGTTTTTGTTCTTCTTGGTTTTCCTCTTGCTATAACTTATAGCGTTCCCTTCTCTTTGACAGCAGAATTGACTGCTGATTCTGGTGGTGGCCAAGGATTGGCTATAGGAGTTCTCAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCACTGGGTGCTGGGCCATGGGATGCATTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTGTTTGTGCGCTTGCGGCTGGAGTTGTTGCGCTTCTTAGATTGCCTGATCACACCAACAGTTCTTTCAAATCCACAGGTTTTCATTTTGGTTGA 1815 42.64 MVGKPSSVSFRVPYRNLQDAEVEMVAVDEQQLQGIDLNSPSSSRCANGSPDGSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTKEHCRVYKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLIAVVFLTICTLVTIYFAHEVPLTAVDQLPRLSDSAPLLNGNEQSSPNIVKSELNSPNGSNDNYGYQKDVNLEISKSIIEENHSESYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTDEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAISNFIVFACMTGTTIISLISVSQYSEGIEHVIGGNSTIKNASLAVFVLLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASVCALAAGVVALLRLPDHTNSSFKSTGFHFG 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4506858 4512711 - CmaCh12G007370.1 Cma12g00737 305227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma12g00737 604 MobiDBLite consensus disorder prediction 306 330 - -
Cma12g00737 604 MobiDBLite consensus disorder prediction 36 59 - -
Cma12g00737 604 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 39 604 - -
Cma12g00737 604 PANTHER SUGAR TRANSPORTER 39 604 - -
Cma12g00737 604 SUPERFAMILY MFS general substrate transporter 54 591 IPR036259 -
Cma12g00737 604 CDD MFS_SLC45_SUC 69 586 - -
Cma12g00737 604 Pfam Major Facilitator Superfamily 78 393 IPR011701 GO:0022857|GO:0055085
Cma12g00737 604 Gene3D MFS general substrate transporter like domains 62 587 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00228 Cma-Chr12:1123406 Cma12g00737 Cma-Chr12:4506858 1.59E-151 dispersed
Cma12g00737 Cma-Chr12:4506858 Cma05g00896 Cma-Chr5:6943697 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma12g00737 K15378 - csv:101205348 1071.61