Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma12g00908 | ATGGTGGGGAATTTCCAGCCCACGGTTCTTGTGTTTCTGGCAATTCTTGTTGTTGGGAAGGCGGAAATTTACATTGTCACAATTGATGGAGAACCTATTGTGAGTTACAAAGGTGATCTTGATGGATTTGAGGCCACTGCAGTGGAATCTGATGAAAAGATCGACTCTACCAGTGAAATTGTGACATCCTATTCTCGTCACCTTGAAAATAAACATGATATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAACATCTCATCAATGGATTTGCTGTTGACATCTCGCACGAGCAGGCAGAGACTCTAAGACACACGCCAATTGTAAAATCTGTGGAGAGGGACTGGAAGGTTAGGAAACTAACAACACATACACCGGAGTTTTTGGGTCTTCCAACAGGCGTATGGCCAACCGGCGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATATATCCACACCATCCAAGTTTTGCTACCTATAATACCGAACCTTTCGGGCCATGTTCGAAGTATAAAGGGAAATGTGAAGTTGACCCCAACACCAAGAAGAATTTTTGTAATGGAAAGATCGTTGGAGCTCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCTTCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACTGCAGCAATTGCAGCTGGAAACAATGGAATCCCTGTGAGACTGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCTCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGAGGATTTGTTGCTGATGTAGTGGCAGCTATCGATCAGGCTGTACATGATGGGGTCGATATTCTGAGTCTTTCGGTGGGGCCAAATAGTCCTCCTGCAACTACAAAGATCACATATTTAAACCCTTTTGATGCTACCCTTCTTTCAGCTGTGAAGGCTGGCGTCTTTGTTGCGCAAGCTGCTGGGAATGGAGGCCCATTTCCTAAAACATTGGTGTCCTATAGTCCATGGATAGCCACTGTGGCTGCTGCCATTGATGACAGAAGATACAAAAACCATCTGACACTTGGTAATGGAAAAATCCTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAATCGAACGTACACATTGGTCGCAGCTAACGACGTTCTGTTAGATTCTTCAGTAAGGAAGTCCAGCCCCTCTGACTGCCAAAGGCCAGAAGTTCTAAACAAACGACTGGTTGAAGGGAAGGTTCTTCTTTGTGGCTATTCATTCAGTTTTGTTGTTGGTACCGCTTCAGTCAAGAAGGTCGCTCAAACTGCAAAAGCCCTTGGTGCTGCTGGCTTTGTTCTTGCTGTTGAAAACGTCTCTCCTGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTTTAACTGATGTCACCAAGTCGATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACAGGTCGGGTCAAGAGCTTTGACGCTGTGGGTAGCATTGGTGATGGTTTGATGCCTTTATTGTACAAATCAGCTCCTGAGGTTGCATTGTTTTCTGCTCGTGGGCCAAATATTAGAGACTTCAGCTTTCAGGATGCTGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTCTGATATGGGCTGCTTGGTCTCCAAATGGTACAGACGAACCTAACTATGTTGGAGAGGCATTTGCTATGATTTCTGGAACGAGCATGGCAGCACCGCATATAGCCGGTATAGCAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCTGCAGCCATCAAATCGGCCTTGATGACGACATCAACGACAATGGACAGAGCAGGAAGACCTCTTAAAGCACAACAATTTTCCGAAACAGAAGTCATGAAACTAGTATCTGCAACGCCTTTCGATTACGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCTGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACGACAGCAGGCATCAACGTGCACGAGATACACAACTATACTAACTCACCCTGCAACTTCACCATGGGACATCCCTGGAATCTAAACAGCCCATCAATTACCATCGCCCATCTTGTGGGAACTAAGACTGTTACTCGCACAGTAACAAATGTTGCTGAGGAAGAAACCTATACAGTTACTGCAAGAATGGACCCTGCTATTGCCATAGAAACAAATCCTCCAGCAATGACTCTACGATCTGGGTCGTCGAGAAAATTTTCAGTAACTCTCACAGCTCGTTCACAGACTGGAACATATAGTTTTGGCGAGGTTGTATTGAAGGGCAGTAGGGGCCACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA | 2451 | 45.25 | MVGNFQPTVLVFLAILVVGKAEIYIVTIDGEPIVSYKGDLDGFEATAVESDEKIDSTSEIVTSYSRHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDISHEQAETLRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPNTKKNFCNGKIVGAQHFAEAAKAAGAFNPSIHFASPLDGDGHGSHTAAIAAGNNGIPVRLHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVRKSSPSDCQRPEVLNKRLVEGKVLLCGYSFSFVVGTASVKKVAQTAKALGAAGFVLAVENVSPGAKFDPVPVGIPGILLTDVTKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEAFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEVMKLVSATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGTKTVTRTVTNVAEEETYTVTARMDPAIAIETNPPAMTLRSGSSRKFSVTLTARSQTGTYSFGEVVLKGSRGHKVRIPVVAMGYQR | 816 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6963550 | 6969548 | - | CmaCh12G009080.1 | Cma12g00908 | 305398 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma12g00908 | 816 | Gene3D | - | 690 | 813 | - | - | |
Cma12g00908 | 816 | Pfam | Fibronectin type-III domain | 718 | 810 | IPR041469 | - | |
Cma12g00908 | 816 | Pfam | Peptidase inhibitor I9 | 24 | 126 | IPR010259 | - | |
Cma12g00908 | 816 | Pfam | Subtilase family | 153 | 634 | IPR000209 | GO:0006508|GO:0008236 | |
Cma12g00908 | 816 | SUPERFAMILY | Subtilisin-like | 128 | 677 | IPR036852 | GO:0004252|GO:0006508 | |
Cma12g00908 | 816 | Gene3D | - | 368 | 533 | - | - | |
Cma12g00908 | 816 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 14 | 815 | IPR045051 | - | |
Cma12g00908 | 816 | PANTHER | CUCUMISIN-RELATED | 14 | 815 | - | - | |
Cma12g00908 | 816 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 122 | 673 | - | - | |
Cma12g00908 | 816 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 596 | 606 | IPR023828 | - | |
Cma12g00908 | 816 | PRINTS | Subtilisin serine protease family (S8) signature | 153 | 172 | IPR015500 | - | |
Cma12g00908 | 816 | PRINTS | Subtilisin serine protease family (S8) signature | 232 | 245 | IPR015500 | - | |
Cma12g00908 | 816 | PRINTS | Subtilisin serine protease family (S8) signature | 595 | 611 | IPR015500 | - | |
Cma12g00908 | 816 | CDD | PA_subtilisin_like | 375 | 513 | - | - | |
Cma12g00908 | 816 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 128 | IPR037045 | - | |
Cma12g00908 | 816 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 158 | 169 | IPR023827 | - | |
Cma12g00908 | 816 | SUPERFAMILY | Protease propeptides/inhibitors | 85 | 126 | - | - | |
Cma12g00908 | 816 | Gene3D | Peptidase S8/S53 domain | 155 | 686 | IPR036852 | GO:0004252|GO:0006508 | |
Cma12g00908 | 816 | CDD | Peptidases_S8_3 | 129 | 632 | IPR034197 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma05g00712 | Cma12g00908 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g01472 | Cma-Chr3:9160989 | Cma12g00908 | Cma-Chr12:6963550 | 0 | dispersed | |
Cma07g00037 | Cma-Chr7:249454 | Cma12g00908 | Cma-Chr12:6963550 | 0 | dispersed | |
Cma12g00908 | Cma-Chr12:6963550 | Cma10g00769 | Cma-Chr10:3535963 | 7.77E-112 | dispersed | |
Cma16g00551 | Cma-Chr16:2835858 | Cma12g00908 | Cma-Chr12:6963550 | 4.74E-08 | transposed | |
Cma18g00570 | Cma-Chr18:3838893 | Cma12g00908 | Cma-Chr12:6963550 | 0 | transposed | |
Cma12g00908 | Cma-Chr12:6963550 | Cma05g00712 | Cma-Chr5:3783766 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma12g00908 | - | - | csv:101219351 | 1560.04 |