Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma12g00931 ATGACCATGGCGCATTCACCAACAAAGTTTGCATTCCTTAGCTTAGTTTCTCTACTAGTTTTGGGGTTGCTCACCAAGTTCTTGTTCATCTCCTTAAACATCCTTTTAATCACTCTTACCATTGCTTTTGTCTTTGCTATCATACTCTTCTCCAATTTCTCCAATACTCCTCCTGGTCCTCTCCCTATTCCTATCTTCGGGAACTGGCTCCAAGTCGGGAACGACCTCAACCATCGTGTTCTTGCGTCGTTAGCGCAAAAATATGGCTCGGTGTTCCGACTCAAACTCGGCTACAAGAATCTAGTTGTGGTGTCTGATGCTGAGCTTGCTAGACAAGTTCTTCATGCTCAAGGTGCGGAGTTTGGCTCTCGTCCTCGAAATGTCGTCTTCGACATTTTCACTAATAATGGACAAGATATGGTGTTCACGATTTATGGTGAGCATTGGCGTAAAATGCGTAGAATCATGACACAACCACTTTTTACAAACAATGTTGTGCATACCTATAGTGGTATGTGGGAGGAAGAAATGGAATTGGTTGTTCGTGATCTTAAGAATAACTCGAAGGTGAGATCGGAAGGGTTAGTCATAAGAAAGCCCTTGCAATTGATGATGTACAATATCATGTACCGAATGATGTTTGATTCGAAGTTTGAATCTCAAGACGATCCTTTATACATTGAGGCGACTCGATTGAACTCGGAAAGAATGCGATTGGCACAAAGTTCGGAATATAATTATGGAGATTTCATTCCTTTCCTCAGACCCTTTTTGAGGGGTTACTTGAACAAGTGCAAGGAGTTGAGAAATGAGAGGTTGGCATTTTTCAACATTAACTATGTTGAGAAGAGAAGAAAAATTATGGAAGCTAACGGAGACGAGCACAAAACAAGTTGCGCCATAGATCATATTATAAACGCTCAACTAAAAGGAGAGATTAATGAAGAAAATGTTTTATACATCATAGAAAACATCAACGTTGCAGCAATACAGACAACACTTCGATCAATGGAGTGGGCAATAGTCGAGTTGGTGAATCATCCAACCTTTCAGCAAAAAATTCGAGACGAACTCTCAACGATCTTAAAAGAAATGAAAGTCACACCATCGAACTTACATGAGTTACCCTATCTACAAGCCGTAGTGAAAGAGACATTGAGACTACGCATACCGGTACCATTGTTAGTACCACATATGAACTTAAAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAGGAGTCTAAGGTGATGGTGAATGCATGGTGGTTGGGCAATAACCCGGCATGGTGGAAAAATCCAGAAGAGTTCAGGCCAGAGAGGTTCCTTCAAGAAGAAAGTAGCACAGAAGTTACAGTAGGAGGTAACGTCGACTTTCGACTCATACCATTTGGCATCGGAAGGAGAAGTTGCCCCGGGATCGTTGTGGCAATGCCAATCTTGGGAATGTTCATTGCTAAGTTGGTAACCAATTTTGAAATGAAGCCTCCAAATGGGATGGAGAAGATTGATGTGCAAGAAAAAGGAGGACCATTTAGTTTGTATATTGCGAACCCGTCGACTGTGGCATTTGAACCTATAAGTGTTTAG 1590 41.64 MTMAHSPTKFAFLSLVSLLVLGLLTKFLFISLNILLITLTIAFVFAIILFSNFSNTPPGPLPIPIFGNWLQVGNDLNHRVLASLAQKYGSVFRLKLGYKNLVVVSDAELARQVLHAQGAEFGSRPRNVVFDIFTNNGQDMVFTIYGEHWRKMRRIMTQPLFTNNVVHTYSGMWEEEMELVVRDLKNNSKVRSEGLVIRKPLQLMMYNIMYRMMFDSKFESQDDPLYIEATRLNSERMRLAQSSEYNYGDFIPFLRPFLRGYLNKCKELRNERLAFFNINYVEKRRKIMEANGDEHKTSCAIDHIINAQLKGEINEENVLYIIENINVAAIQTTLRSMEWAIVELVNHPTFQQKIRDELSTILKEMKVTPSNLHELPYLQAVVKETLRLRIPVPLLVPHMNLKEAKLGGYTIPKESKVMVNAWWLGNNPAWWKNPEEFRPERFLQEESSTEVTVGGNVDFRLIPFGIGRRSCPGIVVAMPILGMFIAKLVTNFEMKPPNGMEKIDVQEKGGPFSLYIANPSTVAFEPISV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7220212 7222971 - CmaCh12G009310.1 Cma12g00931 305421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma12g00931 529 Gene3D Cytochrome P450 51 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 Pfam Cytochrome P450 57 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PANTHER OS02G0467000 PROTEIN 3 528 - -
Cma12g00931 529 SUPERFAMILY Cytochrome P450 57 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma12g00931 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Cma12g00931 529 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 3 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00931 Cma-Chr12:7220212 Cma20g00305 Cma-Chr20:1493472 0 dispersed
Cma12g00931 Cma-Chr12:7220212 Cma05g00731 Cma-Chr5:4119909 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma12g00931 K00487 - csv:101205775 854.744