Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma12g01226 | ATGGTGGGTGGCGTTTTGGAGTGGATTAAAGTTTCGATTTTGGGCTGTTTTTTGGTGGTGGTGGCGCTGAGAGCGGCGGTGGTGCTATGGTGGCGGCCGAGGAAAATCGAAGACCATTTTTTCCGGCAAGGAATTAGAGGACCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCATTCTTTTCCTAATTTTTCTCATAACATTCTTCCTCGTGTTCTTCCGTTTTATCATCACTGGAAGAAGATTTATGGTTCGAAATTTTTGGTGTGGTTCGGGCCGACGGTGAGATTAGCGGTGTCTGATCCGGACCTCATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCACCCACTGGTTAAACAGCTAGAAGGTGATGGCCTCCTCAGCCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATCATCTCTCCTTCTTTCCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTCGTGGAAATGTTGGAGAAATGGTCAGCAATGTCAGCAGCTTCCGGTGAGGTGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACCGAAGACGTCATCACTAGGACCGCCTTTGGCTCCAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCTCAACAAATGGTCCTTGCTTCTCAAGCCTTTGAGAAAGTTTTCATCCCTGGCTACAGATTCTTACCGACAAGAACGAACGTGAATTCGTGGAGACTGGATCGAGAAATAAGGAAATCGTTGTTGAAACTGATCGACCGACGTCGGGAGAGCTCGATCGAGAGCTCAAAGGATTTACTAGGGCTAATGATAAGGGCATCAAACACTTCTCCTTCATCAACTATCACTGTTAATGACATTGTTGAAGAGTGCAAGGGGTTCTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCCATGCACCCACAATGGCAGGTAAAGGCACGTGATGAGGTACTAAGGGAGTGTGGAGCACGTGACATACCCTCCAAAGATGATATTACAAAGCTTAAAACGTTGAGTATGATTGTCAATGAATCGTTACGGTTATACCCACCGACAGTGGCAACTATTCGACAAGCAAAAGCTGACGTGGAGCTTGGTGGTTACATGATTCCTCGTGGCACTGAACTGTTGATTCCAATTTTAGCAGTCCATCATGATCAAAAGATATGGGGGAATGATGTGAATGAGTTCAATCCAGGGAGATTTACTGAAGGAGTGGCTAGGGCAGCCAATCATCGAGTTGGATTCATTCCATTTGGACTTGGAGCTCGAACCTGTATCGGCCAAAACTTGGCTATATTGCAAGCAAAATTGGCTCTTGCAATCATACTTCAAAGATTCTCCTTTCGATTGGGACCTTCTTATCAGCACGCACCAGCAGTACAGATGCTACTTTATCCACGATATGGCGCACCAATTATCTTCCAAAAATTATCCACTCCATCGATCCCACAAGATCAACGATCATGA | 1575 | 44.63 | MVGGVLEWIKVSILGCFLVVVALRAAVVLWWRPRKIEDHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDHSFPNFSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVEMLEKWSAMSAASGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDREIRKSLLKLIDRRRESSIESSKDLLGLMIRASNTSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVKARDEVLRECGARDIPSKDDITKLKTLSMIVNESLRLYPPTVATIRQAKADVELGGYMIPRGTELLIPILAVHHDQKIWGNDVNEFNPGRFTEGVARAANHRVGFIPFGLGARTCIGQNLAILQAKLALAIILQRFSFRLGPSYQHAPAVQMLLYPRYGAPIIFQKLSTPSIPQDQRS | 524 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 9549605 | 9552737 | - | CmaCh12G012260.1 | Cma12g01226 | 305716 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma12g01226 | 524 | Pfam | Cytochrome P450 | 87 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | SUPERFAMILY | Cytochrome P450 | 45 | 511 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PANTHER | CYTOCHROMEA2 | 7 | 508 | - | - | |
Cma12g01226 | 524 | Gene3D | Cytochrome P450 | 30 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | E-class P450 group I signature | 92 | 111 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | E-class P450 group I signature | 208 | 226 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma12g01226 | 524 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 7 | 508 | - | - | |
Cma12g01226 | 524 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506|GO:0016705 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g00573 | Cma12g01226 | CCT | |
Cma05g01311 | Cma12g01226 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g01055 | Cma-Chr10:6520871 | Cma12g01226 | Cma-Chr12:9549605 | 5.24E-132 | dispersed | |
Cma11g00556 | Cma-Chr11:2693602 | Cma12g01226 | Cma-Chr12:9549605 | 0 | dispersed | |
Cma12g01226 | Cma-Chr12:9549605 | Cma18g01090 | Cma-Chr18:8964506 | 6.10E-126 | dispersed | |
Cma09g00342 | Cma-Chr9:1407434 | Cma12g01226 | Cma-Chr12:9549605 | 3.02E-35 | transposed | |
Cma10g00573 | Cma-Chr10:2620518 | Cma12g01226 | Cma-Chr12:9549605 | 0 | wgd | |
Cma12g01226 | Cma-Chr12:9549605 | Cma05g01311 | Cma-Chr5:9941119 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma12g01226 | K15639 | - | csv:101208789 | 928.317 |