Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00032 ATGGTTGACAACGGCGAGGAGAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGTAACGAGTCCATGGCTGATGATATTCTTCACATTTTCTCCAATTTTGATGCTAGGTTTTCCCTCGATAAGTTGTCTGATAAGCCCGATGAGCTTGATCCCAGAGGCTCCGCCGATTTGCACCGCTCTCTCAAGTCTTTGGACCGCAGGATCTCCCAATACTTGGTCGCCGACCATCCAATTTGGGCTGACTCCGCCGATTCCTCTGCGTTTCTTGACGCTATCGATGAGTTGATGGCAATCATTAGGGACTGGACGCCGATGGCTAGGGATAAGTCTGTTGGCAACTACCTTGCTCGCGCTGACGATCTGATGCAGCAGGCGATGTTACGCGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAACTTACTCGTCATTTCAGGAACGGCGAGTCAACTGGTGATTTCTGCTTCGATTCTGAGGAAGATGAGGATGTTGCGGAAGGAATTCTTGGCGATGGTCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTACAATATCGTTATCGACGCGCTCCCGTCGGGGACTATCGGCGATCTCCATGAGATAGCGAAGCGTATGGTTGCGGCTGGGTTCGAGAAGGAGTGCTCGCACGCATACAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGATTACAGAAATTGAGCATCGATGAAGTTCAAAAGATGCAATGGCATGACCTTGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTAGCGTCTCCCTTCGAGTTCTCTTCCCAAGCGAACGACACCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCACCGCTAATCTCTCTTTCATGGAGGTCTGTCGAGGATCGACGATCCAGCTATTGAATTTTGCAGATGCGGTGGCAATTGGCTCCCGAGCCCCAGAACGACTCTTCAAAATTATCGATATGTTCGAAACCTTGAGAGACTTGATGCCAGAGTTCGATTCAGTATTTCCAGACCAGTACTGTTCGTTTCTTAGAAATGAAGCACTCACAATCTGGAAAAGTTTTGGCGGAACAATCAAGGGGATCTTCATGGAGCTTGAGAATTTGATCCGTCGTGATCCGGCTAAGACTCCGGTACCGGGGGGCGGCCTTCATCCAATCACTCGATATGTGATGAATTACCTTAGAGCAGCCTGTAAATCGCGGCAGACTCTGGAGCAAATTTTCGAAGAAGTCGCTCTTACCTCCAAGGACTACAGCAAGCTCGAGGACAGAGCAGCAGCATCGTCATCATCGTTGTCAGTTCAAATGGAGTGGATTATGGAGGTTTTAGAGAGCAACTTAGAGGCGAAGTCCAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTCCAGAAAGTGAAAGACAGTGAATTAGGATCAGTTTTAGGTGAGGATTGGATTCGAAAGCACTCCGTTAAGAACCGGCAATACCTTGGGAATTACCTGAGAAGCTCATGGAGCAAGGTGATCGGAGTGTTGAAAATGGAGAGTGGCTCTTTAGCTCCGGCTGCGATGAAGGACAAGCTCCAATCATTCAACGTGCAGTTTGAACAAGTCTGCCAAACCCAATCCACATGGGTGATATTCGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTTGCCAAAACCCTGTTGCCAGCATATCAAAAGTTCGTCGGAAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACAGACCGGTATTTGAAGTACACGGTGGAGGATGTGGAGGGTCGAATCACCGAGCTGTTCGAAGGAGGAGGCGGCGGCGGCAGTAGGAGATTGGCCAATGAGTTGAGATCTGATCTGATCCAAATTGGCCTCCACAGATTCCTGTTTTATGGATCCAATTCGGCCAAGAAGACGACGATCCTAAAGGAATCGCAACAAACA 2010 49.65 MVDNGEEKLLAMARHIAKTMGRNESMADDILHIFSNFDARFSLDKLSDKPDELDPRGSADLHRSLKSLDRRISQYLVADHPIWADSADSSAFLDAIDELMAIIRDWTPMARDKSVGNYLARADDLMQQAMLRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEDVAEGILGDGLQIPVAQPVTDYNIVIDALPSGTIGDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWHDLEEEIERWMKAISVSLRVLFPSERHLCERVFVGLSSTANLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKIIDMFETLRDLMPEFDSVFPDQYCSFLRNEALTIWKSFGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLRAACKSRQTLEQIFEEVALTSKDYSKLEDRAAASSSSLSVQMEWIMEVLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLRSSWSKVIGVLKMESGSLAPAAMKDKLQSFNVQFEQVCQTQSTWVIFEHQLREEARISVAKTLLPAYQKFVGRYQSLPELAKRTDRYLKYTVEDVEGRITELFEGGGGGGSRRLANELRSDLIQIGLHRFLFYGSNSAKKTTILKESQQT 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 383306 385531 - CmaCh13G000320.1 Cma13g00032 305859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00032 670 Pfam Exo70 exocyst complex subunit 266 620 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma13g00032 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 624 IPR004140 GO:0000145|GO:0006887
Cma13g00032 670 SUPERFAMILY Cullin repeat-like 83 624 IPR016159 -
Cma13g00032 670 Gene3D Exocyst complex component Exo70 82 630 - -
Cma13g00032 670 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 624 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00707 Cma13g00032 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00032 Cma-Chr13:383306 Cma13g00803 Cma-Chr13:6823642 2.32E-126 dispersed
Cma01g00707 Cma-Chr1:3710679 Cma13g00032 Cma-Chr13:383306 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00032 K07195 - csv:101204511 1118.99