Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00147 ATGACATACACCATGCAAGAGAGGGAGAAGCGGAAGCCTTTGCTCGTCAAGGATCCTGGAATTTTGGATAAATTGATTTTTCTTTTGGATTTCTGTATCCGCCCAACGTGTTTGCTATTAGAAATGGGTAGAGGGGGGGAAAACTACGGGAAGAAAGACATTTTTGCTGCTACATCTTCGAAGAAAGAAACGTACCCTGCCTGGGCAAGGGATGTTCAAGAATGCGTAGAGAAGTACCAAGTGAATCCAGATCTCGGATTATCTTCTGAAGAGGTCGAAAACAAGAGAAAGATCTATGGTTTCAATGAATTGGAGAAGCATGAAGGTACCTCAATCTGGAAACTTATTTTGGAACAATTTAATGACACACTAGTTAGGATTCTATTAGCTGCAGCAGTTGTATCTTTTGTTCTTGCATGGTATGATGGTGAGGAAGGTGGTGAGATGGAGATCACCGCATTTGTGGAGCCTCTAGTTATTTTCTTGATACTGATCGTAAATGCCATTGTTGGCATTTGGCAAGAGAACAATGCTGAGAAAGCATTGGAAGCCCTTAAAGAAATCCAGTCTGAACAGGCTTCAGTTATACGAAATGGTAAACGAGTTTCGATTGTTGCAAAAGATCTTGTTCCCGGTGATATAGTAGAACTCAGAGTTGGGGATAAGGTGCCTGCTGACATGCGAGTATTGCGTTTAATCAGCTCAACTTTTCGGGTAGAGCAAGGTTCCTTGACAGGCGAGAGTGAAGCGGTGAGCAAGACTGCTAAGGCAGTGCCAGAAGATACCGATATACAAGGGAAAAAGTGTATGGTTTTTGCAGGGACAACAGTTGTCAATGGAAATTGCATTTGCGTTGTTACCCAAATAGGAATGAACACTGAACTAGGACAGGTGCATGCTCAGATACAAGAAGCATCTCAGAGTGAAGATGATACGCCATTGAAGAAAAAGCTGAATGAGTTTGGAGAGCTTCTAACGGCAATAATTGGAGTGATCTGTGCTCTAGTTTGGCTTATTAATGTCAAATACTTCCTCACTTGGGAATATGTTGATGGGTGGCCTGCAAATTTCAAGTTCTCATTTGAGAAATGTACATATTACTTTGAGATTGCTGTGGCATTGGCTGTAGCTGCAATTCCAGAAGGTTTGCCTGCAGTCATAACAACATGCTTGGCACTTGGCACTCGAAAGATGGCTCAAAAGAATGCCCTTGTTCGGAAGCTGCCCAGTGTTGAAACACTTGGCTGTACAACTGTGATATGTTCTGATAAGACCGGTACTCTAACAACTAATCAGATGGCTGTGGCAAAAATTGTGGCCCTTGGTTCTCGTGTTGGCACTCTGCGAGCTTTTGATGTGGAGGGGACTACATATGATCCTTTAGATGGAAGGATAATTGGTTGGCTTGGAGGTCAACTGGATGCTAATCTACAAATGTTGGCAAAGATCGCTGCTGTCTGTAATGATGCAGGTGTTGAAAAATCTGGCCATCATTTTGTTGCAAATGGAATGCCTACTGAAGCAGCATTGAAGGTTCTGGTGGAAAAGATGGGGCTTCCTGAAGGATATGACTCAAGTTCAGCTGACATTAATGGGGATGTCCTGCGATGCTGCCACGCTTGGAATAAGAACGAGCAACGCATTGCTACTCTAGAGTTTGACCGAGACCGTAAATCCATGGGAGTTATAACAACTTCTAGCTCAGGGAAGAAATCATTACTCGTGAAGGGTGCTGTTGAAAACCTTTTGGATCGGAGTTCATTTATTCAACTGCTTGATGGAACTATAGTGAAGTTGGACTCAGATTCGAAGAGATGCCTCTTAGATTATTTGCGTGAGATGTCATCAAGTGCACTAAGGTGTTTAGGTTTTGCCTACAAGGAAGATCTTCCAGAATTTTCCACTTATAATAACGGTGATGAAGAACATCCAGCACACCAGCTTCTACTTGACCCGTCCAAATACTCCACAATTGAAAGTAATCTTATCTTTGCGGGCTTTGTTGGGTTAAGGGATCCTCCTCGAAAAGAGGTTCATCAAGCAATTGAAGACTGCAAAGCTGCTGGTATTCGTGTCATGGTTATCACAGGGGACAACCAGAATACAGCTGAAGCTATATGTCGAGAAATAGGCGTATTTGGAAAACATGAAGCTATAAATTCCAGAAGTTTAACTGGAAAAGAGTTCATGGCAATGAATCGGGAGGGTCAAAAACTTCATTTAAGACAAGATGGAGGACTTCTTTTCTCAAGGGCTGAACCAAGACATAAACAAGAGATAGTGAGATTGCTCAAGGAAGACGGTGAAGTTGTTGCAATGACCGGTGATGGAGTCAATGATGCGCCTGCCTTGAAGCTGGCTGATATCGGTATTGCGATGGGCATTGCTGGTACCGAGGTTGCAAAGGAAGCCTCCGACATGGTTCTTGCAGATGACAATTTTAGTACAATAGTTGCAGCGGTTGGTGAAGGCAGGTCCATTTACGACAATATGAAGGCGTTTATCAGGTACATGATTTCCTCGAATATTGGTGAAGTTGCATCAATATTTTTGACAGCAGCACTGGGTATCCCCGAAGGGATGATCCCTGTTCAGCTTCTCTGGGTTAATCTCGTTACAGACGGACCCCCAGCAACTGCATTGGGATTTAATCCACCAGATAATGATATAATGAAGAAACCGCCAAGAAAGAGTGACGACTCGTTGATCACAGCCTGGATTTTGTTCCGCTATTTGGTGATTGGACTTTACGTAGGGGTAGCAACTGTAGGAGTGTTTATTATTTGGTATACACATGCATCATTCTTGGGCATCGACCTGTCTGGAGATGGTCATAGTCTGGTCTCTTACTCTCAGCTCGCTAACTGGGGTCAGTGCTCATCTTGGGATGGGTTTTCGGTGTCGCCCTTCACAGCTGGGGATGAAGTCTTCAGCTTTGATTCGGATCCATGCGATTACTTCCGCTCAGGCAAGATCAAAGCATCAACACTATCACTCTCCGTCTTGGTAGCCATAGAGATGTTCAATTCCCTCAATGCCCTCTCCGAGGATGGAAGCTTGTTGACAATGCCCCCTTGGGTTAACCCTTGGCTCCTCCTCGCCATGTCTGTTTCGTTCGGCTTGCATTTCTTGATTCTGTATGTGCCATTCCTTGCCAAGATCTTTGGCATCGTCCCGCTGTCGTTGAACGAATGGCTCTTGGTTCTGGCGGTGGCATTGCCCGTGATCATAATCGACGAGATTCTGAAATTCGTGGGAAGGCTTACAAGTGGGTTGAGGACTTCTCACCCGAGGAGATCATCGAAGCAGAAATCAGAGTAA 3321 44.26 MTYTMQEREKRKPLLVKDPGILDKLIFLLDFCIRPTCLLLEMGRGGENYGKKDIFAATSSKKETYPAWARDVQECVEKYQVNPDLGLSSEEVENKRKIYGFNELEKHEGTSIWKLILEQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQENNAEKALEALKEIQSEQASVIRNGKRVSIVAKDLVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTAKAVPEDTDIQGKKCMVFAGTTVVNGNCICVVTQIGMNTELGQVHAQIQEASQSEDDTPLKKKLNEFGELLTAIIGVICALVWLINVKYFLTWEYVDGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDPLDGRIIGWLGGQLDANLQMLAKIAAVCNDAGVEKSGHHFVANGMPTEAALKVLVEKMGLPEGYDSSSADINGDVLRCCHAWNKNEQRIATLEFDRDRKSMGVITTSSSGKKSLLVKGAVENLLDRSSFIQLLDGTIVKLDSDSKRCLLDYLREMSSSALRCLGFAYKEDLPEFSTYNNGDEEHPAHQLLLDPSKYSTIESNLIFAGFVGLRDPPRKEVHQAIEDCKAAGIRVMVITGDNQNTAEAICREIGVFGKHEAINSRSLTGKEFMAMNREGQKLHLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDNDIMKKPPRKSDDSLITAWILFRYLVIGLYVGVATVGVFIIWYTHASFLGIDLSGDGHSLVSYSQLANWGQCSSWDGFSVSPFTAGDEVFSFDSDPCDYFRSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKIFGIVPLSLNEWLLVLAVALPVIIIDEILKFVGRLTSGLRTSHPRRSSKQKSE 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1081823 1088929 + CmaCh13G001470.1 Cma13g00147 305974

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00147 1106 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Cma13g00147 1106 PRINTS P-type cation-transporting ATPase superfamily signature 798 810 - -
Cma13g00147 1106 PRINTS P-type cation-transporting ATPase superfamily signature 774 793 - -
Cma13g00147 1106 PRINTS P-type cation-transporting ATPase superfamily signature 666 677 - -
Cma13g00147 1106 PRINTS P-type cation-transporting ATPase superfamily signature 688 698 - -
Cma13g00147 1106 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Cma13g00147 1106 SFLD p-type atpase 402 826 IPR044492 -
Cma13g00147 1106 Gene3D - 86 303 - -
Cma13g00147 1106 Gene3D - 431 673 IPR023299 GO:0000166
Cma13g00147 1106 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 428 670 IPR023299 GO:0000166
Cma13g00147 1106 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Cma13g00147 1106 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 45 1105 - -
Cma13g00147 1106 Gene3D - 418 819 IPR023214 -
Cma13g00147 1106 Pfam Cation transporting ATPase, C-terminus 859 1085 IPR006068 -
Cma13g00147 1106 Pfam haloacid dehalogenase-like hydrolase 418 788 - -
Cma13g00147 1106 Pfam Cation transporter/ATPase, N-terminus 68 135 IPR004014 -
Cma13g00147 1106 SFLD Haloacid Dehalogenase 402 826 - -
Cma13g00147 1106 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 748 858 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma13g00147 1106 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 159 348 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma13g00147 1106 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 360 442 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma13g00147 1106 SMART Cation_ATPase_N_a_2 66 140 IPR004014 -
Cma13g00147 1106 Gene3D - 118 1087 - -
Cma13g00147 1106 Pfam E1-E2 ATPase 188 401 - -
Cma13g00147 1106 SUPERFAMILY HAD-like 419 878 IPR036412 -
Cma13g00147 1106 SUPERFAMILY Calcium ATPase, transmembrane domain M 66 1087 IPR023298 -
Cma13g00147 1106 PANTHER CALCIUM-TRANSPORTING ATPASE 45 1105 - -
Cma13g00147 1106 SUPERFAMILY Calcium ATPase, transduction domain A 190 300 IPR008250 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00147 K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] - csv:101206729 1996.48
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma01g00579 Cma13g00147 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00147 Cma-Chr13:1081823 Cma05g00724 Cma-Chr5:4038867 1.99E-109 dispersed
Cma12g00603 Cma-Chr12:3149699 Cma13g00147 Cma-Chr13:1081823 0 transposed
Cma01g00579 Cma-Chr1:3004890 Cma13g00147 Cma-Chr13:1081823 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g367 . . Bda02g00797 Bda09g01488 Bpe01g00156 . . . Cmo13g00152 . Cma01g00579 Cma13g00147 Car01g00528 Car13g00117 Sed01g1060 . Cpe20g00800 Bhi08g00646 Tan01g2494 Cmetu12g0878 . Hepe10g1192 . Lcy11g0222 . . . . . . . Cone1ag0679 . Cone18ag0318 Cone11ag1268 Lsi02g01380 . . . Blo13g01094 Blo14g00140 . . Bpe08g00127 . Bma07g00120 Bma11g00140 . . . . . . . . . . . . . . . . Cla03g00170 Cam03g0179 Cec03g0176 Cco03g0186 Clacu03g0182 Cmu03g0800 Cre03g0492 . Csa01g02374 Chy12g00153 Cme12g00230
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma12g00603 . 1 1032 Primary Pumps ATPases(2) AT1G10130 79.6 0.0e+00 1590.5
Cma20g00461 CST 1 814 Primary Pumps ATPases(2) AT2G28520 80.9 0.0e+00 1332.0
Cma02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 79.9 0.0e+00 1310.8
Cma12g00431 CST 1 803 Primary Pumps ATPases(2) AT2G28520 62.7 7.5e-295 1010.4
Cma11g01088 . 38 841 Primary Pumps ATPases(2) AT2G28520 62.4 5.0e-291 997.7
Cma19g00683 . 10 941 Primary Pumps ATPases(2) AT2G28520 54.8 1.7e-278 956.1
Cma11g01088 . 34 846 Primary Pumps ATPases(2) AT2G21410 75.8 0.0e+00 1229.9
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT2G21410 73.0 0.0e+00 1194.5
Cma19g00683 . 6 946 Primary Pumps ATPases(2) AT2G21410 66.1 0.0e+00 1189.9
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT2G21410 62.1 4.3e-298 1021.1
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.6 4.7e-297 1017.7
Cma11g01088 . 36 846 Primary Pumps ATPases(2) AT4G39080 76.3 0.0e+00 1225.3
Cma19g00683 . 8 946 Primary Pumps ATPases(2) AT4G39080 66.7 0.0e+00 1189.5
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT4G39080 73.3 0.0e+00 1182.2
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT4G39080 63.4 7.3e-298 1020.4
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.7 1.6e-297 1019.2
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G34720 100.0 2.2e-53 205.7
Cma12g00424 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cma05g00288 CST 2103 2266 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma05g00287 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma12g00425 CST 2 164 Primary Pumps ATPases(2) AT1G75630 80.7 5.5e-66 248.1
Cma01g01395 . 5 165 Primary Pumps ATPases(2) AT1G75630 81.0 7.2e-66 247.7
Cma09g00796 . 2 151 Primary Pumps ATPases(2) AT1G75630 79.3 2.9e-59 225.7
Cma12g00425 CST 1 164 Primary Pumps ATPases(2) AT2G16510 99.4 1.6e-74 276.2
Cma05g00288 CST 2104 2266 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma05g00287 CST 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma01g01395 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 1.3e-73 273.1
Cma12g00424 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cma09g00796 . 3 151 Primary Pumps ATPases(2) AT2G16510 99.3 2.7e-66 248.8
Cma01g01395 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00288 CST 2102 2223 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00287 CST 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma09g00796 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 2.8e-52 201.8
Cma12g00424 . 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.2e-52 200.7
Cma12g00425 CST 2 121 Primary Pumps ATPases(2) AT1G19910 99.2 6.2e-52 200.7
Cma01g01490 . 4 180 Primary Pumps ATPases(2) AT2G25610 82.5 3.8e-71 265.4
Cma12g00314 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.5e-71 264.6
Cma05g00409 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G38920 100.0 6.4e-53 204.1
Cma01g01490 . 8 180 Primary Pumps ATPases(2) AT4G32530 76.8 1.5e-74 276.6
Cma12g00314 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.3e-72 267.3
Cma05g00409 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07810 80.7 0.0e+00 1673.3
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07810 80.4 0.0e+00 1653.3
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1673.7
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07670 80.1 0.0e+00 1652.9
Cma12g00603 . 1 1032 Primary Pumps ATPases(2) AT1G10130 79.6 0.0e+00 1590.5
Cma13g00147 CST 63 1087 Primary Pumps ATPases(2) AT4G00900 66.2 0.0e+00 1333.2
Cma01g00579 CST 22 1045 Primary Pumps ATPases(2) AT4G00900 65.2 0.0e+00 1305.4
Cma04g02008 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma10g01123 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G76030 94.0 9.4e-253 869.8
Cma14g00208 CST 105 212 Primary Pumps ATPases(2) AT3G01390 78.7 5.1e-37 151.0
Cma06g00375 CST 292 399 Primary Pumps ATPases(2) AT3G01390 79.6 5.1e-37 151.0
Cma15g00782 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 1.3e-180 629.8
Cma04g02250 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 4.8e-180 627.9
Cma11g01948 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 1.3e-115 413.3
Cma02g00580 . 67 327 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cma07g00813 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.2 2.4e-207 718.8
Cma14g00502 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.6 3.0e-205 711.8
Cma12g00425 CST 1 164 Primary Pumps ATPases(2) AT2G16510 99.4 1.6e-74 276.2
Cma05g00288 CST 2104 2266 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma05g00287 CST 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma01g01395 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 1.3e-73 273.1
Cma12g00424 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cma09g00796 . 3 151 Primary Pumps ATPases(2) AT2G16510 99.3 2.7e-66 248.8
Cma19g00752 CST 37 526 Primary Pumps ATPases(2) AT4G38510 95.3 1.5e-269 925.6
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT4G38510 94.0 8.7e-254 873.2
Cma14g00746 . 1 184 Primary Pumps ATPases(2) AT1G64200 74.3 4.8e-67 251.5
Cma11g01534 . 1 183 Primary Pumps ATPases(2) AT1G64200 73.7 7.7e-65 244.2
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G20260 93.4 6.8e-251 863.6
Cma20g00461 CST 1 814 Primary Pumps ATPases(2) AT2G28520 80.9 0.0e+00 1332.0
Cma02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 79.9 0.0e+00 1310.8
Cma12g00431 CST 1 803 Primary Pumps ATPases(2) AT2G28520 62.7 7.5e-295 1010.4
Cma11g01088 . 38 841 Primary Pumps ATPases(2) AT2G28520 62.4 5.0e-291 997.7
Cma19g00683 . 10 941 Primary Pumps ATPases(2) AT2G28520 54.8 1.7e-278 956.1
Cma11g01035 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 8.6e-192 666.8
Cma11g01534 . 1 221 Primary Pumps ATPases(2) AT4G11150 76.6 3.3e-86 315.5
Cma14g00746 . 1 209 Primary Pumps ATPases(2) AT4G11150 75.2 1.6e-80 296.6
Cma17g00631 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.9 0.0e+00 1181.4
Cma08g00852 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.1 0.0e+00 1171.4
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G76030 94.0 9.4e-253 869.8
Cma19g00752 CST 37 526 Primary Pumps ATPases(2) AT4G38510 95.3 1.5e-269 925.6
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT4G38510 94.0 8.7e-254 873.2
Cma19g00752 CST 41 526 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cma11g01365 CST 37 494 Primary Pumps ATPases(2) AT1G20260 93.4 6.8e-251 863.6
Cma15g00782 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 1.3e-180 629.8
Cma04g02250 . 1 376 Primary Pumps ATPases(2) AT1G12840 82.7 4.8e-180 627.9
Cma11g01948 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 1.3e-115 413.3
Cma02g00580 . 67 327 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cma11g01534 . 1 221 Primary Pumps ATPases(2) AT4G11150 76.6 3.3e-86 315.5
Cma14g00746 . 1 209 Primary Pumps ATPases(2) AT4G11150 75.2 1.6e-80 296.6
Cma11g01534 . 1 219 Primary Pumps ATPases(2) AT3G08560 67.6 4.2e-73 271.9
Cma14g00746 . 1 210 Primary Pumps ATPases(2) AT3G08560 67.9 2.6e-70 262.7
Cma14g00746 . 1 184 Primary Pumps ATPases(2) AT1G64200 74.3 4.8e-67 251.5
Cma11g01534 . 1 183 Primary Pumps ATPases(2) AT1G64200 73.7 7.7e-65 244.2
Cma04g02008 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma10g01123 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cma14g00208 CST 105 212 Primary Pumps ATPases(2) AT3G01390 78.7 5.1e-37 151.0
Cma06g00375 CST 292 399 Primary Pumps ATPases(2) AT3G01390 79.6 5.1e-37 151.0
Cma07g00813 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.2 2.4e-207 718.8
Cma14g00502 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.6 3.0e-205 711.8
Cma20g00461 CST 1 814 Primary Pumps ATPases(2) AT2G28520 80.9 0.0e+00 1332.0
Cma02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 79.9 0.0e+00 1310.8
Cma12g00431 CST 1 803 Primary Pumps ATPases(2) AT2G28520 62.7 7.5e-295 1010.4
Cma11g01088 . 38 841 Primary Pumps ATPases(2) AT2G28520 62.4 5.0e-291 997.7
Cma19g00683 . 10 941 Primary Pumps ATPases(2) AT2G28520 54.8 1.7e-278 956.1
Cma11g01088 . 34 846 Primary Pumps ATPases(2) AT2G21410 75.8 0.0e+00 1229.9
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT2G21410 73.0 0.0e+00 1194.5
Cma19g00683 . 6 946 Primary Pumps ATPases(2) AT2G21410 66.1 0.0e+00 1189.9
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT2G21410 62.1 4.3e-298 1021.1
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.6 4.7e-297 1017.7
Cma11g01088 . 36 846 Primary Pumps ATPases(2) AT4G39080 76.3 0.0e+00 1225.3
Cma19g00683 . 8 946 Primary Pumps ATPases(2) AT4G39080 66.7 0.0e+00 1189.5
Cma12g00431 CST 1 808 Primary Pumps ATPases(2) AT4G39080 73.3 0.0e+00 1182.2
Cma20g00461 CST 9 818 Primary Pumps ATPases(2) AT4G39080 63.4 7.3e-298 1020.4
Cma02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.7 1.6e-297 1019.2
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G34720 100.0 2.2e-53 205.7
Cma01g01395 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00288 CST 2102 2223 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma05g00287 CST 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.6e-52 202.6
Cma09g00796 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 2.8e-52 201.8
Cma12g00424 . 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.2e-52 200.7
Cma12g00425 CST 2 121 Primary Pumps ATPases(2) AT1G19910 99.2 6.2e-52 200.7
Cma12g00424 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma12g00425 CST 27 164 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma01g01395 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00288 CST 2129 2266 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma05g00287 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cma09g00796 . 28 151 Primary Pumps ATPases(2) AT4G38920 100.0 6.4e-53 204.1
Cma12g00424 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cma05g00288 CST 2103 2266 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma05g00287 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.9e-66 249.6
Cma12g00425 CST 2 164 Primary Pumps ATPases(2) AT1G75630 80.7 5.5e-66 248.1
Cma01g01395 . 5 165 Primary Pumps ATPases(2) AT1G75630 81.0 7.2e-66 247.7
Cma09g00796 . 2 151 Primary Pumps ATPases(2) AT1G75630 79.3 2.9e-59 225.7
Cma12g00425 CST 1 164 Primary Pumps ATPases(2) AT2G16510 99.4 1.6e-74 276.2
Cma05g00288 CST 2104 2266 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma05g00287 CST 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 5.9e-74 274.2
Cma01g01395 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 1.3e-73 273.1
Cma12g00424 . 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cma09g00796 . 3 151 Primary Pumps ATPases(2) AT2G16510 99.3 2.7e-66 248.8
Cma01g01490 . 8 180 Primary Pumps ATPases(2) AT4G32530 76.8 1.5e-74 276.6
Cma12g00314 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.3e-72 267.3
Cma05g00409 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cma01g01490 . 4 180 Primary Pumps ATPases(2) AT2G25610 82.5 3.8e-71 265.4
Cma12g00314 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.5e-71 264.6
Cma05g00409 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cma11g01035 . 1 351 Primary Pumps ATPases(2) AT3G28710 94.3 7.4e-199 690.3
Cma11g01035 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 8.6e-192 666.8
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07810 80.7 0.0e+00 1673.3
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07810 80.4 0.0e+00 1653.3
Cma13g00147 CST 63 1087 Primary Pumps ATPases(2) AT4G00900 66.2 0.0e+00 1333.2
Cma01g00579 CST 22 1045 Primary Pumps ATPases(2) AT4G00900 65.2 0.0e+00 1305.4
Cma12g00603 . 1 1032 Primary Pumps ATPases(2) AT1G10130 79.6 0.0e+00 1590.5
Cma13g00147 CST 42 1106 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1673.7
Cma01g00579 CST 1 1065 Primary Pumps ATPases(2) AT1G07670 80.1 0.0e+00 1652.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004869 2 1 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 3 1 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma13g00147 Cma_Chr13 FPKM 98.505501 103.850227 93.029259 91.681396 58.919239 62.359138 56.950943 72.211273 70.599571 74.316452