Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00190 ATGGCCGCCTCTGCTGCTGCTTTGGATCCTTCCTCCCTGCAATTCACGCCGACTTGGGCCGTGGCTGCGGTTTGCTTCATCTTCATCTCCCTCTCGCTCTTCCTCGAGCATTTGATTCATCTCCTCTCCAATTGGTTGAAGCGGAAGAGGAAAACGGCATTGTTCGAGGCGGTTGAGAAGCTTAAATCAGTTTTGATGCTTCTAGGGTTCATGTCACTAACTCTTACGGTAACGCAACAGCCAGTATCGAAGATTTGCATTCCGAATAGCGTAGCGTTTACGATGCTTCCGTGCCAGAGAGAAATACAGATCAAAGCGATTAAGAATTTGGAGATGGAGCAACTGCGATCGTCTTCCGCTACAAATCGGTGGTTTTCGTGGCTGCCAGGAAAATTTGTGAGCCTCGCGGCGGGAGGCGAAGAAGAGGAGAGTAGTAGTAGCGGTGATTCTTCTTCTTCTTCTTCTTCTTCTTCTGATTACTGTACTGCGAAGGGGAAGGCGTCGCTGATATCGCAAGGAGGAATGAATCAATTGAACAATTTCCTATTCGTGTTGGCAGCTATGCAGATTCTTTACAGCGTTCTCACCATGGCGTTAGGAAAGGCCAAGATGAGACGCTGGAAAGCTTGGGAAGAAGAAACTCTTACGTTGGATTATCAAGTGGCCAATGATCCACATCGCTTTAGATTTACAAGGCAAACAACATTCGGACGTCGACATATCAGTTCTTGTGCAACACCACCATTTCTTCTCTGGATAAAATGCTTCTTGAGACAATTCTTTCGTTCCGTGGCCAAAGTCGACTACTTGACCCTTCGCAATGGTTTCATCTCGACTCACGTACAGGGAAATACTTCCTTCAACTTTCAAAAGTATATTAAAAGATCATTGCACGATGACTTCAAAGTTGTCGTCGGCATCAATCCTTTCATGTGGCTTATAGTAGTCATCTTCATTCTTGTAGATATAGTGCTAGCTCTTGGAACAAAACTTGAAGTAATAGTAGCAAGGCTTGCCCTTGAGCTTCAAGACAAGACCGATGTGATCAAAGGAGCTCCAATGGTGGAACCAAGTGATGATCTTTTCTGGTTCAATCACCCCAAATTTGTTCTCACCCTGCTTCATTTCACTTTGTTCATGAACGCCTTTGAGTTTTCGTTTTTTATCTGGGTTACGCTACAATATGGGATAAAATCTTGCTACCACGAACACTTGGAGGTCATCATCACAAGAGTCGTCTTAGCGGTCACTGTTCAAGTGTTGTGCAGCTACATTACTTTGCCTCTTTATGCTCTAGTCACACAGATGGGCTCACAATTCAAAGCTGCAGCATTAGAAGAACACACAGCCAACGCCATAAAGCAATGGCACAAAGATGTGAAGCAAAAGAGAAAGAAGCATCACCATCACCATCACCATCACCATCATCACTACCTCGACTCGAGTTTGCACCAGGAAGGATCGTCTCATTCTACGGTTACCGAGCGTCAGTCGTCAAGAGTTTTCGAGAGGAGCAGCAGCAGAACCCTAAGCTCTCAAGAGATGGTGAGCTCTTTCCATCATCGAGCTCCAACTTTTTCTGAGTTCAACAATCTTGCAGCCGGAAATGGAGGAAAAGCCGACGGCTCTTCTTCTCCGAAGCCCTTGAAGTTCACGGCATACCAAAACCCGGCCTTATTCGCCGCTCTAACCACCAACAGCCTCCAACCTTCGAAGTTCACCTTCCTCTGCATCTTCTCCCTCTCCTCCGTGTCTGCATTTGCCTTCCTTCATTTGTCTGCCAAGGCTGTACAAACTGCGGTAGGCTTAGTCTTTTTAGGAACAGTCTTAGCTTTTTTCAAAGCGATATCCTTGTATAGAAAAAGATTGAGTGGTTTTGTGTCTGTTATAACTGCCACTAAAGGAACCAAGGATCAAACACCTCTTTCCAAGCGTCAATTGGGGCTTATGGGATTAAAACCAAAGCATGATAATGGGACATCTGAAAAAGCTGTAAAGCCTCCAAAATCTAAGCCCTACTCATCACCTTCTGATGTTCTTGTTCCTCTTCATCAATCAGTTGGCAATTTTAGTTATTCCTCTCAAAGAAACATAGATAAATTGAACTCTACCAGTGGAAGTAAAATGCAGTCTTTCACAACGCCTTTGAAATCTCCGGGTTCTGCGTCTTCCTTGTATCTTGTCTCTGGAGTGGCCTCACCACTGCCTTCTGCGCAGAGTTCATCAGGACGGGAGTCAGTGGTTTGTACCCCGTGGTCAAGCAAGCGAGTATCCTCTCTGAAAGAAATTACATCTGAAGAAGACTTTGAACAATTCCTTGCTGAAGTAGATGAAAAATTAACTGAGTCTGCAGGAAAATTGGCAACTCCACCCCCCACCATCGGTAGTGTTGGTATTGCCAGTCCTAGTACTGTGGCTACTTCAGCTAATACTTCTGGAACTACCAGAAGTACTCCCTTGAGGCCTGTAAGGATGTCACCGAGTTCACAGAAATTCACCACTCCCCCTAAGAAGGTAGAGGGTGATGTTCCCTCTCCAATGTCTATGGAGGAAATGGTTGAAGCTTTCAAGCATTTGGGAGTATATCCTCAAATTGAAGAATGGCGTGATCGTCTCAGGCAATGGTTCTCTTCCACTTTGCTTAATACTCTTGTTGAAAAGATTGAAACCAGTCATGTTCAGGTAAAAGAAGCGGCTGCTAAACTTGGTGTCTCGATTACTATAAGTCCTGTAGGCGACTCAGCGGAATCCCTTCCCACTGTGTCTTCGGTTGACAGGACTAATGAATGGCAACCAACATTGACCCTTGATGAAAATGGACTCCTTCACCAGTTACGAGCAACTCTCGTGCAATCCATTGATGCCTCTACAATCAAGATGCCTCTGGCAAACGCACCACAGTCCCCTCAGCAGAATCTGTTAGTTTCGGTGATGCAGGAGTGTGTTGATGCCATTACAGAGTACCAGAAACTCCTTGCTTTGATGAAGGGTGAATGGGTAAAAGGCTTACTGCCTCAAAGTAGCATTCGAGCAGATTATGCAGTACAAAGAATCAAAGATCTTTCTGAAGGGACCTGCTTGAAGAATTACGAGTATCTTGGGACTGGAGAGGTTTACGATAAGAAGAACAAGAAATGGACACTTGAGCTCCCAACCGATTCTCACTTACTCATGTATTTATTCTGTGCTTTCCTAGAGCATCCAAAGTGGATGCTACATGTGGATCCTTCAACCTATGCTGGGGCTCAGTCCAGCAAAAATCCTTTGTTCTTGGGGGTTCTGCCTCCAAAAGAACGGTTTCCCGAGAAGTACGTAGCAATTATATATGGCGTTCCTTCCGTCATTCACCCCGGAGCTTGCATACTGGCTGTTGGAAAGAAAAGTCCTCCAGTTTTCTCTTTGTATTGGGACAAGAAGCTTCAGCTTTCCCTTCAGGGAAGAACAGCATTGTGGGACTCCATATTGATTCTGTGTCACAGAGTCAAGTTCGGATATGGTGGAATTATTCGGGGAATGCATCTCGGTTCGTCTGCTCTAAGAATCCTTCCAGTCTTGAATCCAGAGCCAGTAGACTGA 3576 45.25 MAASAAALDPSSLQFTPTWAVAAVCFIFISLSLFLEHLIHLLSNWLKRKRKTALFEAVEKLKSVLMLLGFMSLTLTVTQQPVSKICIPNSVAFTMLPCQREIQIKAIKNLEMEQLRSSSATNRWFSWLPGKFVSLAAGGEEEESSSSGDSSSSSSSSSDYCTAKGKASLISQGGMNQLNNFLFVLAAMQILYSVLTMALGKAKMRRWKAWEEETLTLDYQVANDPHRFRFTRQTTFGRRHISSCATPPFLLWIKCFLRQFFRSVAKVDYLTLRNGFISTHVQGNTSFNFQKYIKRSLHDDFKVVVGINPFMWLIVVIFILVDIVLALGTKLEVIVARLALELQDKTDVIKGAPMVEPSDDLFWFNHPKFVLTLLHFTLFMNAFEFSFFIWVTLQYGIKSCYHEHLEVIITRVVLAVTVQVLCSYITLPLYALVTQMGSQFKAAALEEHTANAIKQWHKDVKQKRKKHHHHHHHHHHHYLDSSLHQEGSSHSTVTERQSSRVFERSSSRTLSSQEMVSSFHHRAPTFSEFNNLAAGNGGKADGSSSPKPLKFTAYQNPALFAALTTNSLQPSKFTFLCIFSLSSVSAFAFLHLSAKAVQTAVGLVFLGTVLAFFKAISLYRKRLSGFVSVITATKGTKDQTPLSKRQLGLMGLKPKHDNGTSEKAVKPPKSKPYSSPSDVLVPLHQSVGNFSYSSQRNIDKLNSTSGSKMQSFTTPLKSPGSASSLYLVSGVASPLPSAQSSSGRESVVCTPWSSKRVSSLKEITSEEDFEQFLAEVDEKLTESAGKLATPPPTIGSVGIASPSTVATSANTSGTTRSTPLRPVRMSPSSQKFTTPPKKVEGDVPSPMSMEEMVEAFKHLGVYPQIEEWRDRLRQWFSSTLLNTLVEKIETSHVQVKEAAAKLGVSITISPVGDSAESLPTVSSVDRTNEWQPTLTLDENGLLHQLRATLVQSIDASTIKMPLANAPQSPQQNLLVSVMQECVDAITEYQKLLALMKGEWVKGLLPQSSIRADYAVQRIKDLSEGTCLKNYEYLGTGEVYDKKNKKWTLELPTDSHLLMYLFCAFLEHPKWMLHVDPSTYAGAQSSKNPLFLGVLPPKERFPEKYVAIIYGVPSVIHPGACILAVGKKSPPVFSLYWDKKLQLSLQGRTALWDSILILCHRVKFGYGGIIRGMHLGSSALRILPVLNPEPVD 1191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1471150 1481829 + CmaCh13G001900.1 Cma13g00190 306017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00190 1191 Pfam Mlo family 12 485 IPR004326 GO:0006952|GO:0016021
Cma13g00190 1191 MobiDBLite consensus disorder prediction 457 507 - -
Cma13g00190 1191 MobiDBLite consensus disorder prediction 784 845 - -
Cma13g00190 1191 PANTHER UNCHARACTERIZED 541 1189 IPR019176 -
Cma13g00190 1191 MobiDBLite consensus disorder prediction 796 835 - -
Cma13g00190 1191 MobiDBLite consensus disorder prediction 458 478 - -
Cma13g00190 1191 MobiDBLite consensus disorder prediction 643 677 - -
Cma13g00190 1191 MobiDBLite consensus disorder prediction 484 507 - -
Cma13g00190 1191 Pfam Cytochrome B561, N terminal 550 1185 IPR019176 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00538 Cma-Chr1:2790988 Cma13g00190 Cma-Chr13:1471150 0 dispersed
Cma13g00190 Cma-Chr13:1471150 Cma02g00883 Cma-Chr2:5245432 1.17E-150 dispersed
Cma13g00188 Cma-Chr13:1437806 Cma13g00190 Cma-Chr13:1471150 2.77E-155 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00190 - - bhj:120083853 1163.67