Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00207 ATGTTTCTCATGGTGTTAACCATGATTCAAAGAGTAGTTCAATTTGATCAATCAGCACACATAATAGTGATGATTGCAATCATGGGTTTGCTAATTCTTCCCTTGTTCATAGCCATTAGAGAAGAAATGGTTCATTGGAATCTTAACAAAATGACCAAATTTGAAAAATGCCAAACATCAGCCTCCATAATTTCATATTCCTCTTCCACATTACAACATTCAAGAAATTCATATCTTTCAAACATTTTCAACAAACCCGAAAGAGGAGATGATTACACAATTCTTCAAGGAATTTTCAGCATTGACATGCTCCTCATATGCCTTGCAATGTCAATTGGTACCGGCTCAAGCCTTACAGCCATGGACAACCTCGGCCAAATCGGAGAATCCCAAGGATACTCCACTGAATCCGTCAATGCAATGGTCTCCATCATCAGCATTTTTAACTTCCTTGGAAGAATCTTCTCTGGGTTTGTTTCAGAAATCCTGCTCGAGAAATACAAATTTCCCCGCCCGTTGATGCTGACTCTAACCCTTTTGGTGTCGTGCATTGGTTTCTTGTTGGTGGCCTTCCCCTTTCATAATTCGCTCTACATTGCATCAATCTTAATTGGGTTTGCTTTTGGGTCTCAAGTTCTATTGGATATCACCATGATTTCAGAGTTTTTTGGTCTTGAACATTACGCCATGTTTTATAATGTTGCGCAACTGGCTTGTCCAATTGGGACTTATGTTCTGAAGGTGTTAGTGGCTGGAAAGCTGTACGACGAGGAAGTGAAGACATGGAGTGATTCACCAGAGTATATATGCCATGGGGAACAATGTTACAGAAACTCTTTCACGTTTTTGACTGAGATGTCGCTGTTGGGAGCTGCAATATCATTGATTTTGGTGAAGAGAACGAGGGAGTTTTATAGACAGGATATATACAAGAAGTTTAGGGAAGATATGGATTCTTTGAAGGAGGAAGTGGAACTTTACCCTCACGATGTGCGGCAGCCTGAAGTTGAAAGCGTACATGTTCACAAAGAAGTTACCATTTTCAAGAAGTGA 1053 40.08 MFLMVLTMIQRVVQFDQSAHIIVMIAIMGLLILPLFIAIREEMVHWNLNKMTKFEKCQTSASIISYSSSTLQHSRNSYLSNIFNKPERGDDYTILQGIFSIDMLLICLAMSIGTGSSLTAMDNLGQIGESQGYSTESVNAMVSIISIFNFLGRIFSGFVSEILLEKYKFPRPLMLTLTLLVSCIGFLLVAFPFHNSLYIASILIGFAFGSQVLLDITMISEFFGLEHYAMFYNVAQLACPIGTYVLKVLVAGKLYDEEVKTWSDSPEYICHGEQCYRNSFTFLTEMSLLGAAISLILVKRTREFYRQDIYKKFREDMDSLKEEVELYPHDVRQPEVESVHVHKEVTIFKK 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1638975 1640027 - CmaCh13G002070.1 Cma13g00207 306034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00207 350 SUPERFAMILY MFS general substrate transporter 22 305 IPR036259 -
Cma13g00207 350 Gene3D MFS general substrate transporter like domains 97 307 IPR036259 -
Cma13g00207 350 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 1 322 - -
Cma13g00207 350 Pfam Major Facilitator Superfamily 23 238 IPR011701 GO:0022857|GO:0055085
Cma13g00207 350 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00205 Cma-Chr13:1625521 Cma13g00207 Cma-Chr13:1638975 0 dispersed
Cma13g00207 Cma-Chr13:1638975 Cma01g00525 Cma-Chr1:2719676 1.21E-127 dispersed
Cma13g00206 Cma-Chr13:1630082 Cma13g00207 Cma-Chr13:1638975 8.14E-115 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00207 - - cmax:111469395 636.336