Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00211 ATGTGCAAGATGGAAGAGAGGCCGTATGAGTACTTACGTCCATTAGTTCAGCTAATGACCATGGGCGACAACCGTGAAACAGAAAGTTGGCTATTCGTGAAACAAGTTGTTGAAGGACGATGGTTTTCAGTGTTCACCTCTTTTCCGATCATGATCGGCTGCGGTTCACCTTACTTGTTCGGAACATACTCCAAACTCTTAAAAACAAAATTTGACTACAATCAAACCCAACTTAATACCTTGGGATTCGCTAAAGATCTCGGCTCCAACCTCGGAGTTTTTGCCGGTCTTTTCGCCGAGGTGGCTCCTCCGTGGATGCTTTTCCTTGTGGGGATATCCTCCAATTTCTTCAGCTACTTTATGATTTGGCTCTCCGTTTCTAACTACGTCCCAAAACCCCATTTATGGCTAATGTTTGTTTACATCTATATTACTTCTAATTCACAGAACTTCCCCAACACCGCCGTTGTGGTCACTAGCGTTGGAAATTTTCCTGATCAACGCGGTATCATTTTGGGTCTTCTCAAGGGTTTCGTTGGCCTCGGTGGGGCCATCCTAACTCAAATTAATTTAGCAATTTACGGCAACCAAAATTCTATCGATCTTCTCCTCCTTCTTTCATGGCTACCCTCCATTGTATGTTTCTTGTGTTTTCTTCCAATTCGGACAATCAAAGCTCGGAAGCATCCACAGGAGCTCAAAGTGTTCTACCACTTGCTTTACGTGTCCATAGCGATAGCGGTGTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGCTTTCTCTCAGGCTGGCTATGCTGGTGGCGTCGCGGTCATCGTCGTCTTAATCTGTCTGCCCCTTCTGATAGCTATTAAAGAAGAACTTTCTCTCTTTAAACTCGGTAAACAAACCATGAATCCTTCTGTTCTTGTTTCGATTCCCCGTGAACCACTTGAGCAAATTTCAAAAATTTCTTTGCCGAGCGTCTCGAATGTATGTAAGGGGCCGCAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTCTTCTAAGCAAAGATATGACTCTTATTTTCATAGCAACGATTTCTGCATGTGGATCATCCGTCGCTGCCATTGACAATCTTGGGCAGATTGCCGAGTCACTAAAATATCCAAATCATTCCATGAGCATACTGGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTCTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTCGGTCTTACCCAACTTTTCACCTGCACCGGCTTGCTCTCCATCGCATTCCCTTATGTAAATTCAGTCTATGTAGCTTCGTTGATCATTGGGTTTGGCCTTGGAGCCCAAACTCCATTGATATTCGCCATAATCTCTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTTGGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGAAAGGGCCTAACTTGCACTGGAACTCATTGCTTTGGTGAATCGTTCATGATTTTGGCTACACTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTCTACAAAGGCGATGTTTATAAGAAATACAGAGATGACATAGAGGTTGCACAGTCGAACGTGGAATTATATTCTTCCGATGATAAGAACAATGAACACAAAAAGAAAACTGATGATCCAATTAAATAA 1782 43.1 MCKMEERPYEYLRPLVQLMTMGDNRETESWLFVKQVVEGRWFSVFTSFPIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVPKPHLWLMFVYIYITSNSQNFPNTAVVVTSVGNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSIDLLLLLSWLPSIVCFLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNIAFSQAGYAGGVAVIVVLICLPLLIAIKEELSLFKLGKQTMNPSVLVSIPREPLEQISKISLPSVSNVCKGPQRGEDFSILQALLSKDMTLIFIATISACGSSVAAIDNLGQIAESLKYPNHSMSILVSWISIFNFFGRVFSGFISETLMTKYKLPRPFMFGLTQLFTCTGLLSIAFPYVNSVYVASLIIGFGLGAQTPLIFAIISDLFGLKHYSTLLNCGQLAVPLGSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFGESFMILATLTLFGAMASFVLAYRTRDFYKGDVYKKYRDDIEVAQSNVELYSSDDKNNEHKKKTDDPIK 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1666780 1674416 - CmaCh13G002110.1 Cma13g00211 306038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00211 593 Gene3D MFS general substrate transporter like domains 347 553 IPR036259 -
Cma13g00211 593 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 24 568 - -
Cma13g00211 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 24 568 - -
Cma13g00211 593 SUPERFAMILY MFS general substrate transporter 242 551 IPR036259 -
Cma13g00211 593 Pfam Nodulin-like 40 286 IPR010658 -
Cma13g00211 593 SUPERFAMILY MFS general substrate transporter 18 229 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00211 Cma-Chr13:1666780 Cma13g00215 Cma-Chr13:1708400 0 dispersed
Cma13g00211 Cma-Chr13:1666780 Cma13g00212 Cma-Chr13:1676478 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00211 - - cmos:111464768 1029.62