Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma13g00218 | ATGAATCCTTCCGTTAGTGTTTCGATTCCCAACGAGCAACTTGAGGAAATTTTAGAAATTTCTTTGACTAGTGTCTCAAATGTATGTAAGAAGCCGCAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTCTTCTAAGTAAATATATGATTCTTATTTTTATAGCAACGGTTTCTGCATGTGGGTCCTCCTATGCAGCCATTGACAATCTTAGGCAGATCGCCGAGTCACTGAAATATCCAAATCATTCCATAAGTATACTAGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTGTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTTGGTCTTACCCAACTTTTCACCTGCACCAGCTTGCTCTCCATCGCATTCCCTTATATAAATTCAGTCTATGTAGCTTCGTTGATCATTCGGTTTGGCCTTGGAACCCAAACTCCATTGATATTCGCCATAATCTTTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTCAGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGAAAGGGCCTAACTTGCACCGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTACACTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTTTACAAAGGCAATGTTTATAAGAAATACAGAGATGACATAGAGATTACACAGTCGAACGTGGAATTATATTCTTCCGATGATAAGAACAATGAACACAAAAAGAAAACTGATGATCCAATTAAATAA | 885 | 39.55 | MNPSVSVSIPNEQLEEILEISLTSVSNVCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYKKYRDDIEITQSNVELYSSDDKNNEHKKKTDDPIK | 294 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 1722513 | 1723397 | + | CmaCh13G002180.1 | Cma13g00218 | 306045 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma13g00218 | 294 | SUPERFAMILY | MFS general substrate transporter | 30 | 252 | IPR036259 | - | |
| Cma13g00218 | 294 | PANTHER | PROTEIN NUCLEAR FUSION DEFECTIVE 4 | 21 | 269 | - | - | |
| Cma13g00218 | 294 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 21 | 269 | - | - | |
| Cma13g00218 | 294 | Gene3D | MFS general substrate transporter like domains | 41 | 253 | IPR036259 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma13g00218 | Cma-Chr13:1722513 | Cma13g00215 | Cma-Chr13:1708400 | 0 | dispersed | |
| Cma13g00216 | Cma-Chr13:1712926 | Cma13g00218 | Cma-Chr13:1722513 | 1.83E-132 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma13g00218 | - | - | cmax:111469247 | 585.104 |