Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00224 ATGATCGGTTGCGGTTCACCTTACTTGTTCGGAACATACTCCAAACTCTTAAAAACAAAATTTGACTACAATCAAACCCAACTTAATACCTTGGGATTCGCTAAAGATCTCGGCTCCAACCTCGGAGTTTTTGCTGGGCTTTTCGCCGAGGTGGCTCCTCCGTGGATGCTTTTCCTTGTGGGAATATCCTCCAATTTCTTCAGCTACTTTATGATTTGGCTCTCCGTTTCAGACTATGTCCCAAAACCCCCTTTATGGCTAATGTTTGTTTACATCTATATGACTTCTAATTCACAAAACTTCCCCAACACCGCTGTTATGGTCACCAGCGTCAGAAATTTTCCTGATCAACGAGGTATCATTTTGGGCCTTCTCAAGGGTTTCGTTGGCCTTGGTGGGGCCATCCTAACTCAAATTAATTTAGCAATTTACGGCAACCAAAATTCTATCGATCTTCTTCTCCTTCTTTCATGGCTACCCTCCATTGTTTGTTTCTTGTGTTTTCTTCCAATTCGGACAATCAAAGCTCGGAAGCATCCACAGGAGCTCAAAGTGTTCTACCACTTGCTTTACGTGTCCATAGCGATAGCGGTGTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGCTTTCTCTCAGGCTGACTATGCCGGTGGAATCGCAGTCATCGTCGTCTTAATCTATTTACCCCTTTTGATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGGTAAACAAACCATGAATCCTTCTGTTGTTGTTTCGATTCCCCGTGAGCAACTTGAAGAAATTTCAAAACTTTCTTTGCCGAGTGTCTCAAATGTATGTAAGGAGCCACAAAGAGGAGAAGATTTCAGAATCTTGCAAGCTCTTCTAAGCAAAGATATGGCTCTTATTTTCATAGCAACAGTTTCTGCATGTGGGTCGTCCGTTGCAGCCATCGACAATCTTGGGCAGATCGCCGAGTCACTTAAATATCCAAATCATTCCATAAGTATTCTGGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATTTCTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTCGGTCTTACCCAACTTTTCACCTGCACCGGCTTGCTCTCCATCGCATTCCCTTATATAAATTCAGTCTATGTAGCGTCGTTGATCATTGGGTTTGGCCTTGGAGCCCAAACTCCATTGATATTCGCCATAATCTCTGATCTCTTCGGCCTCAAACATTACTCGACACTTCTCAACTGTGGGCAACTGGCTGTCCCACTTGGGTCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACTTTGTTTGGAACGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTCTACAAAGGCGATGTATATAAGAAATACAGAGATGACATGGAGGCTACGCTGTCAAACGTGGAATTAAATTCTTTCAACGATAAGAACAAGGAACAAAAAAAAGAAAACGGCTTATCAAAGTAA 1629 42.17 MIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSDYVPKPPLWLMFVYIYMTSNSQNFPNTAVMVTSVRNFPDQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSIDLLLLLSWLPSIVCFLCFLPIRTIKARKHPQELKVFYHLLYVSIAIAVFLLFLTITQRNIAFSQADYAGGIAVIVVLIYLPLLIAIKEELFLFKLGKQTMNPSVVVSIPREQLEEISKLSLPSVSNVCKEPQRGEDFRILQALLSKDMALIFIATVSACGSSVAAIDNLGQIAESLKYPNHSISILVSWISIFNFFGRVFSGFISETLMTKYKLPRPFMFGLTQLFTCTGLLSIAFPYINSVYVASLIIGFGLGAQTPLIFAIISDLFGLKHYSTLLNCGQLAVPLGSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGTMASFVLAYRTRDFYKGDVYKKYRDDMEATLSNVELNSFNDKNKEQKKENGLSK 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1755172 1756800 + CmaCh13G002240.1 Cma13g00224 306051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00224 542 Pfam Major Facilitator Superfamily 301 496 IPR011701 GO:0022857|GO:0055085
Cma13g00224 542 Pfam Nodulin-like 4 236 IPR010658 -
Cma13g00224 542 SUPERFAMILY MFS general substrate transporter 7 504 IPR036259 -
Cma13g00224 542 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 1 517 - -
Cma13g00224 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 517 - -
Cma13g00224 542 Gene3D MFS general substrate transporter like domains 297 503 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00221 Cma-Chr13:1738648 Cma13g00224 Cma-Chr13:1755172 7.45E-15 dispersed
Cma13g00223 Cma-Chr13:1746359 Cma13g00224 Cma-Chr13:1755172 0 tandem
Cma13g00224 Cma-Chr13:1755172 Cma13g00225 Cma-Chr13:1763648 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00224 - - cmos:111464768 961.059