Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00225 ATGGAAGGGCGTCCATTAGCCCAATTGGTGACCATGGGCGACAACCGTAAGGTAGAAAGTTGGCTATTTGTGAAACAAGTTGTTGAAGGAAGATGGTTTTCGGTCTTCACCTCTTTTCTGATCATGATCGGTTGCGGTTCACCTTACTTGTTCGGAACATACTCCAAACTCTTAAAAACAAAATTTGACTACAATCAAACCCAACTTAATACCTTGGGATTCGCTAAAGATCTCGGCTCCAACCTCGGAGTTTTTGCCGGTCTTTTCGCCGAGGTGGCTCCTCCGTGGATGCTTTTCCTTGTGGGGATATCCTCCAATTTCTTCAGCTATTTTATGATTTGGCTCTCCGTTTCTAACTACGTCCCAAAACCCCATTTATGGCTAATGTTTGTTTACATTTATATTACTTCTAATTCACAGAACTTCCCCAACACCGCTGTTATGGTCACCAACGTCAGCAATTTTCCTAATCAACGCGGTATCATTTTGGGCCTTCTCAAGGGTTTCGTTGGCCTTGGTGGAGCCATTCTAACTCAAATTAATTTAGCAATTTACGGCAACCAAAATTCTATCGATCTTCTCCTCCTTCTTTCATGGCTACCCACCATTGTTTGTTTCTTGTGTTTTCTTCCAATTCGGACAATCAAAGCTCGGAAGCATCCACGGGAGCTCAAAGTGTTCTACCACTTGCTTTACGTGTCCATAGCGATAGCGGTGTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGCTTTTTCTCAGGCTGGCTATGCCGGTGGCATTGTGGTCATCGTCGTCTTAATCTGTCTACCCCTTCTAATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGGTAAACAAACCATGAATCCTTCTGTTGTTGTTTCACTTCCCCGTGAGCAACTTGAAGAAATTTCAAAACTTTCTTTGCCAAGTGTCTCAAATGTATGTAAAGAGCCGCAAAGAGGAGAAGATTTCAACATCTTGCAAGCTCTTCTAAGCAAAGATATGGCTCTTATTTTCATAGCAACGGTTTCTGCATGTGGGTCGTCCGTTGCAGCCATTGATAATCTTGGGCAGATTGCCGAGTCACTTAAATATCCAAATCATTCCATAAGTATTTTGGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTCTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTCGGTCTTACCCAACTTTTCACCTGCACTGGCTTGCTCTCCATCGCATTCCCTTATATAAATTCAGTCTATGTAGCGTCGTTGATCATTGGGTTTGGCCTTGGAGCCCAAACTCCATTGATATTCGCCATAATCTCTGATCTCTTCGGCCTCAAACATTACTCGACACTTCTCAACTGTGGGCAACTGGCTGTCCCACTTGGGTCTTATATAATGAATGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTGCAGTGACTTTGTTTGGAACGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTCTACAAAGGCGATGTATATAAGAAATACAGAGATGACATGGAGGCTACACAGTCGAACGTAGAATTAAATTCTTTCGATGATAAAAACAGTGAACACAAAAAGAAAATTGATGATGAAAGTAAATAA 1755 41.88 MEGRPLAQLVTMGDNRKVESWLFVKQVVEGRWFSVFTSFLIMIGCGSPYLFGTYSKLLKTKFDYNQTQLNTLGFAKDLGSNLGVFAGLFAEVAPPWMLFLVGISSNFFSYFMIWLSVSNYVPKPHLWLMFVYIYITSNSQNFPNTAVMVTNVSNFPNQRGIILGLLKGFVGLGGAILTQINLAIYGNQNSIDLLLLLSWLPTIVCFLCFLPIRTIKARKHPRELKVFYHLLYVSIAIAVFLLFLTITQRNIAFSQAGYAGGIVVIVVLICLPLLIAIKEELFLFKLGKQTMNPSVVVSLPREQLEEISKLSLPSVSNVCKEPQRGEDFNILQALLSKDMALIFIATVSACGSSVAAIDNLGQIAESLKYPNHSISILVSWISIFNFFGRVFSGFISETLMTKYKLPRPFMFGLTQLFTCTGLLSIAFPYINSVYVASLIIGFGLGAQTPLIFAIISDLFGLKHYSTLLNCGQLAVPLGSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILAAVTLFGTMASFVLAYRTRDFYKGDVYKKYRDDMEATQSNVELNSFDDKNSEHKKKIDDESK 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1763648 1765724 + CmaCh13G002250.1 Cma13g00225 306052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00225 584 SUPERFAMILY MFS general substrate transporter 34 545 IPR036259 -
Cma13g00225 584 MobiDBLite consensus disorder prediction 563 584 - -
Cma13g00225 584 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 560 - -
Cma13g00225 584 MobiDBLite consensus disorder prediction 568 584 - -
Cma13g00225 584 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 16 560 - -
Cma13g00225 584 Pfam Nodulin-like 31 277 IPR010658 -
Cma13g00225 584 Pfam Major Facilitator Superfamily 342 537 IPR011701 GO:0022857|GO:0055085
Cma13g00225 584 Gene3D MFS general substrate transporter like domains 339 578 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00215 Cma-Chr13:1708400 Cma13g00225 Cma-Chr13:1763648 0 dispersed
Cma13g00223 Cma-Chr13:1746359 Cma13g00225 Cma-Chr13:1763648 0 dispersed
Cma13g00224 Cma-Chr13:1755172 Cma13g00225 Cma-Chr13:1763648 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00225 - - cmos:111464768 1021.54