Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00268 ATGGCGCTCTATCCATCCCTACAGCTCATTCGATTCCCTCCTCAAGCACTCCCCTCGTCCTCTCGCCACCTTCTCATTTCTGACCTCGGCTCCGTATCGCGCTTCTTCCGATCTCCATGGCTTTCCTCTTTGCCTCCGTCGCAGAAGTGCAGGATGATTTTATCTTCCAGAACCAAGTGTTTCTCCATGTCCACTGAGGAGGATCAGTGGAGTGAATCGGAAGCGTTGATGTCCGATGTTGACGAAAGGGGAGATCGTGAGGATGATATTGGTGTTCAGCAAGAGAGCTCTGTGGTCTCTGCTGCTTCTGGGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGTGAGTCGGTTTATGAGGTATTAGAGGTTAAAGCCAATGGTGCCGTATCTACTAGGAAGATAAACAGACGCCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGGAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAAAATGCTATTTTACTTAATCTGGGATCGCTGCGAGCAATAGCTATGCCGGACTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAGGCTTTTATTGAATCATTGTTGCCACGATTGAACCCAAAAAGCATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACACAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGCATCAGCAAGCAGACTTTGGTAGAATTAGGTTCCAGGGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGACCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGATTAATAAAGGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGGAGATTGCTGATGACGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCGGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCTATTGCCGTCAATTTGAGCTCGCGGCGACTAGAGGTTAGCAGAGTAGAATTGCTTCTCCAAGTTGGGACATTTTGTGTGGCTGTTGGCGCTCTGGTTGCAGGAATATTTGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGAGAATCCTGTAGCTAAATACTTCTTCAGGTTATTCAACATTCAATATTGGAGGGGCTGTTATATCCCACTGATGGGGAAGCAAATTGTTAAGGGTATGGCTATATATCCATTATGTGTATCATATGAATATTCATTTTTCTCATATAATATGATATGGTGGAAGCTGCATTTATTAGGCTATAGCCCAATATTGGTACCATCCCCATACTGCTTCAGTTTGGTTTATGAAACAAAAGGAAGTATGCTCGGTTAG 1557 44.7 MALYPSLQLIRFPPQALPSSSRHLLISDLGSVSRFFRSPWLSSLPPSQKCRMILSSRTKCFSMSTEEDQWSESEALMSDVDERGDREDDIGVQQESSVVSAASGQRISSSSPSDYLSLAIRESVYEVLEVKANGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVRENAILLNLGSLRAIAMPDCVLIFDYNRPGGQAFIESLLPRLNPKSMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTINKGNDDVECSLPLDKEIADDEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIENPVAKYFFRLFNIQYWRGCYIPLMGKQIVKGMAIYPLCVSYEYSFFSYNMIWWKLHLLGYSPILVPSPYCFSLVYETKGSMLG 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2193822 2213855 - CmaCh13G002680.1 Cma13g00268 306095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00268 518 MobiDBLite consensus disorder prediction 76 92 - -
Cma13g00268 518 Gene3D - 117 201 - -
Cma13g00268 518 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 42 443 IPR039204 -
Cma13g00268 518 Gene3D Magnesium transport protein CorA, transmembrane region 204 385 - -
Cma13g00268 518 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 42 443 - -
Cma13g00268 518 Coils Coil 334 354 - -
Cma13g00268 518 MobiDBLite consensus disorder prediction 70 95 - -
Cma13g00268 518 CDD Mrs2_Mfm1p-like 127 434 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00268 Cma-Chr13:2193822 Cma17g00187 Cma-Chr17:979088 3.33E-19 dispersed
Cma12g00807 Cma-Chr12:5843592 Cma13g00268 Cma-Chr13:2193822 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00268 K16075 - csv:101219314 681.404