Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma13g00289 | ATGGATTCAACCATCATCTTCTTATTCCCCGGTGCCTCCGACCACCTACTCCACTCTCTCCCCACCCTAGTCTCCATCTTGTTCTTCTCCTTCACGGCGGCCTTCACGGTGTTCTCCTTCTCCTTGTTCATTCTCCGACTTCGACCCTGCTGCAACTGCCCCATCTGCCACTCCTACCTCTCCTCCACATGGCTCGCCTCCTTCCCCAACTTATCCGATTGGTACGCCCACCTCCTCTCCCACTCCCCCACCGCCACCATCACCATCCACGTCCTCTCCAACATCCTCACCGCCAACCCCGACAACGTCCACCACATCCTCAAAACCAACTTCCACAACTACCCAAAAGGCAAACCCTTCTCCTCCATCCTCGGCGACCTCCTCGGCCACGGCATCTTCAACGTTGACGGCCACTCCTGGACCTTCCAACGCAAAATGGCTAGCTTAGAGCTCGGTAGCCTCTCCGTCCGCTCCCACGCCTTCCACATCCTAACCTCCCAGATTCAGACAAGGCTGCTTCCGATCCTGTGTTCGAATCACGGCATGCTGGATTTACAGGATATTTTTAAACGATTTTCTTTTGATAATATTTGTCGATTCTCCTTTGGGTTGGACCCTGGCTGTTTGAGCTTGTCTTTGCCTATTTCGGAGTTTGCTGTTGCCTTTGACTTGGCGTCTAGATTGTCGGCGGAGAGGGCTATTACGCCTTACCCTGTTATGTGGAGGATTAAGCGGCTGTTTGGATTGGGGTCGGAGAGGAAGCTTAGTGATGCTATTAAAATGGTGGATGATCTTGCCATGGAAGTCATACGCCATCGCCGGGAGATTGGATTCTCTCATCGGAATGATCTTCTCTCTAGATTCATGGCTTCCATTGATGACGACAGATATCTTAGAGACATTGTTGTCAGCTTCCTCCTCGCCGGCCGGGACACGGTGGCGTCGGCTTTGACTAGCTTCTTCTGGCTACTATCTCAAAACCCAGAAGTGGAGGACGAGATTCTCGCCGAGTCGGATCGGGTCATGGGACCCGACCCGGACGCGTTACCCAGTTTCGACAACCTTAAAGACATGCAATATCTTCACGCAGCGGTCTACGAGAATCTGCGCCTCTTTCCACCGGTTCAGTTCGACTCCAAGTTCGCCGAGGAAGACGATATCTTGCCGGACGGCACGTTTGTTCAGAAGGGTACAAGGGTAACTTACCACCCCTACGCCATGGGTCGGATGGACCGGATTTGGGGATCCGATTGTCTCCAGTTTAAACCGGAGAGGTGGCTCAAGAATGGAAGCTTTGCACCTGTAAACCCGTTTAAATTCCCTGTTTTTCAGGCCGGTTTACGGGTTTGTTTGGGGAAGGAGTTAGCGGTGATGGACGTGAAATGTACGGCGGTGGTTTTGATTCGGAAGTTTAAGATCCGGTTGGTTGGAACTGACCGGGTTGCCCGGTTTGCTCCCGGTCTGACGGCTAGCTGGAGAGGTGGGTTGCCGGTTCGAATTGAACAAAGAACCACCAGTTGA | 1521 | 52.86 | MDSTIIFLFPGASDHLLHSLPTLVSILFFSFTAAFTVFSFSLFILRLRPCCNCPICHSYLSSTWLASFPNLSDWYAHLLSHSPTATITIHVLSNILTANPDNVHHILKTNFHNYPKGKPFSSILGDLLGHGIFNVDGHSWTFQRKMASLELGSLSVRSHAFHILTSQIQTRLLPILCSNHGMLDLQDIFKRFSFDNICRFSFGLDPGCLSLSLPISEFAVAFDLASRLSAERAITPYPVMWRIKRLFGLGSERKLSDAIKMVDDLAMEVIRHRREIGFSHRNDLLSRFMASIDDDRYLRDIVVSFLLAGRDTVASALTSFFWLLSQNPEVEDEILAESDRVMGPDPDALPSFDNLKDMQYLHAAVYENLRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGSDCLQFKPERWLKNGSFAPVNPFKFPVFQAGLRVCLGKELAVMDVKCTAVVLIRKFKIRLVGTDRVARFAPGLTASWRGGLPVRIEQRTTS | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 2580900 | 2583259 | - | CmaCh13G002890.1 | Cma13g00289 | 306116 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma13g00289 | 506 | SUPERFAMILY | Cytochrome P450 | 59 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PANTHER | CYTOCHROME P450 | 26 | 501 | - | - | |
Cma13g00289 | 506 | Gene3D | Cytochrome P450 | 61 | 506 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PANTHER | CYTOCHROME P450 94C1 | 26 | 501 | - | - | |
Cma13g00289 | 506 | Pfam | Cytochrome P450 | 94 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma13g00289 | 506 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g00463 | Cma-Chr6:2183374 | Cma13g00289 | Cma-Chr13:2580900 | 0 | dispersed | |
Cma10g00068 | Cma-Chr10:262587 | Cma13g00289 | Cma-Chr13:2580900 | 3.68E-141 | dispersed | |
Cma13g00289 | Cma-Chr13:2580900 | Cma14g00499 | Cma-Chr14:2440225 | 9.85E-123 | dispersed | |
Cma13g00289 | Cma-Chr13:2580900 | Cma11g00038 | Cma-Chr11:173319 | 4.08E-142 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma13g00289 | K20624 | - | csv:101207724 | 827.009 |