Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00334 GAGATGAACTTTACTAATTTCATCCTTATTTTATTCTGGTTTTTTCGGTTAATATCACCTGTCATTGCTGTAAAGAAGTCCTATATTGTGTTATTAGGATCTCACTCACATGGGTTAGAGGTATCAACAATAGATCTTCAAAGAGTGGTTGATTCCCATCACAAATTGCTCGGATCCTTCTTGGGGAGTTCTGAAAAGGCAAAAGATGCCATTTTTTACTCGTATAAGAACCATATAAATGGGTTTGCAGCCATTCTAGATGAGGAAGAGGCCACCAAGTTTGCAAAGCACCCAGAAGTAGCAGCAGTGTTGCCAAACAAAGCCAAAGAGTTGCACACAACTCATTCATGGGAGTTCATGCATTTGGAGAAGAATGGTTTTATTCTCCCTTTTTCTCCTTGGAGGAAGGCTAGATTTGGAAAAGATGTTATTATTGCCAATCTCGACACCGGTGTATGGCCCGAGTCCAAGAGTTTTGGAGAACAGGGCATAGTAGGAGGTGTGCCATCGAGATGGAAAGGAGGTTGCACGGATAAAACTCCTGATGCAGTGCCTTGTAACAGGAAATTAATCGGAGCAAAGTATTTCAATCAGGGGGTAATCGCGTACTTGAAATCCCAAAATTTAACAGATGAACTCCCATTGATCGTCAACTCCACGCGCGATTACGTAGGTCATGGATCCCACACGCTATCGACAGCCGGCGGAAACTATGTCTCTGGCGTCAGCGTATTTGGGTCCGGTATCGGAACTGCCAAGGGCGGCTCTCCCAAGGCCCGCGTCGCTGCCTATAAGGTATGCTGGCCGTTCCACAACAGTGGCGGTTGCTACGACGCCGACATTTTTGACGGAATTGATCAAGCCATCTACGACGGCGTCGATGTCCTTTCGCTTTCCATCGGCAGTCCACCAGCCGAATACTATGATGATACCATCGCCATTGCTTCCTTTCATGCACTGAAGAAAGGAATCCCCGTGGTGTGCTCTGCCGGCAACTCTGGCCCGAGCATGGCGACTGCTACTAATATTGCTCCGTGGATTTTGACGGTTGGGGCTAGCACTTTGGACCGTGAATTTCAAGCCCCCATTGAGCTTGGAAACGGGCAACGCTTTTGGGTTTGTTTAAGAATATTTAGTCATGAATTATAA 1149 46.3 EMNFTNFILILFWFFRLISPVIAVKKSYIVLLGSHSHGLEVSTIDLQRVVDSHHKLLGSFLGSSEKAKDAIFYSYKNHINGFAAILDEEEATKFAKHPEVAAVLPNKAKELHTTHSWEFMHLEKNGFILPFSPWRKARFGKDVIIANLDTGVWPESKSFGEQGIVGGVPSRWKGGCTDKTPDAVPCNRKLIGAKYFNQGVIAYLKSQNLTDELPLIVNSTRDYVGHGSHTLSTAGGNYVSGVSVFGSGIGTAKGGSPKARVAAYKVCWPFHNSGGCYDADIFDGIDQAIYDGVDVLSLSIGSPPAEYYDDTIAIASFHALKKGIPVVCSAGNSGPSMATATNIAPWILTVGASTLDREFQAPIELGNGQRFWVCLRIFSHEL 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3872461 3874211 + CmaCh13G003340.1 Cma13g00334 306161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00334 382 Gene3D Peptidase S8/S53 domain 142 355 IPR036852 GO:0004252|GO:0006508
Cma13g00334 382 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 112 IPR037045 -
Cma13g00334 382 Gene3D - 356 371 - -
Cma13g00334 382 Pfam Subtilase family 140 354 IPR000209 GO:0006508|GO:0008236
Cma13g00334 382 PANTHER BNAC02G33520D PROTEIN 17 375 - -
Cma13g00334 382 ProSiteProfiles Serine proteases, subtilase domain profile. 116 382 - -
Cma13g00334 382 SUPERFAMILY Subtilisin-like 111 369 IPR036852 GO:0004252|GO:0006508
Cma13g00334 382 Pfam Peptidase inhibitor I9 27 111 IPR010259 -
Cma13g00334 382 PANTHER PEPTIDASE S8 17 375 - -
Cma13g00334 382 CDD Peptidases_S8_3 109 355 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00332 Cma-Chr13:3854474 Cma13g00334 Cma-Chr13:3872461 3.30E-11 dispersed
Cma13g00334 Cma-Chr13:3872461 Cma13g00339 Cma-Chr13:3920324 0 dispersed
Cma13g00333 Cma-Chr13:3857810 Cma13g00334 Cma-Chr13:3872461 0 tandem
Cma13g00334 Cma-Chr13:3872461 Cma13g00335 Cma-Chr13:3874425 3.43E-122 tandem
Cma13g00334 Cma-Chr13:3872461 Cma16g00984 Cma-Chr16:7576425 7.09E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00334 - - cmax:111471617 741.495