Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00499 ATGCGAGTTGCGTTTCAGAAAAATTTCAACAAACTCGAAAGTTCGAGTTCATTCGGTTGTTTTTTGGTCGGGATCTTGCTTCCTATATACGCTCGCTCTCAATCGGATTCGGGATTCATTTTTGGTTTTTCTCTTGGATCTGGTATCTCAGGAAATAGCCGGAACCCAAGCTGGAATTTGATATTGAGCTGTTCTGAAATGGACAATGGTGATATTGAGAGCGGGGAAGAGGAATTTCATGGGCAGAGGGGAAGGAAGTACCGACCTGTGGAAGCTCATGATCGTGCTGTTCTTGAAATGTCTTCCATGGATCCGGGGGCATCATCTTCTTCGTCCTCCGTTCCCCCCATTTCTCTGAAGAATGTAAAAGTGGATTCTCAGACGGGCACTGAAACAGATGGGAATTCTCCTACTCGTATTGAAGTTGATGGCCCCCAGCGAGAATCCAAGCTGGAGTTTTTTGGTTTTGATTCTCTTGTCAATATTCTTGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCACCTACTAGTCCTCGAGATGGTGAGAACATTTCTATCACTCAAGGATTGCCAAAGACCACTGAAGTCAAATCGGGTACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTTTATTCGATTTACTTGGATTGTTGGCATGGCTGGTATTGGTGAGTCATTAGTGCTGGTATCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATCTCACTAAGTGCTATTGCAACTAATGGTGCAATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGACCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGAATGCTGTACCAGCTGCAGGGCTATTCAGAGAGACTGTAACAAAAGTAAATGGAACAACTGTTGCAGCACCAATACAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACGATTCTTTTGTGCTTCATTGTATTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTGGTTAGCATATTTCTTGGAATTTTTGTGGCAAGAAAAAACGACCCTTCAGATGGCATCACAGGATTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCAGATTATCAGATGACTAACAGTGCTGGAATTCCTGATCCTTTAGGAAAAGTTTATTGGAATTTCAATGCATTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCAGCTTCACTGAAGGATACTCAGCGTTCAATTCCTATTGGAACACTGGCTGCAACTCTGACAACAACTGCATTATATCTGGTCTCTGTGTTGTTGTTTGGAGCACTGGCAACTAGAGAGAAATTGTTGACGGATAGGCTTCTTACTGCTACGGTTGCTTGGCCTTTCCCAGCACTTATTTATGTTGGAATTATTTTATCAACCCTTGGAGCTGCCCTTCAGAGTCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATTCTAAACTATTTTAAAGTAGCAGATGGCAGTGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTGATAATTGGGAATCTTGATCTTATCACACCTACCGTAACCATGTTTTTCCTACTTTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGACGCTCCCAGTTGGCGTCCACGCTGGAGATTCCATCATTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCTCTTGCAAGCCTTCTATATTATTATGTATGCCTTAGAGGTAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTTCGCAGTCTTCGTTCGCTTGGAGCTAGCCAAGTCCACCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCATGGGGAAAGCTGCCAGAAAATGTACCCTGTCACCCTAAACTTGCAGATTTTGCAAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTCTCCATTCTAGATGGAGATTACCATGAACGGGTTGAAGATGCAAAAGCTGCCTGCAAGCAGCTTGCTACATATATTGATTACAAACGCTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCACAATGTCTGAAGGTTTCAGGGGGATCGTTCAGACGATGGGTCTCGGAAATCTCAAGCCAAATATTGTAGTGATGCGATATCCAGAAATATGGCGTCGTGAAAATCTAATAGAAATTCCGACTACTTTTGTTGGAATAATTAATGACTGCATTGATGCTAACAAAGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAGAGGCAGTATGGAACTATCGACTTGTACTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGACCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATTGCAGAGGAGGATTCCGACGCGGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTGTATGATCTTCGGATGCAAGCTGAGGTGATCGTTATAACGATAAAATCATGGGACACACAAGTGGAGGGCGCGCAACCAGACGAATCAATGGAAGCCTTCACTGCTGCTCAAGGGAGGATTGCTAGTTATTTAGGTGAAATGAAGGCAGCAGCTAAGAGCAGAGGTACCACACTCATGGCTGATGGGAAGCCTGTCAGTGTGAATGAGCAGCAGGTTGGGAAGTTTCTAAATACAACTCTCAAGTTGAACTCAACAATTCTGAGATACTCGAGGATGGCTGCTGTCGTGCTCGTTAGCCTCCCGCCACCTCCTGTCGACCATCCCGCATACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAACGTGCCTCGGCTCTTGATCGTTAGAGGATACCGCAGAGACGTTGTAACTTTGTTCACTTAG 3138 43.75 MRVAFQKNFNKLESSSSFGCFLVGILLPIYARSQSDSGFIFGFSLGSGISGNSRNPSWNLILSCSEMDNGDIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGASSSSSSVPPISLKNVKVDSQTGTETDGNSPTRIEVDGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPTSPRDGENISITQGLPKTTEVKSGTLMGVFIPCLQNILGIIYFIRFTWIVGMAGIGESLVLVSFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGLFRETVTKVNGTTVAAPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVVSIFLGIFVARKNDPSDGITGLSLESFKENWSSDYQMTNSAGIPDPLGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTALYLVSVLLFGALATREKLLTDRLLTATVAWPFPALIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLLYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDAKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPTTFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKETFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGAQPDESMEAFTAAQGRIASYLGEMKAAAKSRGTTLMADGKPVSVNEQQVGKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVDHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT 1045
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5319522 5342584 - CmaCh13G004990.1 Cma13g00499 306326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00499 1045 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 78 1044 - -
Cma13g00499 1045 MobiDBLite consensus disorder prediction 101 142 - -
Cma13g00499 1045 MobiDBLite consensus disorder prediction 103 139 - -
Cma13g00499 1045 Pfam Solute carrier family 12 714 835 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cma13g00499 1045 Pfam Solute carrier family 12 845 1044 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cma13g00499 1045 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 78 1044 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cma13g00499 1045 Gene3D Amino acid/polyamine transporter I 197 662 - -
Cma13g00499 1045 Pfam Amino acid permease 204 680 IPR004841 GO:0016020|GO:0055085
Cma13g00499 1045 TIGRFAM 2a30: K-Cl cotransporter 136 1045 IPR004842 GO:0006811|GO:0015377|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma13g00499 Cma18g00502 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00499 Cma-Chr13:5319522 Cma18g00502 Cma-Chr18:2970466 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00499 K14427 - csv:101216218 1794.25