Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma13g00738 | ATGGATGCAGACTCTCCATCTGTCATGAAATTTAAGAATAAAGTCGAAGGCTCTGTTTCAGCTTCTCCATTATTTAAGAAGCAGACAAGTGAGCTAAGCGCAAGTTCAGTGGACAGTGTGAAAAGAACCAGGGCAGTAATGGGTTCCAGAGCACTGGTTTTCTTCCTCTTCTTTTCGTTTCTGGGTGCTTCTTTCAGGTATGCTTCTGCAGCGCATGATGAGCAAGACAATGGTCTGGTTATGAACTTTTACAAGGATTCATGTCCCCAAGCTGAGGATATCATCAAGGAACAAGTCCGGCTTCTCTACAAGCGCCACAAGAACACCGCCTTCTCTTGGCTCAGAAACATCTTCCACGACTGCGCTGTTCAATCCTGTGATGCATCTCTGCTGCTGGATTCCACCAGAAGGAGCCTGTCCGAGAAGGAGACAGACAGGAGCTTTGGACTTAGGAACTTTAGGTATATTGAGACCATTAAAGAGGCTTTGGAGAGGGAGTGCCCTGGAGTTGTGTCCTGTGCGGACATCCTTGTCTTGTCCGCTAGAGATGGCATTGTTTCTCTTGGAGGGCCTTATATCCCACTTAAGACAGGCAGGAGAGATGGAAGGAGAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGATCATAATGAAAGCATGTCTGTTGTTCTTGAAAGATTTGCAGCCATGGGCATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGCGTTGGGAGAACACACTGTGTGAAGCTGGTGCACCGGCTGTACCCGCAGGTAGACCCTGCGCTGAACCCAGGGCATGTGGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGACCCCAAGGCTGTGCAATACGTGAGGAACGACCGTGGCACACCCATGATTCTGGACAACAACTACTACAGAAATATTCTGGACAACAAAGGGTTGCTGATAGTGGACCACCAGCTAGCCACAGACAAGAGAACGAAGCCATATGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATCCTTTCTGAGAACAATCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA | 1137 | 47.76 | MDADSPSVMKFKNKVEGSVSASPLFKKQTSELSASSVDSVKRTRAVMGSRALVFFLFFSFLGASFRYASAAHDEQDNGLVMNFYKDSCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADILEEYLPDHNESMSVVLERFAAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPALNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 6528604 | 6530624 | - | CmaCh13G007380.1 | Cma13g00738 | 306565 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma13g00738 | 378 | PANTHER | PEROXIDASE 42 | 67 | 374 | - | - | |
Cma13g00738 | 378 | Pfam | Peroxidase | 96 | 338 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 189 | 204 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 112 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 170 | 180 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 88 | 107 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 293 | 308 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 349 | 362 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 309 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 151 | 164 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Plant peroxidase signature | 236 | 248 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Haem peroxidase superfamily signature | 189 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Haem peroxidase superfamily signature | 295 | 310 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Haem peroxidase superfamily signature | 171 | 188 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Haem peroxidase superfamily signature | 237 | 252 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PRINTS | Haem peroxidase superfamily signature | 110 | 124 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | PANTHER | PEROXIDASE 25-RELATED | 67 | 374 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | SUPERFAMILY | Heme-dependent peroxidases | 79 | 375 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | ProSiteProfiles | Plant heme peroxidase family profile. | 78 | 375 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma13g00738 | 378 | Gene3D | - | 82 | 375 | - | - | |
Cma13g00738 | 378 | Gene3D | Peroxidase, domain 2 | 215 | 354 | - | - | |
Cma13g00738 | 378 | CDD | secretory_peroxidase | 78 | 373 | IPR033905 | GO:0004601|GO:0042744 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g01247 | Cma13g00738 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g01247 | Cma-Chr3:8234595 | Cma13g00738 | Cma-Chr13:6528604 | 1.91E-127 | dispersed | |
Cma13g00738 | Cma-Chr13:6528604 | Cma14g00201 | Cma-Chr14:864110 | 1.30E-103 | dispersed | |
Cma13g00738 | Cma-Chr13:6528604 | Cma06g00369 | Cma-Chr6:1709568 | 1.99E-135 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma13g00738 | K00430 | - | csv:101214168 | 626.32 |