Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00738 ATGGATGCAGACTCTCCATCTGTCATGAAATTTAAGAATAAAGTCGAAGGCTCTGTTTCAGCTTCTCCATTATTTAAGAAGCAGACAAGTGAGCTAAGCGCAAGTTCAGTGGACAGTGTGAAAAGAACCAGGGCAGTAATGGGTTCCAGAGCACTGGTTTTCTTCCTCTTCTTTTCGTTTCTGGGTGCTTCTTTCAGGTATGCTTCTGCAGCGCATGATGAGCAAGACAATGGTCTGGTTATGAACTTTTACAAGGATTCATGTCCCCAAGCTGAGGATATCATCAAGGAACAAGTCCGGCTTCTCTACAAGCGCCACAAGAACACCGCCTTCTCTTGGCTCAGAAACATCTTCCACGACTGCGCTGTTCAATCCTGTGATGCATCTCTGCTGCTGGATTCCACCAGAAGGAGCCTGTCCGAGAAGGAGACAGACAGGAGCTTTGGACTTAGGAACTTTAGGTATATTGAGACCATTAAAGAGGCTTTGGAGAGGGAGTGCCCTGGAGTTGTGTCCTGTGCGGACATCCTTGTCTTGTCCGCTAGAGATGGCATTGTTTCTCTTGGAGGGCCTTATATCCCACTTAAGACAGGCAGGAGAGATGGAAGGAGAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGATCATAATGAAAGCATGTCTGTTGTTCTTGAAAGATTTGCAGCCATGGGCATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGCGTTGGGAGAACACACTGTGTGAAGCTGGTGCACCGGCTGTACCCGCAGGTAGACCCTGCGCTGAACCCAGGGCATGTGGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGACCCCAAGGCTGTGCAATACGTGAGGAACGACCGTGGCACACCCATGATTCTGGACAACAACTACTACAGAAATATTCTGGACAACAAAGGGTTGCTGATAGTGGACCACCAGCTAGCCACAGACAAGAGAACGAAGCCATATGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATCCTTTCTGAGAACAATCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA 1137 47.76 MDADSPSVMKFKNKVEGSVSASPLFKKQTSELSASSVDSVKRTRAVMGSRALVFFLFFSFLGASFRYASAAHDEQDNGLVMNFYKDSCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADILEEYLPDHNESMSVVLERFAAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPALNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6528604 6530624 - CmaCh13G007380.1 Cma13g00738 306565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00738 378 PANTHER PEROXIDASE 42 67 374 - -
Cma13g00738 378 Pfam Peroxidase 96 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 189 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 112 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 170 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 88 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 293 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 349 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 309 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 151 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Plant peroxidase signature 236 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Haem peroxidase superfamily signature 295 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Haem peroxidase superfamily signature 171 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PRINTS Haem peroxidase superfamily signature 110 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 PANTHER PEROXIDASE 25-RELATED 67 374 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 SUPERFAMILY Heme-dependent peroxidases 79 375 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 ProSiteProfiles Plant heme peroxidase family profile. 78 375 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma13g00738 378 Gene3D - 82 375 - -
Cma13g00738 378 Gene3D Peroxidase, domain 2 215 354 - -
Cma13g00738 378 CDD secretory_peroxidase 78 373 IPR033905 GO:0004601|GO:0042744
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01247 Cma13g00738 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01247 Cma-Chr3:8234595 Cma13g00738 Cma-Chr13:6528604 1.91E-127 dispersed
Cma13g00738 Cma-Chr13:6528604 Cma14g00201 Cma-Chr14:864110 1.30E-103 dispersed
Cma13g00738 Cma-Chr13:6528604 Cma06g00369 Cma-Chr6:1709568 1.99E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00738 K00430 - csv:101214168 626.32