Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g00803 ATGGCGACGACGACCACAAGTATTGGCGGCGGCGGCGGCGGTGGTGGGGAGGATAGAGTTATGGCTACCGCTCAGCAGATTGTTAAGAGCCTCAATACACCCAAGGAGGTTCAAGAAGACATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTTTCTAATATCTCCAGTTTGGTCAACAGTGGAGATTCGAAGAGGGAAGGGGATCGATATGAAGCTGCTGAGAAGCTGATTCTTCGTTGGGATTCTGGTCCTGGAGCTTCTCGGAACTCCCTTAATTGGGAGGATTCGCCGGAGGAGGCGGCTGAGTACTTATCGGCGGTGGATGATATCATTCAGTGGATCGATGACTTGTCAATTCGTTCGGATTCTGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAACACTGTCCCTCTCGATGCGGAGCATCTCTACGGTTCAATTCGGAAGGTTTCGCTCTCTTTTGCTTCACACGACAGCGAAAATTCCGATGAGTTTGAGTCGTTTGCCGATGTTGACCGTGGTTCTGGAATCTTCCATGAGCGTGGTGTCAGTTTGGGCGATGATTTGCGAGTCGATTTGATCAATCCTGACGCTGTCGTTGATTTGAAAGAGATTGCCGACCGGATGATTCGGTCTGGATACGAAAAAGAGTGTCTCAACGTGTATACTGGTGTCCGACGCGATGCTCTTGATGAATGCTTGGTGGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTCCAGAAAATTGATTGGAAGATCTTGGATGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTCCGAGTCCTTTTGACGGGCGAGAAGCGACTGTGTGACTATATCTTCAGCGGGTCCGATGACTCCGAGGAAGTCTGCTTCAATGAGACTGCTAAAGGGTGCATCAGGCAGTTACTGAATTTTGCAGAGGCCATTGCCATGGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAATACGTTTTGCCGGACTTGCAGGCTATGATCACTGATGAATTTGTGATTGAGGAGGCGCAAGGAGTGCTTTCTAGGCTGGGAGAGGCCGCTAAAGGTACATTTGTTGAGTTTGAGAATGCTGTTCGGAATGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGTAAGACTCTTGATGCACTTTTAGAAGGCGACGACGAAGATTTGCAGCACCTAGGGGGCGATGGTGCTGAAAATTCGGAGTTGGAAACTATGTCACCATTGCCTCGTCGGCTGTATTCATTGTTATCATCACTGGAGACCAATCTAGAAAGAAAATCCAAACTCTATGGCGATGATTCGATTCAATATATATTTCTCATGAACAATATACAATACATTGTGCAGAAAGCAAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGTAAGCGCCGAGGCCAGGTTCGCATATATGCGACGAACTATCTTAGGGCGTCTTGGGGTAAATTATTAACTTTCTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTGAAGGAAAAGTTCAAAAATTTCAATGCTGGCTTTGAGGAAATCTATAGAATTCAGACAGGTTGGAAGGTTGCCGATGCTCAACTACGAGAGGAGCTCCGAATTTCAGTATCGGCAAAAGCGCTACCTGCATATCGTGCCTTCTTGGGAAGGCATGGAAGTCAGTTAGAGAATACAAGACATGCTGGGAGGTATATAAAGTACACATCGGATGACTTGGAGAACTATTTATTGGATTTGTTTGAAGGATCACCACAAGTTATACACAACTTAAGAAGAAAAAGTAGTTCATAG 1974 45.74 MATTTTSIGGGGGGGGEDRVMATAQQIVKSLNTPKEVQEDMLLIFSSFDNRLSNISSLVNSGDSKREGDRYEAAEKLILRWDSGPGASRNSLNWEDSPEEAAEYLSAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHMLIRNTVPLDAEHLYGSIRKVSLSFASHDSENSDEFESFADVDRGSGIFHERGVSLGDDLRVDLINPDAVVDLKEIADRMIRSGYEKECLNVYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAMGERSVEKLFRILDMYEALEYVLPDLQAMITDEFVIEEAQGVLSRLGEAAKGTFVEFENAVRNETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDALLEGDDEDLQHLGGDGAENSELETMSPLPRRLYSLLSSLETNLERKSKLYGDDSIQYIFLMNNIQYIVQKAKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLTFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEEIYRIQTGWKVADAQLREELRISVSAKALPAYRAFLGRHGSQLENTRHAGRYIKYTSDDLENYLLDLFEGSPQVIHNLRRKSSS 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6823642 6825615 - CmaCh13G008030.1 Cma13g00803 306630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g00803 657 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 52 655 - -
Cma13g00803 657 SUPERFAMILY Cullin repeat-like 71 642 IPR016159 -
Cma13g00803 657 PANTHER EXOCYST COMPLEX PROTEIN EXO70 52 655 IPR004140 GO:0000145|GO:0006887
Cma13g00803 657 Gene3D Exocyst complex component Exo70 89 649 - -
Cma13g00803 657 Pfam Exo70 exocyst complex subunit 279 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g00035 Cma13g00803 CCT
Cma10g00065 Cma13g00803 CCT
Cma13g00803 Cma18g00319 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00010 Cma-Chr1:32956 Cma13g00803 Cma-Chr13:6823642 3.12E-146 dispersed
Cma01g00707 Cma-Chr1:3710679 Cma13g00803 Cma-Chr13:6823642 7.27E-123 dispersed
Cma13g00032 Cma-Chr13:383306 Cma13g00803 Cma-Chr13:6823642 2.32E-126 dispersed
Cma13g00803 Cma-Chr13:6823642 Cma14g01199 Cma-Chr14:9583679 6.69E-152 dispersed
Cma13g01074 Cma-Chr13:8116481 Cma13g00803 Cma-Chr13:6823642 1.52E-127 transposed
Cma10g00065 Cma-Chr10:249523 Cma13g00803 Cma-Chr13:6823642 0 wgd
Cma11g00035 Cma-Chr11:162015 Cma13g00803 Cma-Chr13:6823642 0 wgd
Cma13g00803 Cma-Chr13:6823642 Cma18g00319 Cma-Chr18:1702191 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g00803 K07195 - csv:101212753 1174.46