Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma13g01064 ATGTCTTTAGAGCATGAATTTCTGTTTGTTCCCGCATCTGGGTTTGCCTCAACAATGGCAAATAATGTCAATCTCTTTCTTTGTTTCCTTCTCTTTGTGGCTGTTTTTGGCCTTTGCCTTAGCCCCGGTGGTCTAGCTTGGGCTCTGGTTTCAAGGCCAAGAAACAAACCCATCATTCCTGGCCCTTGTGGCACTCCTTTTTTAGGTCAAGTTTCTACCTTTACTACTTCTCTCACTCATAGAGTTCTTGCCAACCTCGCTCATACCTTAAAGGCCAAATCTTTGATGTCATTCTCTGTTGGGTTCACTCGTTTTGTGATCTCTAGCAACCCCATCGCTGCCAAAGAGCTTTTAAACAGCTCGGCGTTTGCTGATCGTCCCATTAAGGAGTCAGCTTACGAGCTTTTGTTCCATAGAGCAATGGGGTTCGCTCCATATGGGGAGTATTGGAGGAACCTCAGGAGAATCTCAGCCACTCATTTGTTTAGCCCCAAAAGGATTTCTAATTTTGGGGGATTAAGGCAGAGAATTGGGGTTGAAATGGTGGAGGAAATTAAGGGTTTGATGGAAAAAAATGGGGAAATTGAAGTGAGGAAAGTCTTGCATTTTGGGTCGTTGAATAATGTTATGGGGAGTGTGTTTGGGAAAAGGTACGAGTTTTTTGGTGATGGTGGGAGTAATTCCGAGGTTGAGGGATTGGTGAGTGAAGGGTATGATTTGCTTGGGAGTTTCAATTGGAGTGATCACTTCCCTGTTTTGGGTTGGCTGGATTTGCAAGGCGTGAGAAAAAGGTGTAAAATTTTGGTGGGGAAAGTGAATGTTTTTGTTGGGAAAATCATAGAAGATCATAGAATGAATAGAAAAGGAAAGGGTGTTGTTCATAATGATAATGATGATGAACATGATGACACCAAATCTGGAGATTTCGTTGATGTATTGCTTGATTTGGAAAAGGAAAACAAGCTCACCGACTCTGATATGATTGCTGTGTTATGGGAAATGATCTTCCGAGGAACAGACACGGTGGCGATTCTCCTAGAATGGATATTAGCCAGAATGGTTCTTCATCCCGACATCCAAGCCAAACTCCAATCGGAAATCGACCGCGTTGTTATACCCGGCCGGAATGTCTCCGATTCCGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTTAAAGAGACACTAAGAATGCACCCTCCTGGCCCACTTCTCTCGTGGGCCCGCCTCGCCATCTACGACACCCACGTTGGCGGTCACTTCATTCCCGCCGGTACTACGGCGATGGTCAATATGTGGGCCATAACCCACGACGAACATATCTGGTCCGACCCGACAACATATGACCCAGAGAGGTTCGTTAAAGAGGAGGTGGCTATAATGGGGTCTGACCTACGGTTAGCACCGTTTGGATCTGGAAGACGGGTGTGCCCTGGGAAAGCCATGGGGTTAGCCACTGTGGAGCTTTGGCTAGCTCAGTTGGTTCAGAGGTTCAAATGGGTTCAGGTGGATGGTGGGTGTGGAAATGGCGTGGACTTGTCTGAGTGTTTGAAGCTGTCGCTGGAGATGAAACAGCCTTTAATCTGTAGGGCTGTTCCGAGGTTTTAG 1608 46.46 MSLEHEFLFVPASGFASTMANNVNLFLCFLLFVAVFGLCLSPGGLAWALVSRPRNKPIIPGPCGTPFLGQVSTFTTSLTHRVLANLAHTLKAKSLMSFSVGFTRFVISSNPIAAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFSPKRISNFGGLRQRIGVEMVEEIKGLMEKNGEIEVRKVLHFGSLNNVMGSVFGKRYEFFGDGGSNSEVEGLVSEGYDLLGSFNWSDHFPVLGWLDLQGVRKRCKILVGKVNVFVGKIIEDHRMNRKGKGVVHNDNDDEHDDTKSGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKLQSEIDRVVIPGRNVSDSDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIYDTHVGGHFIPAGTTAMVNMWAITHDEHIWSDPTTYDPERFVKEEVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVQRFKWVQVDGGCGNGVDLSECLKLSLEMKQPLICRAVPRF 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8065753 8067575 - CmaCh13G010640.1 Cma13g01064 306891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma13g01064 535 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PANTHER CYTOCHROME P450 78A5 18 531 - -
Cma13g01064 535 SUPERFAMILY Cytochrome P450 59 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 Pfam Cytochrome P450 60 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 Gene3D Cytochrome P450 48 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma13g01064 535 PANTHER STEROID 21-HYDROXYLASE-RELATED 18 531 - -
Cma13g01064 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00855 Cma-Chr8:5210732 Cma13g01064 Cma-Chr13:8065753 1.25E-175 dispersed
Cma12g00105 Cma-Chr12:425207 Cma13g01064 Cma-Chr13:8065753 0 dispersed
Cma13g01064 Cma-Chr13:8065753 Cma18g00699 Cma-Chr18:6378834 0 dispersed
Cma13g01064 Cma-Chr13:8065753 Cma05g00453 Cma-Chr5:2082462 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma13g01064 K20619 - csv:101203458 846.654