Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00011 ATGTGGACTTGTGTTTCAACAGACTTTCCGGAAGCCTGCCCAAGGAGCTCATTAATCTCTCCCACCTCCTCTCCTTTAATATCTCCCACAATCATCTTGAGGGAGAACTTCCAGTTGGGGGCTTCTTCAACACTATATCTCCCCTTCTCTATATCACATAACCCATCTCTTTGTGGTGCTGCTGTCAATACCTCCTGCCCCTCCCTCCATCCAAAACCGATTGTCCTAAACCCAAACTCTTCTGAGACCAATGGAAATTCCCCCTCCCACAACCATCCCCATCAGATCATACTTACCATATCTTTCATTATTGCTATTGCTGCAGCTTCTTTTATCCTACTTGGTGTAGTGGCTGTCACCATCCTCAATATCCATGCAAGGTCCTCACACTCACGGTCTGCTGCTCTTGTGTTATCTGCTGGGGAGGACTTTAGCTGCTCCCCCAAAACTAATCCAGAATATGGAAACTTCGTCATGTTTTGTGGAGATGCAGATTTTGTAGTTGGCGCCCAAACCTTACTGAACAAGGACGCTGAACTTGGTCGAGGTGGATTTGGGGTTGTTTACAAAACGGTGCTTCGAGATGGGTGTTTAGTTGCAATCAAGAAGCTAACTGTCACAAGCTTGATCAAGTCACGAGAAGATTTTGAGAGTGAAGTGAAGAAGCTGGGACAGATCAGGCATCACAATCTTGTGGCACTCGAAGGGTATTACTGGACAGCCTCCATGCAGCCCCTAATTTATGAATACCTCCCCAGTGGAAAACTGGCGACAATTGTTTGTCTTGGCGGCAGAGATTCAAGATTGTTCTTGGGATGGCCTAAGGGTTGGCGTATTTTCACCATAATGTCAACCAATGTTTTGATAGACAGTTCTGGGAAACCAAAAGTGGGGGACTATGGCTTGGCAAGGTTGTTGCCAATGTTGGACCGTTGCATCTTTAGCAGTAAAATCCAAAGTGCTTTGGGATACATGGCTCCAGAGTTCGCCTGCAAAACAGTGACTATAACTGAAAAGTGTGATGTGTATGGCTTTGGCATCTTGGCTTTGGAAGTGGTGACTGGAAAAAGACCTGTGGAGTACATGGAAGATGATCTGTGA 1101 45.96 MWTCVSTDFPEACPRSSLISPTSSPLISPTIILRENFQLGASSTLYLPFSISHNPSLCGAAVNTSCPSLHPKPIVLNPNSSETNGNSPSHNHPHQIILTISFIIAIAAASFILLGVVAVTILNIHARSSHSRSAALVLSAGEDFSCSPKTNPEYGNFVMFCGDADFVVGAQTLLNKDAELGRGGFGVVYKTVLRDGCLVAIKKLTVTSLIKSREDFESEVKKLGQIRHHNLVALEGYYWTASMQPLIYEYLPSGKLATIVCLGGRDSRLFLGWPKGWRIFTIMSTNVLIDSSGKPKVGDYGLARLLPMLDRCIFSSKIQSALGYMAPEFACKTVTITEKCDVYGFGILALEVVTGKRPVEYMEDDL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 58262 59410 + CmaCh14G000110.1 Cma14g00011 306994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00011 366 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 48 365 - -
Cma14g00011 366 Pfam Protein kinase domain 176 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00011 366 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 48 365 - -
Cma14g00011 366 SUPERFAMILY Protein kinase-like (PK-like) 178 361 IPR011009 -
Cma14g00011 366 Pfam Protein tyrosine and serine/threonine kinase 283 363 IPR001245 GO:0004672|GO:0006468
Cma14g00011 366 ProSiteProfiles Protein kinase domain profile. 174 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00011 366 ProSitePatterns Protein kinases ATP-binding region signature. 180 203 IPR017441 GO:0005524
Cma14g00011 366 Gene3D Transferase(Phosphotransferase) domain 1 280 366 - -
Cma14g00011 366 Gene3D Phosphorylase Kinase; domain 1 167 250 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00186 Cma14g00011 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00011 Cma-Chr14:58262 Cma15g00170 Cma-Chr15:777070 3.47E-127 dispersed
Cma14g00011 Cma-Chr14:58262 Cma06g00186 Cma-Chr6:954289 9.69E-162 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69040 PF07714 PK_Tyr_Ser-Thr 8.50E-12 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00011 - - csv:101222148 491.886