Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00018 ATGAATTGTAACGAGGAGAATAGAGGGGGAGATGATAGGGAAACTGAGGCGCCAGTTTTGAGGAACTCTGTTGAGGCAGAAGGGAAACCAGTCATCCAGAATGGATCCATAACAGACCAACACTTGACCATCGATGATAATCTTCTCGTTGATCCAAAATTACTGTTTATTGGATCCAAGATCGGCGAGGGTGCTCATGGGAAGGTTTATGAAGGCAGGTACCGGAACCAAATTGTGGCCGTTAAAGTTCTTCATCGAGGGAGTACTGCAGAAGAAAGGGCAGCGCTTGAAAATCGTTTTGCCCGTGAAGTAAATATGATGTCCCGAGTAAAACATGAAAATCTTGTCAAGTTTCTTGGAGCTTGTAAAGAACCTCTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTCAGGAAGTATCTGATGAATAATCGTAAGCAACAGCTGGACCCTCGGCTGGCCATTAACTTTGCTTTGGATATTGCTCGTGCTATGGATTGTCTACATGCAAATGGGATTATACATAGAGATCTCAAACCTGATAATTTGTTGCTTACTGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGACTTGCTAGAGAAGAATCTGTGACCGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGCTATATAGCACTGTGACATTGCGGCAGGGAGAGAAGAAGCATTACAACAACAAGGTGGACGTTTACAGCTTTGGAATTGTGTTATGGGAACTGTTGACCAACCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGACCGAGTATTCCAGGCGACATACCTCCAGATCTAGCATTTATCGTACAGTCGTGTTGGGTGGAAGATTCTAAGATGAGGCCCAGCTTCAGCCAGATCATCCGCATGCTTAATGCATATCTATTTACACTCCCACCTCCTTCTTCGCCGTCTTCACCGTCTTCACCAAAATCTGACACAACGGAGACACCAACGTCTAGTAATGGTACCATCACCGAGTTCTCTGCTCGTGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAGAGGGCTAAGAACTCGCAATAA 1134 45.15 MNCNEENRGGDDRETEAPVLRNSVEAEGKPVIQNGSITDQHLTIDDNLLVDPKLLFIGSKIGEGAHGKVYEGRYRNQIVAVKVLHRGSTAEERAALENRFAREVNMMSRVKHENLVKFLGACKEPLMVIVTELLPGMSLRKYLMNNRKQQLDPRLAINFALDIARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDSKMRPSFSQIIRMLNAYLFTLPPPSSPSSPSSPKSDTTETPTSSNGTITEFSARARGKFGFLRQLFAAKRAKNSQ 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 75726 78693 - CmaCh14G000180.1 Cma14g00018 307001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00018 377 PANTHER SERINE-THREONINE PROTEIN KINASE 18 353 - -
Cma14g00018 377 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Cma14g00018 377 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Cma14g00018 377 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Cma14g00018 377 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Cma14g00018 377 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00018 377 Gene3D Transferase(Phosphotransferase) domain 1 138 339 - -
Cma14g00018 377 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Cma14g00018 377 MobiDBLite consensus disorder prediction 326 353 - -
Cma14g00018 377 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00018 377 MobiDBLite consensus disorder prediction 333 353 - -
Cma14g00018 377 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 18 353 - -
Cma14g00018 377 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Cma14g00018 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Cma14g00018 377 SUPERFAMILY Protein kinase-like (PK-like) 53 347 IPR011009 -
Cma14g00018 377 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Cma14g00018 377 CDD STKc_MAP3K-like 61 316 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00194 Cma14g00018 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00092 Cma-Chr10:373193 Cma14g00018 Cma-Chr14:75726 2.59E-153 dispersed
Cma11g00066 Cma-Chr11:334910 Cma14g00018 Cma-Chr14:75726 3.93E-109 dispersed
Cma11g01458 Cma-Chr11:9621175 Cma14g00018 Cma-Chr14:75726 7.70E-146 dispersed
Cma14g00018 Cma-Chr14:75726 Cma14g00675 Cma-Chr14:3434476 4.96E-140 dispersed
Cma14g00018 Cma-Chr14:75726 Cma06g00194 Cma-Chr6:988739 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69041 PF07714 PK_Tyr_Ser-Thr 1.70E-61 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00018 - - cmax:111481423 723.005