Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00046 ATGGCTATGGGAGTTTCGTTAGCTTGCTTTGTCATATTTGTTTTCTATGTTTCTGCTCTTTCTGTTCAAGCCTCGTTTCTCTACCATGGATTCAATAATTCAGATCTTATCCTTCGTCAAGGAGCTTCTGTAGAGGCTTCTGGCTTGTTGAGGCTAACCGACAGCACCCAGTTCGTTATAGGCCAGGCTTTCAATCCTAATGCCCACCAGATGTTTGATAAAAGTTCTGAACCCGTTTTAGACGTTTCTTCTTTCAGCACAACTTTTGTGTTTGCCATAGTTCCATCAAGCCCCGGTTCGCCAGTTGGGTATGGCCTCGCCTTTGTTATGGCTCCATCGACCACATTTCCAGGTGCTGCAAGTGAACATTACTTGGGATTATTCAACTCCTCCAGCAACGGCAAGGCTTCCAATCATATCTTTGCAGTCGAATTCGATACTATTAATGGTCACGATGACCCTCAAAATTCGAAGGGAAACCATGTCGGAATCAACAAGAATGGCATGCGATCAAGTGCGTCTGAAACGGCTGAGTACTCTTATTATGGCTCTGATGTGAAAACGGAGGTGTATTTGGATAGTGGTGATCCAATCCAAGCTTGGATTGACTATAGTCGCCATAGTAAGGTTGTGAATGTCACGATAGCTCCTACAAATGTGGACAAACCAACTGAGCCATTGATTTCATATCCCATAAACCTGAATTCAGTTTTAAAAGAGACAATGTTTGTTGGGTTCTCTGCATCAACCGGAACAGAAACAAGCTTCCACTACATTTCAGGTTGGAGTTTTGCCATCAATGAACAAGCACCTGCGTTAAATGTTTCTCAGCTACCAAAACCACCGAAAGTGGACATTTCTCCGCCGTCAAAATTCAATCCTCTACTCACCGTTGTTGTACCAATATTATCTGCCATGACATTGATGGGAATTTGGTTCTTAGCCTCTTTATTCAGAAGAAGATTACGAGATGACAGCCTTGAGGAATGGGAAAGAGATTGTCCTCACAGATTTGGCTATAACGATCTTTATAAAGCCACAAAGGGATTTAAAGACTCTGAGCTCCTTGGATCAGGTGGCTTTGGCTCAGTATACAGAGGTGTCTTGCCTTTCACTGGAAGTGAAATTGCTGTGAAGAAGATAACACGAAATTCGACTCAGGGAATGAGGGAATTCGCTGCCGAGATCGAAAGTTTGGGCCGATTACGACACAAGAACTTGGTGAATCTCCAAGGATGGTGCAAGAAAAAGAATGATCTTCTCTTGGTTTATGACTATGTTTCAAATGGAAGCTTGGATTCTCTCCTCTACCATCCAAAACACAACTTTGTGCTGAATTGGGAACAAAGAATCAACATCCTCAAAGGCGTTGCTGGTGGATTGCTGTACCTACACGAAGAATGGGAGCAAGTAGTGATCCATCGAGATGTTAAGCCGAGTAATGTCTTGATAGATGTCGACATGAATGCTCGACTAAGTGATTTCGGTCTTGCAAGGTTATACGACCACGACCAAGTCTCGCATACAACCAGTGTCGTTGGCACCATTGGCTACATCTCACCCGAGTTGGCTCGCACCGGAAAAGCATCTAAAACCACGGATGTGTTCGCGTATGGAGTTCTAATCCTTGAAGTGGCTTGTGGAAGAAGACCTCTAGAATCAGATATATTCATATTGGTAGATTGGGTAATGGAATGCCATGAAAGAGGCCGTATTCTGGACGCAGCCGATCCGAAGTTGAGTGCAGTTTATGACATGAATGAGATGGAGATGGTGCTGCAACTTGGGCTTCTTTGTTCCCACTACAAACCTGAAGCAAGGCCAAGCATGAGGCAAGTCACGAGATATCTTAATGGAGACGACCAAATTCGTTCTGTTCATCCTCCAAATTATTCTCAAGTTACCTTCCAATCTAGCTCCGGATTCACTCAATTCATTCCACCGTCTTCGCAGACTTCATCTGCTAGTTTTATCTCAACCTCCATAGATCTAAGCAGGTAA 2001 43.73 MAMGVSLACFVIFVFYVSALSVQASFLYHGFNNSDLILRQGASVEASGLLRLTDSTQFVIGQAFNPNAHQMFDKSSEPVLDVSSFSTTFVFAIVPSSPGSPVGYGLAFVMAPSTTFPGAASEHYLGLFNSSSNGKASNHIFAVEFDTINGHDDPQNSKGNHVGINKNGMRSSASETAEYSYYGSDVKTEVYLDSGDPIQAWIDYSRHSKVVNVTIAPTNVDKPTEPLISYPINLNSVLKETMFVGFSASTGTETSFHYISGWSFAINEQAPALNVSQLPKPPKVDISPPSKFNPLLTVVVPILSAMTLMGIWFLASLFRRRLRDDSLEEWERDCPHRFGYNDLYKATKGFKDSELLGSGGFGSVYRGVLPFTGSEIAVKKITRNSTQGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDYVSNGSLDSLLYHPKHNFVLNWEQRINILKGVAGGLLYLHEEWEQVVIHRDVKPSNVLIDVDMNARLSDFGLARLYDHDQVSHTTSVVGTIGYISPELARTGKASKTTDVFAYGVLILEVACGRRPLESDIFILVDWVMECHERGRILDAADPKLSAVYDMNEMEMVLQLGLLCSHYKPEARPSMRQVTRYLNGDDQIRSVHPPNYSQVTFQSSSGFTQFIPPSSQTSSASFISTSIDLSR 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 199606 201606 + CmaCh14G000460.1 Cma14g00046 307029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00046 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 283 IPR013320 -
Cma14g00046 666 CDD STKc_IRAK 356 619 - -
Cma14g00046 666 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Cma14g00046 666 Pfam Protein kinase domain 350 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00046 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 10 655 - -
Cma14g00046 666 Pfam Legume lectin domain 24 279 IPR001220 GO:0030246
Cma14g00046 666 ProSitePatterns Protein kinases ATP-binding region signature. 356 380 IPR017441 GO:0005524
Cma14g00046 666 Gene3D Transferase(Phosphotransferase) domain 1 427 630 - -
Cma14g00046 666 MobiDBLite consensus disorder prediction 647 666 - -
Cma14g00046 666 CDD lectin_legume_LecRK_Arcelin_ConA 25 267 IPR001220 GO:0030246
Cma14g00046 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Cma14g00046 666 SUPERFAMILY Protein kinase-like (PK-like) 334 650 IPR011009 -
Cma14g00046 666 Gene3D - 22 277 - -
Cma14g00046 666 PANTHER - 10 655 - -
Cma14g00046 666 SMART serkin_6 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00046 666 ProSiteProfiles Protein kinase domain profile. 350 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00215 Cma14g00046 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00871 Cma-Chr1:4911606 Cma14g00046 Cma-Chr14:199606 0 dispersed
Cma14g00046 Cma-Chr14:199606 Cma14g00127 Cma-Chr14:535702 0 dispersed
Cma14g00046 Cma-Chr14:199606 Cma06g00215 Cma-Chr6:1099267 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69043 PF00069 Pkinase 3.60E-50 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00046 - - csv:101216151 1077.0