Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00061 ATGGAAGGACATCATCCCCATCACCTTATTCCGCTCCACCACCAGCAACAGTTTCAACTCCGTCCACCGTCGCATCTCCACCAGAGCCTCACCGTCTCCGCCGATCCAACCCTAGCCGCCCCCGACAGATTCCCTCAATGGAGCCTTCAGGAAACAAAGGAGTTTTTGACGATCAGAGCCGAGCTGGATCGGACTTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACATCCTCCAAAATGAAGGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACTCATTATAAGGGTTGTGAAACAATGGAGCCAGAAAATTTAAGGCAACAATTTCCATTCTACACAGAACTAAAAGCAATTTTCGGAGCAAGAATGCAAAGGATGTTCATGGCGGAGGCGGAGAGCGGTGGGAGTGGATCGAAGAAGAAGATGAAGACATTATCGTCCGATGACGAGGAAGAAAACGAAGACAGTAACGGCGACGGGGGCGAGACGAAGGTTAACAGCAGGAAGAGGAAGAAGGTTAAAGGCACGACGATGGCGACAGACGGCGGAGGGGGAAGCGGTAGCCGTTTGAAAGAAATATTGGAAGATTTCATGAATCAACAAATGCAAATGGAGGTGCAGTGGAGGGAGGCATTTGAGGCAAGGGAAAAGGAGAGGGAAATGAGGGAAATGGAGTGGAGAAGGAACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGTTGGAGGGAAAGAGAAGAACAAAGGAGAATAAGAGAGGAAATTAGGGGTGAGAAAAGAGATGCCTTAATCACAGCCTTGTTAAACAAGATTAGAAGAGATGATCATATGTAG 876 46.69 MEGHHPHHLIPLHHQQQFQLRPPSHLHQSLTVSADPTLAAPDRFPQWSLQETKEFLTIRAELDRTFMETKRNKLLWEITSSKMKEKGFNRSAEQCKCKWKNLVTHYKGCETMEPENLRQQFPFYTELKAIFGARMQRMFMAEAESGGSGSKKKMKTLSSDDEEENEDSNGDGGETKVNSRKRKKVKGTTMATDGGGGSGSRLKEILEDFMNQQMQMEVQWREAFEAREKEREMREMEWRRNMEALEHERIMLERSWREREEQRRIREEIRGEKRDALITALLNKIRRDDHM 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 265014 266339 - CmaCh14G000610.1 Cma14g00061 307044

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00061 291 Pfam Myb/SANT-like DNA-binding domain 46 130 IPR044822 -
Cma14g00061 291 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 288 - -
Cma14g00061 291 ProSiteProfiles Myb-like domain profile. 47 103 IPR001005 -
Cma14g00061 291 PANTHER - 1 288 - -
Cma14g00061 291 Gene3D - 47 108 - -
Cma14g00061 291 MobiDBLite consensus disorder prediction 142 200 - -
Cma14g00061 291 CDD GT1 45 110 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00061 - - - csv:101211490 374.015
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma03g00346 Cma14g00061 CCT
Cma06g00225 Cma14g00061 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00068 Cma-Chr5:288554 Cma14g00061 Cma-Chr14:265014 5.05E-13 dispersed
Cma14g00061 Cma-Chr14:265014 Cma04g01418 Cma-Chr4:7250979 2.46E-14 dispersed
Cma04g00583 Cma-Chr4:2963403 Cma14g00061 Cma-Chr14:265014 3.94E-43 transposed
Cma14g00061 Cma-Chr14:265014 Cma03g00346 Cma-Chr3:4145982 1.44E-50 wgd
Cma14g00061 Cma-Chr14:265014 Cma06g00225 Cma-Chr6:1153663 7.41E-112 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g254 . . . . . Bpe03g00998 . . Cmo06g00219 Cmo14g00054 Cma03g00346 . Car03g00305 . Sed03g2503 Cpe10g00956 Cpe08g01227 Bhi03g02150 Tan03g0783 Cmetu08g0507 . Hepe04g0748 . . Cla04g00701 Cam04g0711 Cec04g0833 Cco04g0886 Clacu04g0756 Cmu04g0746 Cre04g0799 . . . . Lsi01g01550 Csa04g01622 Chy08g00631 Cme04g02727 Blo07g01138 . . Bda05g00927 . . . . . Cmo03g00359 . Cma06g00225 Cma14g00061 Car06g00199 Car14g00043 Cpe03g00048 . Bhi11g01825 . . Lac10g3229 . . . Cla10g02096 Cam10g2176 Cec10g2214 Cco10g2200 Clacu10g2177 Cmu10g2917 Cre10g2318 Lsi03g02220 Csa03g03064 Chy04g02260 Cme08g02207
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma01g01874 . 61 399 Trihelix Transcription Factor Family AT1G12040 58.7 4.0e-45 180.6
Cma05g01334 CCT 161 341 Trihelix Transcription Factor Family AT1G12040 64.6 1.9e-42 171.8
Cma09g00199 . 51 391 Trihelix Transcription Factor Family AT1G12040 58.1 2.4e-42 171.4
Cma14g01740 CST 43 368 Trihelix Transcription Factor Family AT1G12040 57.0 6.9e-37 153.3
Cma17g00446 . 24 223 Trihelix Transcription Factor Family AT1G12040 58.7 1.5e-36 152.1
Cma05g01334 CCT 149 521 Trihelix Transcription Factor Family AT4G18670 82.1 9.0e-65 246.1
Cma09g00199 . 24 217 Trihelix Transcription Factor Family AT4G18670 71.8 1.1e-41 169.5
Cma01g01874 . 21 218 Trihelix Transcription Factor Family AT4G18670 61.8 9.1e-41 166.4
Cma08g00898 . 26 150 Trihelix Transcription Factor Family AT4G18670 64.0 1.3e-39 162.5
Cma08g00896 . 21 149 Trihelix Transcription Factor Family AT4G18670 59.7 1.2e-37 156.0
Cma06g01378 CST 37 370 Trihelix Transcription Factor Family AT4G18670 72.5 1.6e-37 155.6
Cma17g00446 . 30 223 Trihelix Transcription Factor Family AT4G18670 61.9 4.7e-37 154.1
Cma09g00199 . 2 394 Trihelix Transcription Factor Family AT3G19020 65.0 6.6e-61 233.4
Cma01g01874 . 2 395 Trihelix Transcription Factor Family AT3G19020 61.9 4.0e-58 224.2
Cma17g00446 . 12 391 Trihelix Transcription Factor Family AT3G19020 68.6 6.2e-51 200.3
Cma08g00896 . 4 148 Trihelix Transcription Factor Family AT3G19020 62.1 4.6e-46 184.1
Cma08g00898 . 7 149 Trihelix Transcription Factor Family AT3G19020 61.0 3.0e-45 181.4
Cma05g01334 CCT 149 510 Trihelix Transcription Factor Family AT3G19020 74.7 5.2e-42 170.6
Cma09g00199 . 2 395 Trihelix Transcription Factor Family AT1G49490 61.9 8.7e-52 203.0
Cma01g01874 . 5 396 Trihelix Transcription Factor Family AT1G49490 60.9 1.3e-50 199.1
Cma17g00446 . 12 391 Trihelix Transcription Factor Family AT1G49490 64.2 9.6e-43 172.9
Cma05g01334 CCT 178 510 Trihelix Transcription Factor Family AT1G49490 76.3 1.3e-42 172.6
Cma08g00898 . 53 384 Trihelix Transcription Factor Family AT1G49490 52.0 2.5e-38 158.3
Cma08g00896 . 52 149 Trihelix Transcription Factor Family AT1G49490 69.4 4.6e-37 154.1
Cma01g01874 . 15 416 Trihelix Transcription Factor Family AT2G15880 62.4 3.4e-65 247.3
Cma09g00199 . 14 416 Trihelix Transcription Factor Family AT2G15880 57.5 1.4e-58 225.3
Cma08g00898 . 22 409 Trihelix Transcription Factor Family AT2G15880 54.2 2.0e-52 204.9
Cma08g00896 . 21 383 Trihelix Transcription Factor Family AT2G15880 55.8 9.7e-52 202.6
Cma17g00446 . 30 391 Trihelix Transcription Factor Family AT2G15880 67.4 1.3e-51 202.2
Cma05g01334 CCT 149 510 Trihelix Transcription Factor Family AT2G15880 68.5 1.2e-41 169.1
Cma01g01874 . 5 409 Trihelix Transcription Factor Family AT4G33970 60.6 3.9e-58 223.8
Cma09g00199 . 5 399 Trihelix Transcription Factor Family AT4G33970 58.6 4.9e-53 206.8
Cma17g00446 . 21 409 Trihelix Transcription Factor Family AT4G33970 65.4 1.3e-48 192.2
Cma08g00898 . 18 384 Trihelix Transcription Factor Family AT4G33970 53.4 5.5e-44 176.8
Cma08g00896 . 17 397 Trihelix Transcription Factor Family AT4G33970 51.3 1.6e-43 175.3
Cma12g00058 . 1 192 Trihelix Transcription Factor Family AT1G13450 62.8 3.6e-69 258.8
Cma05g00068 . 1 198 Trihelix Transcription Factor Family AT1G13450 60.7 1.5e-67 253.4
Cma14g00061 CCT,CST 42 288 Trihelix Transcription Factor Family AT5G01380 57.3 3.4e-49 193.0
Cma06g00225 CCT,CST 80 323 Trihelix Transcription Factor Family AT5G01380 56.9 3.8e-48 189.5
Cma02g00969 CCT,CST 103 597 Trihelix Transcription Factor Family AT1G33240 53.3 1.7e-94 344.4
Cma09g01077 . 66 502 Trihelix Transcription Factor Family AT1G33240 51.3 9.9e-79 292.0
Cma05g01334 CCT 149 521 Trihelix Transcription Factor Family AT4G18670 82.1 9.0e-65 246.1
Cma09g00199 . 24 217 Trihelix Transcription Factor Family AT4G18670 71.8 1.1e-41 169.5
Cma01g01874 . 21 218 Trihelix Transcription Factor Family AT4G18670 61.8 9.1e-41 166.4
Cma08g00898 . 26 150 Trihelix Transcription Factor Family AT4G18670 64.0 1.3e-39 162.5
Cma08g00896 . 21 149 Trihelix Transcription Factor Family AT4G18670 59.7 1.2e-37 156.0
Cma06g01378 CST 37 370 Trihelix Transcription Factor Family AT4G18670 72.5 1.6e-37 155.6
Cma17g00446 . 30 223 Trihelix Transcription Factor Family AT4G18670 61.9 4.7e-37 154.1
Cma01g01874 . 5 409 Trihelix Transcription Factor Family AT4G33970 60.6 3.9e-58 223.8
Cma09g00199 . 5 399 Trihelix Transcription Factor Family AT4G33970 58.6 4.9e-53 206.8
Cma17g00446 . 21 409 Trihelix Transcription Factor Family AT4G33970 65.4 1.3e-48 192.2
Cma08g00898 . 18 384 Trihelix Transcription Factor Family AT4G33970 53.4 5.5e-44 176.8
Cma08g00896 . 17 397 Trihelix Transcription Factor Family AT4G33970 51.3 1.6e-43 175.3
Cma09g01077 . 61 502 Trihelix Transcription Factor Family AT1G76880 61.3 1.2e-111 401.4
Cma01g01012 . 64 549 Trihelix Transcription Factor Family AT1G76880 51.8 4.3e-98 356.3
Cma20g01075 . 24 413 Trihelix Transcription Factor Family AT1G76880 50.6 1.6e-92 337.8
Cma14g00286 CST 109 382 Trihelix Transcription Factor Family AT3G10000 52.5 1.0e-62 238.4
Cma09g00199 . 2 394 Trihelix Transcription Factor Family AT3G19020 65.0 6.6e-61 233.4
Cma01g01874 . 2 395 Trihelix Transcription Factor Family AT3G19020 61.9 4.0e-58 224.2
Cma17g00446 . 12 391 Trihelix Transcription Factor Family AT3G19020 68.6 6.2e-51 200.3
Cma08g00896 . 4 148 Trihelix Transcription Factor Family AT3G19020 62.1 4.6e-46 184.1
Cma08g00898 . 7 149 Trihelix Transcription Factor Family AT3G19020 61.0 3.0e-45 181.4
Cma05g01334 CCT 149 510 Trihelix Transcription Factor Family AT3G19020 74.7 5.2e-42 170.6
Cma09g00199 . 2 395 Trihelix Transcription Factor Family AT1G49490 61.9 8.7e-52 203.0
Cma01g01874 . 5 396 Trihelix Transcription Factor Family AT1G49490 60.9 1.3e-50 199.1
Cma17g00446 . 12 391 Trihelix Transcription Factor Family AT1G49490 64.2 9.6e-43 172.9
Cma05g01334 CCT 178 510 Trihelix Transcription Factor Family AT1G49490 76.3 1.3e-42 172.6
Cma08g00898 . 53 384 Trihelix Transcription Factor Family AT1G49490 52.0 2.5e-38 158.3
Cma08g00896 . 52 149 Trihelix Transcription Factor Family AT1G49490 69.4 4.6e-37 154.1
Cma18g01062 CCT 271 673 Trihelix Transcription Factor Family AT1G68690 63.1 1.1e-137 488.0
Cma04g02839 CST 1064 1475 Trihelix Transcription Factor Family AT1G68690 62.0 1.5e-136 484.2
Cma15g00198 CST 317 692 Trihelix Transcription Factor Family AT1G68690 64.7 9.8e-136 481.5
Cma04g01733 CCT 298 689 Trihelix Transcription Factor Family AT1G68690 61.9 1.7e-127 454.1
Cma04g01554 . 3 375 Trihelix Transcription Factor Family AT1G68690 63.2 1.7e-127 454.1
Cma18g00798 CCT 321 659 Trihelix Transcription Factor Family AT1G68690 64.9 1.3e-119 427.9
Cma12g01250 CCT 281 569 Trihelix Transcription Factor Family AT1G68690 65.4 4.0e-113 406.4
Cma11g00611 CCT,CST 842 1130 Trihelix Transcription Factor Family AT1G68690 65.1 1.3e-111 401.4
Cma10g00621 CCT,CST 306 594 Trihelix Transcription Factor Family AT1G68690 65.4 2.9e-111 400.2
Cma20g00855 CST 371 659 Trihelix Transcription Factor Family AT1G68690 63.3 4.3e-107 386.3
Cma02g00405 CST 294 582 Trihelix Transcription Factor Family AT1G68690 61.6 3.1e-105 380.2
Cma04g00778 . 753 1040 Trihelix Transcription Factor Family AT1G68690 61.2 7.6e-104 375.6
Cma02g01711 CST 357 637 Trihelix Transcription Factor Family AT1G68690 57.0 1.2e-85 315.1
Cma19g00126 CST 475 755 Trihelix Transcription Factor Family AT1G68690 56.3 1.3e-84 311.6
Cma14g00938 CST 361 649 Trihelix Transcription Factor Family AT1G68690 55.5 1.8e-84 311.2
Cma01g00283 CST 362 650 Trihelix Transcription Factor Family AT1G68690 55.1 3.3e-83 307.0
Cma11g00695 CST 328 613 Trihelix Transcription Factor Family AT1G68690 54.3 2.0e-80 297.7
Cma10g00720 CST 532 813 Trihelix Transcription Factor Family AT1G68690 54.4 1.7e-79 294.7
Cma16g00856 CST 57 350 Trihelix Transcription Factor Family AT1G68690 50.8 1.9e-78 291.2
Cma17g00725 . 442 723 Trihelix Transcription Factor Family AT1G68690 53.7 5.5e-78 289.7
Cma08g00773 . 831 1112 Trihelix Transcription Factor Family AT1G68690 54.0 7.2e-78 289.3
Cma17g01421 . 73 357 Trihelix Transcription Factor Family AT1G68690 50.7 3.6e-77 287.0
Cma08g00010 . 73 357 Trihelix Transcription Factor Family AT1G68690 50.7 4.6e-77 286.6
Cma06g00343 . 63 367 Trihelix Transcription Factor Family AT1G68690 50.6 7.9e-77 285.8
Cma01g02016 CCT,CST,ECH 45 326 Trihelix Transcription Factor Family AT1G68690 51.6 1.0e-76 285.4
Cma14g01637 CST 148 432 Trihelix Transcription Factor Family AT1G68690 51.0 2.3e-76 284.3
Cma06g01475 CST 72 356 Trihelix Transcription Factor Family AT1G68690 50.7 3.9e-76 283.5
Cma12g00680 CCT,CST,ECH 44 324 Trihelix Transcription Factor Family AT1G68690 50.7 8.8e-76 282.3
Cma04g00257 CST,ECH 61 345 Trihelix Transcription Factor Family AT1G68690 50.3 4.8e-74 276.6
Cma04g01234 CST,ECH 69 354 Trihelix Transcription Factor Family AT1G68690 50.5 1.1e-73 275.4
Cma04g02839 CST 1057 1421 Trihelix Transcription Factor Family AT1G26150 63.1 4.3e-120 429.5
Cma18g01062 CCT 303 618 Trihelix Transcription Factor Family AT1G26150 66.8 6.1e-114 409.1
Cma15g00198 CST 315 638 Trihelix Transcription Factor Family AT1G26150 63.5 2.8e-111 400.2
Cma04g01554 . 13 320 Trihelix Transcription Factor Family AT1G26150 66.3 4.1e-110 396.4
Cma04g01733 CCT 294 635 Trihelix Transcription Factor Family AT1G26150 57.5 3.1e-102 370.2
Cma12g01250 CCT 281 515 Trihelix Transcription Factor Family AT1G26150 68.9 4.7e-98 356.3
Cma18g00798 CCT 298 605 Trihelix Transcription Factor Family AT1G26150 59.1 1.5e-96 351.3
Cma11g00611 CCT,CST 839 1076 Trihelix Transcription Factor Family AT1G26150 68.3 2.0e-96 350.9
Cma10g00621 CCT,CST 307 540 Trihelix Transcription Factor Family AT1G26150 67.5 2.8e-95 347.1
Cma02g00405 CST 295 528 Trihelix Transcription Factor Family AT1G26150 66.2 2.0e-93 340.9
Cma04g00778 . 753 986 Trihelix Transcription Factor Family AT1G26150 65.5 1.0e-92 338.6
Cma20g00855 CST 372 605 Trihelix Transcription Factor Family AT1G26150 66.7 5.5e-91 332.8
Cma10g00720 CST 525 762 Trihelix Transcription Factor Family AT1G26150 58.8 1.1e-75 282.0
Cma11g00695 CST 325 562 Trihelix Transcription Factor Family AT1G26150 58.4 7.3e-75 279.3
Cma14g00938 CST 362 598 Trihelix Transcription Factor Family AT1G26150 60.1 1.6e-74 278.1
Cma14g01270 CST 379 614 Trihelix Transcription Factor Family AT1G26150 54.2 8.0e-74 275.8
Cma01g00283 CST 363 599 Trihelix Transcription Factor Family AT1G26150 59.7 1.4e-73 275.0
Cma06g00343 . 47 307 Trihelix Transcription Factor Family AT1G26150 53.3 4.0e-73 273.5
Cma02g01711 CST 352 586 Trihelix Transcription Factor Family AT1G26150 58.3 4.0e-73 273.5
Cma01g00070 CST 387 622 Trihelix Transcription Factor Family AT1G26150 54.2 6.8e-73 272.7
Cma19g00126 CST 470 704 Trihelix Transcription Factor Family AT1G26150 57.4 2.6e-72 270.8
Cma05g00175 . 259 488 Trihelix Transcription Factor Family AT1G26150 55.2 7.5e-72 269.2
Cma19g00663 . 142 370 Trihelix Transcription Factor Family AT1G26150 55.5 9.8e-72 268.9
Cma11g01100 . 142 370 Trihelix Transcription Factor Family AT1G26150 54.6 2.2e-71 267.7
Cma17g00725 . 416 672 Trihelix Transcription Factor Family AT1G26150 52.9 3.7e-71 266.9
Cma02g00038 CCT 173 402 Trihelix Transcription Factor Family AT1G26150 56.0 6.4e-71 266.2
Cma08g00010 . 49 304 Trihelix Transcription Factor Family AT1G26150 52.3 2.4e-70 264.2
Cma17g01421 . 69 304 Trihelix Transcription Factor Family AT1G26150 55.1 3.2e-70 263.8
Cma08g00773 . 805 1061 Trihelix Transcription Factor Family AT1G26150 52.9 4.1e-70 263.5
Cma12g00680 CCT,CST,ECH 44 273 Trihelix Transcription Factor Family AT1G26150 56.5 2.0e-69 261.2
Cma04g01234 CST,ECH 69 300 Trihelix Transcription Factor Family AT1G26150 56.5 4.6e-69 260.0
Cma06g01080 . 145 374 Trihelix Transcription Factor Family AT1G26150 52.2 4.6e-69 260.0
Cma04g00002 . 717 946 Trihelix Transcription Factor Family AT1G26150 53.0 7.8e-69 259.2
Cma01g02016 CCT,CST,ECH 45 274 Trihelix Transcription Factor Family AT1G26150 55.2 7.8e-69 259.2
Cma04g00257 CST,ECH 61 292 Trihelix Transcription Factor Family AT1G26150 56.0 1.0e-68 258.8
Cma07g00696 CST 174 403 Trihelix Transcription Factor Family AT1G26150 51.3 1.7e-68 258.1
Cma11g01962 . 180 409 Trihelix Transcription Factor Family AT1G26150 55.2 1.7e-68 258.1
Cma04g00977 . 719 948 Trihelix Transcription Factor Family AT1G26150 54.3 2.3e-68 257.7
Cma19g01083 CCT 180 409 Trihelix Transcription Factor Family AT1G26150 54.7 5.0e-68 256.5
Cma14g01637 CST 146 379 Trihelix Transcription Factor Family AT1G26150 55.1 5.0e-68 256.5
Cma03g00971 CST 171 400 Trihelix Transcription Factor Family AT1G26150 50.9 8.6e-68 255.8
Cma14g02059 . 146 375 Trihelix Transcription Factor Family AT1G26150 51.3 8.6e-68 255.8
Cma06g01475 CST 70 303 Trihelix Transcription Factor Family AT1G26150 54.7 1.5e-67 255.0
Cma13g00169 . 79 322 Trihelix Transcription Factor Family AT1G26150 52.9 1.5e-67 255.0
Cma14g01360 CST 15 257 Trihelix Transcription Factor Family AT1G26150 51.4 1.5e-67 255.0
Cma11g01895 CST 74 309 Trihelix Transcription Factor Family AT1G26150 52.1 3.3e-67 253.8
Cma19g01094 . 688 917 Trihelix Transcription Factor Family AT1G26150 54.3 2.1e-66 251.1
Cma04g01733 CCT 306 585 Trihelix Transcription Factor Family AT1G23540 63.0 3.2e-92 336.7
Cma18g00798 CCT 272 555 Trihelix Transcription Factor Family AT1G23540 61.7 3.6e-88 323.2
Cma04g00778 . 662 937 Trihelix Transcription Factor Family AT1G23540 54.1 1.9e-76 284.3
Cma11g00611 CCT,CST 837 1026 Trihelix Transcription Factor Family AT1G23540 71.6 3.2e-76 283.5
Cma04g02839 CST 1116 1371 Trihelix Transcription Factor Family AT1G23540 53.1 1.3e-74 278.1
Cma10g00621 CCT,CST 303 490 Trihelix Transcription Factor Family AT1G23540 71.3 3.0e-74 276.9
Cma15g00198 CST 411 588 Trihelix Transcription Factor Family AT1G23540 72.5 4.3e-73 273.1
Cma12g01250 CCT 281 465 Trihelix Transcription Factor Family AT1G23540 69.2 9.6e-73 271.9
Cma02g00405 CST 291 478 Trihelix Transcription Factor Family AT1G23540 65.4 1.5e-70 264.6
Cma18g01062 CCT 383 569 Trihelix Transcription Factor Family AT1G23540 65.2 2.9e-69 260.4
Cma04g01554 . 84 270 Trihelix Transcription Factor Family AT1G23540 66.8 3.8e-69 260.0
Cma20g00855 CST 368 555 Trihelix Transcription Factor Family AT1G23540 64.4 1.9e-68 257.7
Cma14g01087 . 604 786 Trihelix Transcription Factor Family AT1G23540 54.6 5.8e-54 209.5
Cma02g00038 CCT 160 352 Trihelix Transcription Factor Family AT1G23540 52.6 1.1e-52 205.3
Cma11g01962 . 167 359 Trihelix Transcription Factor Family AT1G23540 52.1 1.4e-52 204.9
Cma19g01083 CCT 167 359 Trihelix Transcription Factor Family AT1G23540 52.1 2.5e-52 204.1
Cma05g00175 . 248 438 Trihelix Transcription Factor Family AT1G23540 52.1 4.2e-52 203.4
Cma06g00176 . 609 791 Trihelix Transcription Factor Family AT1G23540 52.5 9.3e-52 202.2
Cma20g00260 CST 571 763 Trihelix Transcription Factor Family AT1G23540 52.1 9.3e-52 202.2
Cma11g01100 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.3 1.2e-51 201.8
Cma03g00971 CST 160 350 Trihelix Transcription Factor Family AT1G23540 51.6 2.7e-51 200.7
Cma14g00001 . 615 797 Trihelix Transcription Factor Family AT1G23540 53.6 3.5e-51 200.3
Cma06g01080 . 134 324 Trihelix Transcription Factor Family AT1G23540 51.0 3.5e-51 200.3
Cma07g00696 CST 163 353 Trihelix Transcription Factor Family AT1G23540 51.0 4.6e-51 199.9
Cma19g00663 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.3 1.0e-50 198.7
Cma02g01711 CST 357 536 Trihelix Transcription Factor Family AT1G23540 54.4 1.8e-50 198.0
Cma04g02831 CST 294 470 Trihelix Transcription Factor Family AT1G23540 57.5 2.3e-50 197.6
Cma10g00720 CST 519 712 Trihelix Transcription Factor Family AT1G23540 51.8 6.7e-50 196.1
Cma05g01058 . 132 325 Trihelix Transcription Factor Family AT1G23540 50.8 6.7e-50 196.1
Cma01g02016 CCT,CST,ECH 45 225 Trihelix Transcription Factor Family AT1G23540 53.6 1.5e-49 194.9
Cma19g00126 CST 475 654 Trihelix Transcription Factor Family AT1G23540 53.3 2.5e-49 194.1
Cma17g00725 . 441 622 Trihelix Transcription Factor Family AT1G23540 51.6 7.4e-49 192.6
Cma19g01096 . 696 873 Trihelix Transcription Factor Family AT1G23540 52.2 9.6e-49 192.2
Cma11g00695 CST 332 512 Trihelix Transcription Factor Family AT1G23540 52.5 9.6e-49 192.2
Cma08g00773 . 830 1011 Trihelix Transcription Factor Family AT1G23540 52.7 1.3e-48 191.8
Cma16g00247 . 277 457 Trihelix Transcription Factor Family AT1G23540 55.2 2.8e-48 190.7
Cma14g00938 CST 361 548 Trihelix Transcription Factor Family AT1G23540 53.7 1.8e-47 188.0
Cma04g00977 . 719 897 Trihelix Transcription Factor Family AT1G23540 51.4 1.8e-47 188.0
Cma01g00283 CST 368 549 Trihelix Transcription Factor Family AT1G23540 54.4 5.3e-47 186.4
Cma19g01094 . 688 865 Trihelix Transcription Factor Family AT1G23540 51.7 9.0e-47 185.7
Cma05g00068 . 1 375 Trihelix Transcription Factor Family AT3G25990 66.9 5.2e-142 501.5
Cma12g00058 . 1 415 Trihelix Transcription Factor Family AT3G25990 62.0 4.8e-140 495.0
Cma01g01874 . 61 399 Trihelix Transcription Factor Family AT1G12040 58.7 4.0e-45 180.6
Cma05g01334 CCT 161 341 Trihelix Transcription Factor Family AT1G12040 64.6 1.9e-42 171.8
Cma09g00199 . 51 391 Trihelix Transcription Factor Family AT1G12040 58.1 2.4e-42 171.4
Cma14g01740 CST 43 368 Trihelix Transcription Factor Family AT1G12040 57.0 6.9e-37 153.3
Cma17g00446 . 24 223 Trihelix Transcription Factor Family AT1G12040 58.7 1.5e-36 152.1
Cma14g00061 CCT,CST 1 291 Trihelix Transcription Factor Family AT2G38250 59.7 4.9e-55 212.2
Cma06g00225 CCT,CST 77 326 Trihelix Transcription Factor Family AT2G38250 62.5 5.9e-53 205.3
Cma04g02839 CST 1112 1554 Trihelix Transcription Factor Family AT5G38560 70.3 2.0e-171 600.1
Cma15g00198 CST 319 740 Trihelix Transcription Factor Family AT5G38560 70.2 3.8e-167 585.9
Cma18g01062 CCT 290 731 Trihelix Transcription Factor Family AT5G38560 60.0 1.6e-149 527.3
Cma04g01554 . 2 433 Trihelix Transcription Factor Family AT5G38560 59.8 8.3e-138 488.4
Cma04g01733 CCT 281 757 Trihelix Transcription Factor Family AT5G38560 55.3 1.6e-136 484.2
Cma18g00798 CCT 268 716 Trihelix Transcription Factor Family AT5G38560 55.3 1.4e-129 461.1
Cma12g01250 CCT 285 624 Trihelix Transcription Factor Family AT5G38560 62.6 5.2e-124 442.6
Cma11g00611 CCT,CST 826 1189 Trihelix Transcription Factor Family AT5G38560 60.7 4.9e-122 436.0
Cma10g00621 CCT,CST 310 660 Trihelix Transcription Factor Family AT5G38560 59.8 7.8e-120 428.7
Cma02g00405 CST 301 647 Trihelix Transcription Factor Family AT5G38560 59.6 3.7e-114 409.8
Cma04g00778 . 757 1088 Trihelix Transcription Factor Family AT5G38560 60.6 4.1e-113 406.4
Cma20g00855 CST 378 686 Trihelix Transcription Factor Family AT5G38560 61.7 1.1e-108 391.7
Cma14g00938 CST 365 666 Trihelix Transcription Factor Family AT5G38560 53.6 1.1e-84 312.0
Cma14g01270 CST 385 669 Trihelix Transcription Factor Family AT5G38560 52.9 3.1e-84 310.5
Cma01g00070 CST 393 677 Trihelix Transcription Factor Family AT5G38560 52.9 9.0e-84 308.9
Cma01g00283 CST 369 669 Trihelix Transcription Factor Family AT5G38560 53.4 9.0e-84 308.9
Cma02g01711 CST 357 651 Trihelix Transcription Factor Family AT5G38560 52.3 3.5e-80 297.0
Cma19g00126 CST 475 769 Trihelix Transcription Factor Family AT5G38560 51.7 2.3e-79 294.3
Cma10g00720 CST 532 817 Trihelix Transcription Factor Family AT5G38560 53.3 8.7e-79 292.4
Cma11g00695 CST 332 635 Trihelix Transcription Factor Family AT5G38560 50.8 2.5e-78 290.8
Cma17g00725 . 442 727 Trihelix Transcription Factor Family AT5G38560 52.1 7.4e-78 289.3
Cma08g00773 . 831 1127 Trihelix Transcription Factor Family AT5G38560 50.8 9.6e-78 288.9
Cma11g01962 . 179 464 Trihelix Transcription Factor Family AT5G38560 50.9 4.5e-75 280.0
Cma19g01083 CCT 179 464 Trihelix Transcription Factor Family AT5G38560 50.2 4.9e-74 276.6
Cma06g00343 . 76 365 Trihelix Transcription Factor Family AT5G38560 50.3 3.2e-73 273.9
Cma12g00680 CCT,CST,ECH 44 324 Trihelix Transcription Factor Family AT5G38560 50.5 1.0e-71 268.9
Cma12g01250 CCT 288 649 Trihelix Transcription Factor Family AT4G32710 63.6 4.7e-123 439.5
Cma11g00611 CCT,CST 830 1175 Trihelix Transcription Factor Family AT4G32710 63.0 3.5e-118 423.3
Cma10g00621 CCT,CST 313 672 Trihelix Transcription Factor Family AT4G32710 62.3 7.8e-118 422.2
Cma02g00405 CST 301 661 Trihelix Transcription Factor Family AT4G32710 58.2 1.1e-114 411.8
Cma20g00855 CST 378 735 Trihelix Transcription Factor Family AT4G32710 58.7 4.6e-110 396.4
Cma04g00778 . 712 1066 Trihelix Transcription Factor Family AT4G32710 56.1 7.3e-108 389.0
Cma04g01733 CCT 357 755 Trihelix Transcription Factor Family AT4G32710 53.1 1.4e-106 384.8
Cma15g00198 CST 384 715 Trihelix Transcription Factor Family AT4G32710 57.6 2.0e-105 380.9
Cma04g02839 CST 1194 1492 Trihelix Transcription Factor Family AT4G32710 63.0 7.6e-105 379.0
Cma18g00798 CCT 332 714 Trihelix Transcription Factor Family AT4G32710 54.8 2.9e-104 377.1
Cma18g01062 CCT 331 682 Trihelix Transcription Factor Family AT4G32710 53.2 1.6e-99 361.3
Cma04g01554 . 90 403 Trihelix Transcription Factor Family AT4G32710 59.0 4.0e-98 356.7
Cma19g00126 CST 475 760 Trihelix Transcription Factor Family AT4G32710 51.0 1.9e-76 284.6
Cma04g01733 CCT 295 775 Trihelix Transcription Factor Family AT1G70460 64.5 3.5e-163 572.8
Cma18g00798 CCT 294 714 Trihelix Transcription Factor Family AT1G70460 68.3 4.3e-153 539.3
Cma04g02839 CST 1070 1521 Trihelix Transcription Factor Family AT1G70460 56.9 1.0e-138 491.5
Cma15g00198 CST 411 738 Trihelix Transcription Factor Family AT1G70460 72.3 6.8e-135 478.8
Cma12g01250 CCT 280 631 Trihelix Transcription Factor Family AT1G70460 65.1 9.6e-129 458.4
Cma11g00611 CCT,CST 836 1179 Trihelix Transcription Factor Family AT1G70460 65.4 2.4e-127 453.8
Cma10g00621 CCT,CST 303 643 Trihelix Transcription Factor Family AT1G70460 65.7 3.8e-125 446.4
Cma18g01062 CCT 383 728 Trihelix Transcription Factor Family AT1G70460 63.7 8.4e-125 445.3
Cma04g01554 . 84 420 Trihelix Transcription Factor Family AT1G70460 66.0 2.4e-124 443.7
Cma04g00778 . 750 1092 Trihelix Transcription Factor Family AT1G70460 62.5 1.5e-118 424.5
Cma02g00405 CST 291 631 Trihelix Transcription Factor Family AT1G70460 61.3 2.6e-118 423.7
Cma20g00855 CST 368 687 Trihelix Transcription Factor Family AT1G70460 63.1 1.0e-114 411.8
Cma14g01270 CST 378 672 Trihelix Transcription Factor Family AT1G70460 51.2 5.5e-84 309.7
Cma01g00070 CST 386 680 Trihelix Transcription Factor Family AT1G70460 50.8 7.9e-83 305.8
Cma14g00938 CST 361 653 Trihelix Transcription Factor Family AT1G70460 53.7 8.2e-80 295.8
Cma01g00283 CST 368 654 Trihelix Transcription Factor Family AT1G70460 53.8 4.5e-78 290.0
Cma02g01711 CST 357 641 Trihelix Transcription Factor Family AT1G70460 52.4 1.0e-77 288.9
Cma10g00720 CST 527 817 Trihelix Transcription Factor Family AT1G70460 50.8 2.9e-77 287.3
Cma19g00126 CST 475 759 Trihelix Transcription Factor Family AT1G70460 51.7 2.5e-76 284.3
Cma11g00695 CST 332 617 Trihelix Transcription Factor Family AT1G70460 50.2 2.5e-76 284.3
Cma01g02016 CCT,CST,ECH 45 331 Trihelix Transcription Factor Family AT1G70460 50.3 4.7e-75 280.0
Cma08g00773 . 830 1116 Trihelix Transcription Factor Family AT1G70460 50.7 6.1e-75 279.6
Cma09g00051 CCT,CST,ECH 55 341 Trihelix Transcription Factor Family AT1G70460 50.3 2.6e-73 274.2
Cma01g01874 . 15 416 Trihelix Transcription Factor Family AT2G15880 62.4 3.4e-65 247.3
Cma09g00199 . 14 416 Trihelix Transcription Factor Family AT2G15880 57.5 1.4e-58 225.3
Cma08g00898 . 22 409 Trihelix Transcription Factor Family AT2G15880 54.2 2.0e-52 204.9
Cma08g00896 . 21 383 Trihelix Transcription Factor Family AT2G15880 55.8 9.7e-52 202.6
Cma17g00446 . 30 391 Trihelix Transcription Factor Family AT2G15880 67.4 1.3e-51 202.2
Cma05g01334 CCT 149 510 Trihelix Transcription Factor Family AT2G15880 68.5 1.2e-41 169.1
Cma14g00286 CST 109 410 Trihelix Transcription Factor Family AT5G03680 56.8 1.4e-80 298.1
Cma06g00453 CCT,CST 69 383 Trihelix Transcription Factor Family AT5G03680 52.9 1.7e-75 281.2
Cma04g01418 . 122 219 Trihelix Transcription Factor Family AT5G03680 79.6 3.3e-42 170.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002560 1 3 1 1 1 2 3 2 2 2 2 2 3 2 2 3 2 0 3 2 2 2 2 2 2 2 2 3 2 1 59
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36161 PF13837 Myb_DNA-bind_4 2.80E-17 CL0123 Cma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma14g00061 Cma_Chr14 FPKM 1.48072 1.598478 1.808816 1.770674 0.231455 0.0 0.506879 26.184864 29.679976 26.40074