Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g00061 | ATGGAAGGACATCATCCCCATCACCTTATTCCGCTCCACCACCAGCAACAGTTTCAACTCCGTCCACCGTCGCATCTCCACCAGAGCCTCACCGTCTCCGCCGATCCAACCCTAGCCGCCCCCGACAGATTCCCTCAATGGAGCCTTCAGGAAACAAAGGAGTTTTTGACGATCAGAGCCGAGCTGGATCGGACTTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACATCCTCCAAAATGAAGGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACTCATTATAAGGGTTGTGAAACAATGGAGCCAGAAAATTTAAGGCAACAATTTCCATTCTACACAGAACTAAAAGCAATTTTCGGAGCAAGAATGCAAAGGATGTTCATGGCGGAGGCGGAGAGCGGTGGGAGTGGATCGAAGAAGAAGATGAAGACATTATCGTCCGATGACGAGGAAGAAAACGAAGACAGTAACGGCGACGGGGGCGAGACGAAGGTTAACAGCAGGAAGAGGAAGAAGGTTAAAGGCACGACGATGGCGACAGACGGCGGAGGGGGAAGCGGTAGCCGTTTGAAAGAAATATTGGAAGATTTCATGAATCAACAAATGCAAATGGAGGTGCAGTGGAGGGAGGCATTTGAGGCAAGGGAAAAGGAGAGGGAAATGAGGGAAATGGAGTGGAGAAGGAACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGTTGGAGGGAAAGAGAAGAACAAAGGAGAATAAGAGAGGAAATTAGGGGTGAGAAAAGAGATGCCTTAATCACAGCCTTGTTAAACAAGATTAGAAGAGATGATCATATGTAG | 876 | 46.69 | MEGHHPHHLIPLHHQQQFQLRPPSHLHQSLTVSADPTLAAPDRFPQWSLQETKEFLTIRAELDRTFMETKRNKLLWEITSSKMKEKGFNRSAEQCKCKWKNLVTHYKGCETMEPENLRQQFPFYTELKAIFGARMQRMFMAEAESGGSGSKKKMKTLSSDDEEENEDSNGDGGETKVNSRKRKKVKGTTMATDGGGGSGSRLKEILEDFMNQQMQMEVQWREAFEAREKEREMREMEWRRNMEALEHERIMLERSWREREEQRRIREEIRGEKRDALITALLNKIRRDDHM | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 265014 | 266339 | - | CmaCh14G000610.1 | Cma14g00061 | 307044 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g00061 | 291 | Pfam | Myb/SANT-like DNA-binding domain | 46 | 130 | IPR044822 | - | |
Cma14g00061 | 291 | PANTHER | TRANSCRIPTION FACTOR MYB FAMILY-RELATED | 1 | 288 | - | - | |
Cma14g00061 | 291 | ProSiteProfiles | Myb-like domain profile. | 47 | 103 | IPR001005 | - | |
Cma14g00061 | 291 | PANTHER | - | 1 | 288 | - | - | |
Cma14g00061 | 291 | Gene3D | - | 47 | 108 | - | - | |
Cma14g00061 | 291 | MobiDBLite | consensus disorder prediction | 142 | 200 | - | - | |
Cma14g00061 | 291 | CDD | GT1 | 45 | 110 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g00346 | Cma14g00061 | CCT | |
Cma06g00225 | Cma14g00061 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g00068 | Cma-Chr5:288554 | Cma14g00061 | Cma-Chr14:265014 | 5.05E-13 | dispersed | |
Cma14g00061 | Cma-Chr14:265014 | Cma04g01418 | Cma-Chr4:7250979 | 2.46E-14 | dispersed | |
Cma04g00583 | Cma-Chr4:2963403 | Cma14g00061 | Cma-Chr14:265014 | 3.94E-43 | transposed | |
Cma14g00061 | Cma-Chr14:265014 | Cma03g00346 | Cma-Chr3:4145982 | 1.44E-50 | wgd | |
Cma14g00061 | Cma-Chr14:265014 | Cma06g00225 | Cma-Chr6:1153663 | 7.41E-112 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
36161 | PF13837 | Myb_DNA-bind_4 | 2.80E-17 | CL0123 | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g00061 | - | - | csv:101211490 | 374.015 |