Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma14g00064 | ATGGGCGTTAATTACTACAAAATTCTTCAGGTTGATCGCAATGCCAATGACGATGACTTGAAGAAAGCGTACAGAATGCTCGCCATGAAGTGGCATCCAGATAAGAACCCTAACAACAAAAGGGACGCCGAAGCCAAATTCAAGAACATTTCGGAGGCTTATGATGTTTTGAGTGATCCTCAAAGACGAGTTGTGTATGATCAGTTAGGAGAGGAGTATTTGAAGGGGCAAACGCCATTGCCAAATGGTTCTTGCAGTAGCTATACTAGCCATGGTTCGTCGACTAAGTTTTGCCGTAACTCGAGAAGTGCCAATGATTTATTTTCGGAATTGTTCGGTTTTCCGAGCCCCTTTGAAGGGATGAGCCACATGAGTGACCCTCGTGCTGCTGCTTATGGATTTCCAAGGGGTTTGTTTGGTGATAATGTATCTGCTTCCCTAAGACCTGGGGCTGGTGGGGCCTCTAGTTATACGAGGAAAGGTGCTGCAATAGAGAGAACTCTGCTGTGTAGTTTAGAAGATCTCTTCATGGGCTGTGTGAAGAAGATGAAGATTGCTAAGGATGCCTTGGATAATATGGGGAGACCTACTACAGTGGAGAAAATCTTGACAGTAGACATCAAGCCTGGATGGAAGAAGGGAACTAAAATTACCTTTCCAGAATTAGGAGATCAGCAACCAAGAGGTATACCCTCGGACCTTGTTCTTACCCTTGATGAGATACCTCATAGAGTTTTCAAAAGGGATGGCAACGATCTTATTACCACCCAAGATATCTCTCTGGTTGAAGCTCTAACAGGGTACACTGTGCATCTAACAACTCTTGATGGACGGAATCTAACGATTCCAATCGATTCAATCGTTGGGCCGACTTATGAAGAAGTCGTGATCGGAGAAGGAATGCCAATTCCCAAGGAAGCTTCGAGGCATGGGAATTTGAGAATCAAGTTCAACGTGAAGTTCCCGGGCGGGCTCTTACAAGATCTCCATTCCGCCATGGAAATGCCCTCCACCACTCCCAAAACCGTCGAGGAAATTTTCAAAGACTATAGCGGTCGCCGCGCCGCTCTTGTTCGAGCCCTCGCTCACGATGTGGATGAATTCTACGGCCTCTGTGATCCAGATAAGGAAAATTTGTGCCTTTATGGACATCCCAATGAAACATGGGAAGTGGTTCTTCCAGTAGAAGAGGTTCCACCGGAGCTTCCTGAGCCTGCACTTGGAATTAATTTTGCTAGGGATGGCATGAACAGAAAAGATTGGTTATCTCTAGTTGCTGTACATAGTGATTCCTGGTTGCTTTCTGTGGCTTTCTATCTTGGAGCAAGGCTTAACCGAAACGAAAGAAAGCGTTTGTTTAGCTTGATGAACGATCTTCCCACTGTCTTTGAAGTTGTGACAGAACGGAAGCCTGTCAAAGAGAAGCCTAGTGTAGATAGTGGAAGCAGATCACAAGGAAGCGCGAAGAGATCCAATGATGGGCAAGTGAAAAGCAATCCTAAACTTGCTGAACAGAGTTATGAGGAGGATGTCGATGAACATAGCGAAACCCTCTGCGGTAGCTGTGGTGAAAATTACAGTGCAGACGAGTTCTGGATTGGCTGTGACATCTGCGAAAGAAACCATCAAAACGACCGGCTGATTTCAGCGAGCTGTTCAGAAGTCATCTTGGCTCCACCAGCAGCAGCAGCAGCAGCTTCAGGACATTGCCCTTCCCCAGCTACAGCTCATCACCCACCTATCTTTTCGATAAAAAGTGGTCGGTTTTTAAAGAAAGGGCTTCACGACAATAAACTATAA | 1800 | 45.83 | MGVNYYKILQVDRNANDDDLKKAYRMLAMKWHPDKNPNNKRDAEAKFKNISEAYDVLSDPQRRVVYDQLGEEYLKGQTPLPNGSCSSYTSHGSSTKFCRNSRSANDLFSELFGFPSPFEGMSHMSDPRAAAYGFPRGLFGDNVSASLRPGAGGASSYTRKGAAIERTLLCSLEDLFMGCVKKMKIAKDALDNMGRPTTVEKILTVDIKPGWKKGTKITFPELGDQQPRGIPSDLVLTLDEIPHRVFKRDGNDLITTQDISLVEALTGYTVHLTTLDGRNLTIPIDSIVGPTYEEVVIGEGMPIPKEASRHGNLRIKFNVKFPGGLLQDLHSAMEMPSTTPKTVEEIFKDYSGRRAALVRALAHDVDEFYGLCDPDKENLCLYGHPNETWEVVLPVEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSLMNDLPTVFEVVTERKPVKEKPSVDSGSRSQGSAKRSNDGQVKSNPKLAEQSYEEDVDEHSETLCGSCGENYSADEFWIGCDICERNHQNDRLISASCSEVILAPPAAAAAASGHCPSPATAHHPPIFSIKSGRFLKKGLHDNKL | 599 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 282796 | 288891 | - | CmaCh14G000640.1 | Cma14g00064 | 307047 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma14g00064 | 599 | Pfam | DnaJ domain | 4 | 67 | IPR001623 | - | |
| Cma14g00064 | 599 | ProSiteProfiles | dnaJ domain profile. | 4 | 70 | IPR001623 | - | |
| Cma14g00064 | 599 | CDD | DnaJ | 4 | 59 | IPR001623 | - | |
| Cma14g00064 | 599 | Gene3D | DnaJ domain | 3 | 121 | IPR036869 | - | |
| Cma14g00064 | 599 | Pfam | DnaJ C terminal domain | 164 | 322 | IPR002939 | - | |
| Cma14g00064 | 599 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 331 | - | - | |
| Cma14g00064 | 599 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
| Cma14g00064 | 599 | PRINTS | DnaJ domain signature | 62 | 81 | IPR001623 | - | |
| Cma14g00064 | 599 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
| Cma14g00064 | 599 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
| Cma14g00064 | 599 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 245 | 323 | IPR008971 | GO:0006457|GO:0051082 | |
| Cma14g00064 | 599 | CDD | DnaJ_C | 164 | 322 | - | - | |
| Cma14g00064 | 599 | MobiDBLite | consensus disorder prediction | 478 | 502 | - | - | |
| Cma14g00064 | 599 | SMART | dnaj_3 | 3 | 62 | IPR001623 | - | |
| Cma14g00064 | 599 | SUPERFAMILY | Chaperone J-domain | 3 | 85 | IPR036869 | - | |
| Cma14g00064 | 599 | Gene3D | - | 243 | 322 | - | - | |
| Cma14g00064 | 599 | PANTHER | DNAJ HEAT SHOCK FAMILY PROTEIN | 1 | 331 | - | - | |
| Cma14g00064 | 599 | ProSitePatterns | Nt-dnaJ domain signature. | 47 | 66 | IPR018253 | - | |
| Cma14g00064 | 599 | Pfam | Alfin | 342 | 467 | IPR021998 | GO:0006355|GO:0042393 | |
| Cma14g00064 | 599 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 165 | 243 | IPR008971 | GO:0006457|GO:0051082 | |
| Cma14g00064 | 599 | MobiDBLite | consensus disorder prediction | 471 | 509 | - | - | |
| Cma14g00064 | 599 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 509 | 542 | IPR013083 | - | |
| Cma14g00064 | 599 | Gene3D | - | 162 | 241 | - | - | |
| Cma14g00064 | 599 | SUPERFAMILY | FYVE/PHD zinc finger | 507 | 540 | IPR011011 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cma06g00227 | Cma14g00064 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma11g01797 | Cma-Chr11:12024893 | Cma14g00064 | Cma-Chr14:282796 | 1.45E-139 | dispersed | |
| Cma14g00064 | Cma-Chr14:282796 | Cma19g00893 | Cma-Chr19:8166506 | 1.04E-134 | dispersed | |
| Cma14g00064 | Cma-Chr14:282796 | Cma04g00152 | Cma-Chr4:750004 | 4.79E-109 | wgd | |
| Cma14g00064 | Cma-Chr14:282796 | Cma04g01114 | Cma-Chr4:5756167 | 8.51E-113 | wgd | |
| Cma14g00064 | Cma-Chr14:282796 | Cma06g00227 | Cma-Chr6:1163652 | 3.53E-127 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma14g00064 | K09510 | - | csv:101212210 | 495.738 |