Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00069 ATGACTTCCTGTTGCTTTGCAATCCTGAATTGCTGTAAAGGAAATAGCAGCTCAGAGGAACCGGCAGAAGGGATTGCTGTTAACAACAATGTACGCATCTTTTCTTATAATTCACTGAGGTCAGCCACTAGTAATTTTCATCCATCAAGCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTGAGGGATGGTACCAATGTTGCAGTAAAATCACTGTCTGCAGAATCTTCTCAGGGAACTCGTGAATTTTTAACCGAGATAAATATGATATCAGATATAAGACATCAAAATCTCGTTGAACTGATCGGTTGTTGCGTCGAAGGCACGCATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAATACTTTGCTTGGTACATTGAGTAAGCATGTCGTTCTGGATTGGCCAATGAGAGCTAAGATTTGTCTCGGTACAGCTTTGGGTCTTGCATTTCTACACGAGGAAGCTGAACCGTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTCGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCGGACAACGTTACTCATGTTAGTACTCGAGTGGCCGGAACTGTTGGATATTTGGCTCCCGAGTATGCACTCTTGGGACAGTTGACAAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAGTAATTAGTGGAAGTAGCAGCACCAAAGCAGCATTTGGAGAAGAGTTGTTGATTCTCGTAGAATGGACTTGGAAATTAAAACAAGAAGGACGGCTCGTAGAACTCATTGATCCGGAACTGATCAATTATCCAAAGGCCGAGGTGGTGCGTTTCATCACGGTTGCACTCTTCTGTACCCAAGCAGCAGCAAATCAAAGGCCAACCATGAAGCAGGTCGTGGAAATGCTTTCAAGAGAGGTACACCTTAACGAAAACCTGCTGACAGAGCCTGGAGTATACAAAGGACACAAAACTAGGAAGTTAAATGGTGGTGGTGGTGGTGCTGCTATTTCTGGGGGATCATCCTCCTCCCATGGAATCAAATATAAAAAAGCTATGAAGACTTCTCCATCTTCATCTCAATTTAACAGCTCAAACAGTCTGACTCAAATGCTTCCTAGGTGA 1164 43.04 MTSCCFAILNCCKGNSSSEEPAEGIAVNNNVRIFSYNSLRSATSNFHPSSRIGAGGYGVVYKGVLRDGTNVAVKSLSAESSQGTREFLTEINMISDIRHQNLVELIGCCVEGTHRILVYEYLENNSLANTLLGTLSKHVVLDWPMRAKICLGTALGLAFLHEEAEPSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVISGSSSTKAAFGEELLILVEWTWKLKQEGRLVELIDPELINYPKAEVVRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNENLLTEPGVYKGHKTRKLNGGGGGAAISGGSSSSHGIKYKKAMKTSPSSSQFNSSNSLTQMLPR 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 314460 318350 + CmaCh14G000690.1 Cma14g00069 307052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00069 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Cma14g00069 387 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Cma14g00069 387 SUPERFAMILY Protein kinase-like (PK-like) 26 316 IPR011009 -
Cma14g00069 387 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 381 - -
Cma14g00069 387 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Cma14g00069 387 MobiDBLite consensus disorder prediction 344 387 - -
Cma14g00069 387 Pfam Protein tyrosine and serine/threonine kinase 50 316 IPR001245 GO:0004672|GO:0006468
Cma14g00069 387 MobiDBLite consensus disorder prediction 349 387 - -
Cma14g00069 387 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 381 - -
Cma14g00069 387 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Cma14g00069 387 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00069 387 SMART serkin_6 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00069 Cma-Chr14:314460 Cma18g00359 Cma-Chr18:1947657 3.79E-146 dispersed
Cma14g00069 Cma-Chr14:314460 Cma04g00629 Cma-Chr4:3229856 2.65E-116 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69045 PF07714 PK_Tyr_Ser-Thr 4.70E-46 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00069 - - csv:101218048 666.381