Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00086 ATGAATCCCTCCACCCACGAGCAACCAGCACCTCCTCCTCCTTTGCCGCCGTTGCCCCACCGCCCTTCCGCCGCCTGTCCTCGTCACCCACAAGAGCAGTTTACTGCTTTCTGCCCTTTATGTCTCTGTGAGCGTCTCTCTCTTCTCGATTCCTCTTCTACTACTTCTTCTTCTTCCTCTACCCGGAAACCCCATTCCACTGCTGCCTCTGCTCTTAAGGCTATTTTCAGGCCTGCTCCTCCAAATCGACCCTCTTCTTTTTTTCCTGAGCTTCGTCGTACTAAATCCTTTTCTGCCTCTAAGAACGACGCCTTCTCCGCTGTCTTTGAGCCGCAGAGGAAATCTTGCGACGTTCGAGTTCGTAACGCTCACTGCTCTCTCTTTTCCCACGACGCTTCTGCTTCTTCCAACCTTGTCGCTCCTTCTGCTGAAATTACTCCCGAGACTAAGTTTTTGGAGGACTCCAGTTCCTCCTGCCTTGAACATCAACCCCTCGGCCACCGAGAAATTAGGGTTTCGGAACAACCCAATGTGGTGGATGTTGTGATCGAAAACGGAGCTCAGGAGATCGTTGAAGAAAAAGAAATTCAGGTTGAAGTAGGGCCAGAAACGGTGCAACTACAGGAGGAATTCAAAACCATGAAGGATCATATAGATCTCGATTCACACACGAAGAAGCCATCCGGAAGGGGGAGCTTCTGGTCGGCGGCTTCCGTTTTCAGCAAGAAGCTGCAGAAATGGAGGGATAAACAGAAGGAAAAGAAGCAGAGAAACGGCGGTGGATCTACGGCATTGCCAGTGGAGAAGCCAATCGGACGCCATTTCCGAGATACCCAGTCGGAAATTGCTGATTACGGCTACGGCCGACGATCCTGCGATATTGATCCGAGATTCTCTCTCGATGCCGGCCGAATGTCCTTCGACGATCCTCGCTATTCGTTCGACGAACCGAGGGCTTCTTGGGACGGGTATTTGATTAGCCGAACGTTCCCAAGAATGCCCACTATGCTTTCCGTCGTTGAGGATGCCCCTATCAACGTCTTCCGTACCGATGCACAAATTCCCGTCGAAGACTCCATAAATTCAACCAATGAGGAAGAAAATATCCCCGGCGGGTCTTCGCAGACCCGGGATTACTATTCAGACTCTTCTTCCCGTCGACGGAAGAGCCTCGACCGGTCCAACTCCATCAGAAAGACCGCCGCAGCGGTGGTGGCTGAGATTGATGAGATGAAGTCGTCTGTTTCGAACGCCAAAGTTTCTCCTGCAACTACAGATGTGTGCCATGGCCCGAAACTAGCCATCCCAGATAGAGATTCCAACTCCAGTTCCCTGCAAGAGGACTGCTCTAAGTCCTTGGATTCGGCATTTAATGATGTTGCGTCGGTGGTTGGGACGGGGAACCGGAAAGAGGAGTCAAAAAAGTCCAGAGGGTGGGGGAAAGGTTGGAGAATCTGGGGATTGATTAACCGGCGGGGAGGAAACAAAGATGAGGAGGAAGACAAAGAGAGTAGTAGACCCAATGGCATGGAGCGGTCGAATTCAGGGTCATGGCCGGAGCTGCGCGGCGAGCGGAATAGTGATATCAAAGGAGGGTTCAATCCCAAAATGTTTAGGAGTAACAGCAGTGTAAGTTGGAGGAGTTCAAGTATGATGGGTGGATCTTTCAGTAGTTCAAGGAAAAGCAATACAGAGACTAATGGGAATGGGAAAAAGAAGAACGAGGAGCCAGTCTTGGAAAGGAGCCGTAGTGCTCGACATTCTCCGACGAACATCGACAATGGACTTCTCCGGTTCTACTTGACGTCGTTGAGGGGCAGCAGGCGAGGTGGGTCGGGAAAGGTGAAACCAAATCAAGCACAGTCCATTGCTAGAAGTGTTCTTCGACTGTATTAA 1896 51.11 MNPSTHEQPAPPPPLPPLPHRPSAACPRHPQEQFTAFCPLCLCERLSLLDSSSTTSSSSSTRKPHSTAASALKAIFRPAPPNRPSSFFPELRRTKSFSASKNDAFSAVFEPQRKSCDVRVRNAHCSLFSHDASASSNLVAPSAEITPETKFLEDSSSSCLEHQPLGHREIRVSEQPNVVDVVIENGAQEIVEEKEIQVEVGPETVQLQEEFKTMKDHIDLDSHTKKPSGRGSFWSAASVFSKKLQKWRDKQKEKKQRNGGGSTALPVEKPIGRHFRDTQSEIADYGYGRRSCDIDPRFSLDAGRMSFDDPRYSFDEPRASWDGYLISRTFPRMPTMLSVVEDAPINVFRTDAQIPVEDSINSTNEEENIPGGSSQTRDYYSDSSSRRRKSLDRSNSIRKTAAAVVAEIDEMKSSVSNAKVSPATTDVCHGPKLAIPDRDSNSSSLQEDCSKSLDSAFNDVASVVGTGNRKEESKKSRGWGKGWRIWGLINRRGGNKDEEEDKESSRPNGMERSNSGSWPELRGERNSDIKGGFNPKMFRSNSSVSWRSSSMMGGSFSSSRKSNTETNGNGKKKNEEPVLERSRSARHSPTNIDNGLLRFYLTSLRGSRRGGSGKVKPNQAQSIARSVLRLY 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 394474 396369 - CmaCh14G000860.1 Cma14g00086 307069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00086 631 MobiDBLite consensus disorder prediction 493 592 - -
Cma14g00086 631 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 631 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 356 396 - -
Cma14g00086 631 Pfam Protein of unknown function (DUF740) 13 609 IPR008004 -
Cma14g00086 631 MobiDBLite consensus disorder prediction 247 268 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 1 24 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 356 380 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 381 395 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 1 27 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 566 587 - -
Cma14g00086 631 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 631 IPR008004 -
Cma14g00086 631 MobiDBLite consensus disorder prediction 536 565 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 493 508 - -
Cma14g00086 631 MobiDBLite consensus disorder prediction 421 448 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00372 Cma14g00086 CCT
Cma07g01046 Cma14g00086 CCT
Cma06g00248 Cma14g00086 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00086 Cma-Chr14:394474 Cma20g00366 Cma-Chr20:1768788 1.95E-99 dispersed
Cma14g00086 Cma-Chr14:394474 Cma03g00372 Cma-Chr3:4287670 0 wgd
Cma14g00086 Cma-Chr14:394474 Cma06g00248 Cma-Chr6:1240207 0 wgd
Cma14g00086 Cma-Chr14:394474 Cma07g01046 Cma-Chr7:5522385 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00086 - - csv:101216300 963.37