Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00124 ATGGCCCAACTCTGTTTTCTCTGTTTCTTCTTCTTCTTCTTCCTCTTCTTCGCCGGCCCTGCCGCATCTCAGCAGCTCTACTTCGCCGGATTCCACGACTCCGCCGCCGTCGCTGCCAACTTAACCCTCACTGACATCGCCAAGATCGAGCAGAACGGAATCTTAAAGCTCACGAACGACACCAGTCGATTACAGGGCCATGCCTTCTACAGCTCCCCTGTTCGCTTCAAAAACTCCTCCGACGGCAAAGCTTTTTCGTTCTCCACCGCTTTCGCCATCGCCGTCGTCCCCGAGTACCCGACCCTCGGCGGCCATGGCCTCGCCTTCACCATTGCGCAGTCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTGGGCCTTCTCAATGCGACTGACGTTGGAAACTTCTCGAACCATCTCTTCGCCGTGGAGTTTGACACCGTTCAAGATTTCGAGTTCGGCGACATCAACGACAACCACGTCGGAATCAATCTCAACAATATGGTCTCTAATGCCTCCACCACCGCTTCCTATTTCGTTGATGATGGACCCACCAAGCAAAACCTGACCCTAAAAAGTGGGAGGCCGATTCAAGCTTGGATCGATTACAATTCCGCTGTAAATTCCCTGACGGTGGCGCTTTCTCCGTTCTCCAATAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTCACGAGTTTATGTATGTTGGGTTCTCCGCCTCGACTGGGCTTCTTGCAAGCTCTCACTTTGTGTTGGGATGGAGTTTCAGTATGAATGGACCAGCCCAATCCCTGGATCTTTCTTCTTTGCCTTCTGTTCCTGGTCCGAAGAAGAAGCACACTGCCTTTACAATTGGGGTTTCTGTTGGGGCCGTTTTGATTGTAGCAATTGCTATTGGCGTTGCTGTTTTTATCACATGGAAGATAAAAAACGCGGACATAATCGAGGCCTGGGAGCTTGAAATCGGCCCTCATCGGTACTCTTACAAGGAGCTCAAGCAGGCGACTAAACGATTTAGGGACAAAGAGCTTCTAGGGCGCGGTGGGTTTGGGAAAGTTTATAAAGGGACTTTGCGGAAATCGAAAACCGTAGTGGCTGTGAAGCGAATCTCTCATGAATCGAAACAGGGCCTGAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGACACCGGAACTTGGTTCAGTTGCTGGGATGGTGTCGCCGCCGTGGGGATCTGCTTCTGGTTTATGAATTTATGGCTAATGGGAGCTTGGATAGCTACATTTTCGACGAGCCGGAAGCGGTTCTGAGTTGGGAACAGAGATTCAGAATCATTAAGGGCGTCGCCTCTGGTTTGCTGTACTTGCACGAAGGCTACGAGCAGGTGGTGATTCATAGAGATGTGAAGGCCAGTAATGTCCTTCTCGACAGCGAGATGAATGGAAAGCTCGGCGATTTCGGCCTGGCTCGGCTATACGAACACGGGGCGAACCCGAGCACGACTCGGGTGGTGGGAACTCTGGGATATCTGGCGCCGGAGCTACACAGAACAGGGAAAGCCACGACTAGCTCAGATGTGTACGCCTTCGGCGCACTTGTGCTGGAAGTGGCCTGCGGACGTCGACCGATCGACCCAAAATCTCGGTCGGAGGAGCTGGTACTGGTGGATTGGGTGTGGGAGAATTACAGGGAAGGGAGATTAATGGAAGTAATGGATCCAAAACTGAAAGGGGATTACAATGCGGTGGAGGCAGTGATGATATTGAAATTGGGGTTGTTCTGTTCGAACGATTCGGCGGCGGGGCGGCCGAGTATGAGGCAGGTGGTGCGGTATTTGGAGGGGGAGAATGGAGTGCCGGAGGAGATATCGGCACCGAAAGTGGTGGAGGGAGGGAAGAACGGGGAAGGGTTCGATGATTTTGTGAATTCGTTTGCTTCAACATGCTCGTATTCGCGTACCGGAAATGATAATAATAATATGGATACGGATATGAGTTTCGCTTCATTTTCCACTTCTCCTCTTTCGCTTCTCAATGGCAGAGACTGA 2055 51.53 MAQLCFLCFFFFFFLFFAGPAASQQLYFAGFHDSAAVAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKAFSFSTAFAIAVVPEYPTLGGHGLAFTIAQSKNLRGLPSQYLGLLNATDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPTKQNLTLKSGRPIQAWIDYNSAVNSLTVALSPFSNKPKKPILSFNVDLSPILHEFMYVGFSASTGLLASSHFVLGWSFSMNGPAQSLDLSSLPSVPGPKKKHTAFTIGVSVGAVLIVAIAIGVAVFITWKIKNADIIEAWELEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLRKSKTVVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYEFMANGSLDSYIFDEPEAVLSWEQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDSEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELHRTGKATTSSDVYAFGALVLEVACGRRPIDPKSRSEELVLVDWVWENYREGRLMEVMDPKLKGDYNAVEAVMILKLGLFCSNDSAAGRPSMRQVVRYLEGENGVPEEISAPKVVEGGKNGEGFDDFVNSFASTCSYSRTGNDNNNMDTDMSFASFSTSPLSLLNGRD 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 532341 534694 + CmaCh14G001240.1 Cma14g00124 307107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00124 684 ProSiteProfiles Protein kinase domain profile. 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00124 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Cma14g00124 684 Gene3D Transferase(Phosphotransferase) domain 1 422 630 - -
Cma14g00124 684 Pfam Legume lectin domain 25 276 IPR001220 GO:0030246
Cma14g00124 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 672 - -
Cma14g00124 684 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Cma14g00124 684 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Cma14g00124 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 284 IPR013320 -
Cma14g00124 684 SUPERFAMILY Protein kinase-like (PK-like) 327 630 IPR011009 -
Cma14g00124 684 SMART serkin_6 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00124 684 Pfam Protein kinase domain 346 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00124 684 Gene3D - 25 274 - -
Cma14g00124 684 CDD lectin_legume_LecRK_Arcelin_ConA 28 266 IPR001220 GO:0030246
Cma14g00124 684 CDD STKc_IRAK 351 617 - -
Cma14g00124 684 PANTHER - 8 672 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00642 Cma-Chr13:6083816 Cma14g00124 Cma-Chr14:532341 2.52E-167 dispersed
Cma14g00124 Cma-Chr14:532341 Cma18g00370 Cma-Chr18:2011296 1.66E-162 dispersed
Cma19g00989 Cma-Chr19:8609121 Cma14g00124 Cma-Chr14:532341 2.52E-152 dispersed
Cma14g00124 Cma-Chr14:532341 Cma14g00127 Cma-Chr14:535702 0 proximal
Cma14g00124 Cma-Chr14:532341 Cma03g00415 Cma-Chr3:4475133 0 wgd
Cma14g00124 Cma-Chr14:532341 Cma06g00283 Cma-Chr6:1371766 3.20E-49 wgd
Cma14g00124 Cma-Chr14:532341 Cma07g01005 Cma-Chr7:5205608 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69049 PF00069 Pkinase 1.90E-47 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00124 - - csv:101223168 1176.0