Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00127 ATGTTTTTCAAGCTCTCAATTGTGGTGTGCCTGATTGTGGCCTCAGTAGTCTCAGCTGCTTCTGAAGGTCCTAATTTCATCTTCAATGGTTTCCAATCTGCAAATCTATCACTCGATGGTGTGGCTGTTGTTACCCCAAATGGCCTCCTGCAACTGACCAACGAGACCAGGCAAAGAATTGGCCATGGGTTTTATACTAATCCTGTAAATTTTGTCAATTCCTCTTATGGCGTTTCATCCTTCTCAACCACTTTCGTCTTTGCCATTATATCTGAATACCCAAATCTAAGCGGCCATGGAATTGCCTTTGTGGTGGCTCCGACGAGAACTTTTCCCGGAGCTCAGCCAAGTCAGCATCTTGGCCTTTTCAATGACGGCAACAACGATATCGATACGAATCACGTTGGCATAGATATAAATGGGCTGACCTCTGAGAGAGCTGCAACTGCTGGATTTTATCCCGAGAACAATGGGACTTTAAGAAATTTGACTCTTATAAGTGGCCAACCAATGCAGGTTTGGGTCGAATACGATGGTATCCACAAAGAAATCAACGTCACTTTGGCGCCAATCGACATACCCAAACCCCAAATTCCACTCTTGTCTTACTCTCGTGACCTTTCATCTGTCATAAACAACAGCTCCATGTTCGTCGGGTTTTCATCCTCCACTGGCTCGGTTTCAACTTCTCATTATGTTTTAGGATGGAGTTTCAGATTAAACGGGCAGGCTCGAAGACTTGACATTTCCCACCTGCCAAAGCTACCTCGGAAAAAACAAACATCCAAGTTTTTAACAATTGGGTTGCCTTTAATTTCTGGAGGGATTATTTTGCTGGTGATTTTAGGCATTGTTCATGTTGTCAGAAGGAAGAGGAAGTTCGCCGAGTTGCTCGAGGACTGGGAGCTTGATTATGGGCCTCACAGGTTCAAATACAAAGACTTGTACGTGGCTACAAATGGATTTAAAGAGAAAGAGGTTCTGGGTTCTGGCGGATTTGGACGAGTCTACAAAGGGGTATTACCAAAATCAAAACTTGAAATCGCTGTCAAGAGGATTGCTCATGAATCAAGGCAGGGAATGAAAGAATTTGTGGCTGAGATCGTTAGTCTTGGGAGGCTTCGACACAGGAACCTTGTACAGCTTTTAGGCTACTGCAGACGAAAAGGAGAGCTGCTTTTAGTATATGATTACATGCAGAATGGAAGTTTAGATAAGTGCCTGTTTGGCGAAACAAATCCTATTCTGATTTGGAGCCAGAGGTTTCGAATCATCAAAGGGGTGGCCTCGGGGCTGCTTTACCTTCATGAAGAATGGGAGCAAGTTGTGATTCACAGAGATGTCAAAGCCAGTAATGTCTTGCTAGACAGTGAGTTAAACGGAAGATTGGGAGATTTTGGGTTGGCGAGACTGTATGACCATGGAACAGACCCTCAAACAACACACATAGTGGGAACGCTCGGTTATTTGGCTCCAGAACACATCAGATCCGGCAGGCCGACGACCCACATGGATGTGTATGCTTTTGGGGCATTTCTGCTGGAGGTTGCAACAGGAAAGAGGCCAATAGAGATTCGGGGAATGACAGAAGATGGAATACTGCTGGATTGGGTATTTTTATGTTGGGCGAGAGGAGCCATTGTCGACGCCAAGGATCCAAAATTGGGATCAGATTATGTAGCAGAGGAAATGGAAATGGTGCTGAAACTTGGATTGTTGTGTTCTCAAACCAACCCAATGGCGAGGCCAAGCATGCGCCAAATTGTACAGTACTTGGAAGGCGATACTCCCATGCCAGAGATGGTTTCTATAGATACTTCAGGCGGAGGATTTGAAGGTTTTGATGATCTTGCCATGTCCTACTCTTCCTTGGATAAGGCTCCCGCATATTCTACTTCTTCCTTTGTGAAGGGTTTCGCCCATTCTTCCGATGCTCAGACTCTTCTGTCTGGTGGCCGTTGA 1962 45.26 MFFKLSIVVCLIVASVVSAASEGPNFIFNGFQSANLSLDGVAVVTPNGLLQLTNETRQRIGHGFYTNPVNFVNSSYGVSSFSTTFVFAIISEYPNLSGHGIAFVVAPTRTFPGAQPSQHLGLFNDGNNDIDTNHVGIDINGLTSERAATAGFYPENNGTLRNLTLISGQPMQVWVEYDGIHKEINVTLAPIDIPKPQIPLLSYSRDLSSVINNSSMFVGFSSSTGSVSTSHYVLGWSFRLNGQARRLDISHLPKLPRKKQTSKFLTIGLPLISGGIILLVILGIVHVVRRKRKFAELLEDWELDYGPHRFKYKDLYVATNGFKEKEVLGSGGFGRVYKGVLPKSKLEIAVKRIAHESRQGMKEFVAEIVSLGRLRHRNLVQLLGYCRRKGELLLVYDYMQNGSLDKCLFGETNPILIWSQRFRIIKGVASGLLYLHEEWEQVVIHRDVKASNVLLDSELNGRLGDFGLARLYDHGTDPQTTHIVGTLGYLAPEHIRSGRPTTHMDVYAFGAFLLEVATGKRPIEIRGMTEDGILLDWVFLCWARGAIVDAKDPKLGSDYVAEEMEMVLKLGLLCSQTNPMARPSMRQIVQYLEGDTPMPEMVSIDTSGGGFEGFDDLAMSYSSLDKAPAYSTSSFVKGFAHSSDAQTLLSGGR 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 535702 537726 + CmaCh14G001270.1 Cma14g00127 307110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00127 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Cma14g00127 653 Gene3D - 126 263 - -
Cma14g00127 653 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 128 608 - -
Cma14g00127 653 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 6 128 - -
Cma14g00127 653 Pfam Legume lectin domain 25 253 IPR001220 GO:0030246
Cma14g00127 653 CDD lectin_legume_LecRK_Arcelin_ConA 25 242 IPR001220 GO:0030246
Cma14g00127 653 Gene3D Transferase(Phosphotransferase) domain 1 399 601 - -
Cma14g00127 653 ProSiteProfiles Protein kinase domain profile. 322 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00127 653 PANTHER - 128 608 - -
Cma14g00127 653 PANTHER - 6 128 - -
Cma14g00127 653 CDD STKc_IRAK 328 594 - -
Cma14g00127 653 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Cma14g00127 653 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 258 IPR013320 -
Cma14g00127 653 Gene3D Phosphorylase Kinase; domain 1 307 398 - -
Cma14g00127 653 Pfam Protein kinase domain 322 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00127 653 Gene3D - 13 125 - -
Cma14g00127 653 SUPERFAMILY Protein kinase-like (PK-like) 303 600 IPR011009 -
Cma14g00127 653 SMART serkin_6 322 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00415 Cma14g00127 CCT
Cma07g01005 Cma14g00127 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00415 Cma-Chr3:4475133 Cma14g00127 Cma-Chr14:535702 0 dispersed
Cma07g01005 Cma-Chr7:5205608 Cma14g00127 Cma-Chr14:535702 0 dispersed
Cma14g00046 Cma-Chr14:199606 Cma14g00127 Cma-Chr14:535702 0 dispersed
Cma14g00127 Cma-Chr14:535702 Cma06g00283 Cma-Chr6:1371766 7.46E-41 dispersed
Cma14g00124 Cma-Chr14:532341 Cma14g00127 Cma-Chr14:535702 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69050 PF00069 Pkinase 2.20E-47 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00127 - - csv:116402748 1075.46