Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00174 ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCTAGGTATTCGATCTCGTCGCCGTCGAGATCTCCGGCCTTGACTCCTCGGCGGAGCTTCAACGATGCGATGATCGAACAGAGCATCGAATCTGCGGCGGCGTTTGTGATGAAATGGAATCCGGATTCTTCAACTTATGCGAAAGTTACTTCGATGTTTTATGAAGACAGAAACGAAGCCATGCAGTTCATTAAGCGCGTGAATGATCTTCAAAAAGCGATGCATCTGATGGTTTCGGAAGATTCCGGTTTCGCTTCCGATAGGCTTGTTTACGCTCAAGGTTTGATGGAAATCGCAATGAAAAGGCTTCAGAAGGAGTTTTATCAGATTCTCTCCATGAACCGCGCTCATCTCGATCCGGAATCTGTTTCGGCTCGATCCTCCCGCTGCTCCACCAGATCGAGCACTTCCGCTGATTTCGACGATGACGGAACCCTAGACGATGAAGTCCAAGTCGTAGGCGATTCGATCGCTGAAGTTGAGCAAGTTTCTTCCATCGTTATGGAGGATTTACGAACCATAGCTGAGTGCATGATCTCATCGGGATACGCTAAAGAGTGCGTTAATATGTATAAAGTGATTCGAAAATCGATTATCGATGAAGGTGTGTACCGCCTCGGTCTTGAGAAATTGAGCCCTTCGCGAATCAACAAGATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATTAAACTAGCAATTAGAACGCTGTTCGTCGGCGAACGAATTCTCTGCGACAACGTTTTTTCCTCGTCTGAATCGATTAGAGAATCCTGTTTTGCTGATATATCCAGAGAAGGCGCTCTGCTTCTGTTTGGATTCCCTGAACTTGTAGCTAAGAGTAAAAAATCTCCGGAAAAAATGTTCCGTGTTCTTGATATGTACTCATCAATCGCCGAAAATTGGCCGGAGATCGAATCGATTTTCTCGTCTGAGTCCTCATCTGTAGTTCGATCTCAAGTTCTGACCTCACTCGCGAAGCTTGGCGAGTTAGTCCGTGCCATAGTAATGGATCTCGAATTCTCAATTCAGAAAAATTCATCCAAATCGCCGGTCGCTGGCGGAGGTGTTCATTCTTTAACGCTTCTCTCAATGAACTACCTCACTTTCCTCGCCGATTACGGCAACGTTTTGACGGATATTTTCGCCGATTGGATTCCGCAAGACAAGTCCTCTCTGGAACAAATTTTCTTTGGCAGTTCAGACTCCGACGACTCTCCAACGGCTTCTGCAATCTCTTTGCGAATGGGATGGTTAATTCTAGTCCTACTCTGCAAACTCGACAGCAAAGCGAAACGATACAAAGACGTTTCACTCTCGTATCTATTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCATTATCTTCTCGGCGACGAGTGGATCGCGAAGCACGAGGCCAAAGTAAGGCAATTTGCAGCCAAATACGAGGCATTGGCTTGGGGCAGAGTCTTTGATTCCTTGCCGGAGAATCCAACCGAGAAATTTTCACAAGAGGAAGTCAAAGAAATCTTCAGGAACTTCAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCCTGCTTCATTCCTGATCCAAAGCTTCGAGACGAAGTTAAACTATCAATCGGTAGGAAGCTCGTTTCGTTCTATGGAGAATTTTACAGAGCGCAGAAAGCTTACGCCGGTGCTATTGAAAAGCCGTACATCAGATTCTCCCCGGAAGATATCGGTAACTACCTTTCAGATCTTTATTTTGAACCGTCAGATTGGGCGAGCGTTTCCACTTCGTCGCCGTCGTCCACCTCCTCCTCTCACCGGCGGGAACCGGGGGCCCGTTAA 1920 46.41 MPRKGMRSLLFQFSSPSNSISRYSISSPSRSPALTPRRSFNDAMIEQSIESAAAFVMKWNPDSSTYAKVTSMFYEDRNEAMQFIKRVNDLQKAMHLMVSEDSGFASDRLVYAQGLMEIAMKRLQKEFYQILSMNRAHLDPESVSARSSRCSTRSSTSADFDDDGTLDDEVQVVGDSIAEVEQVSSIVMEDLRTIAECMISSGYAKECVNMYKVIRKSIIDEGVYRLGLEKLSPSRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDNVFSSSESIRESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSIAENWPEIESIFSSESSSVVRSQVLTSLAKLGELVRAIVMDLEFSIQKNSSKSPVAGGGVHSLTLLSMNYLTFLADYGNVLTDIFADWIPQDKSSLEQIFFGSSDSDDSPTASAISLRMGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLHYLLGDEWIAKHEAKVRQFAAKYEALAWGRVFDSLPENPTEKFSQEEVKEIFRNFNMAFQETHRKQKSCFIPDPKLRDEVKLSIGRKLVSFYGEFYRAQKAYAGAIEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRREPGAR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 721043 722962 + CmaCh14G001740.1 Cma14g00174 307157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00174 639 Pfam Exo70 exocyst complex subunit 249 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma14g00174 639 MobiDBLite consensus disorder prediction 617 639 - -
Cma14g00174 639 MobiDBLite consensus disorder prediction 144 159 - -
Cma14g00174 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 622 IPR004140 GO:0000145|GO:0006887
Cma14g00174 639 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 622 - -
Cma14g00174 639 Gene3D Exocyst complex component Exo70 64 617 - -
Cma14g00174 639 SUPERFAMILY Cullin repeat-like 76 611 IPR016159 -
Cma14g00174 639 MobiDBLite consensus disorder prediction 142 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00174 Cma-Chr14:721043 Cma14g01199 Cma-Chr14:9583679 2.12E-94 dispersed
Cma13g00158 Cma-Chr13:1194052 Cma14g00174 Cma-Chr14:721043 0 wgd
Cma14g00174 Cma-Chr14:721043 Cma02g00839 Cma-Chr2:4890955 0 wgd
Cma14g00174 Cma-Chr14:721043 Cma20g00434 Cma-Chr20:2052399 0 wgd
Cma14g00174 Cma-Chr14:721043 Cma04g00244 Cma-Chr4:1187698 0 wgd
Cma14g00174 Cma-Chr14:721043 Cma04g01215 Cma-Chr4:6195824 1.14E-175 wgd
Cma14g00174 Cma-Chr14:721043 Cma07g00959 Cma-Chr7:4628775 1.30E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00174 K07195 - csv:101208543 1072.0