Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00181 ATGGTTAAACCATGCTGGAAGCCTCACGATGATGGTGATTCAAACGGACGAGTTGACGGGCTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGCCAATTCTCCATGGCAGTAATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCTTTGAGTATGACCAACCCAGGTACGCAGGGGACCTTTGTCGGAGTTTATGACGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAACGACAATCTCTTCAGCAATCTCAAAAGATATGTATCTTTGCACCAAAACATATCTGAAAACGTTATCAGGAAGACATTTGCAGCAACAGAAGAGGAGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCCAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTTTATATTGCCAACGCAGGCGATTCTCGAGCAGTGCTTGGGAGAACCGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAATCAGTGAGAGATGAACTACGGATGGTTCATCCAGAAGATCCTCAGATTGTGATCCTAAAGCACAATGTGTGGCGTGTTAAAGGTATCATACAGATTTCAAGATCCATAGGTGATGCATATTTAAAAAAGGCAAAGTTCAACAGACCTCCTCTGCCACCAAAATTTCAACTGCCTGAGCCATTTTACAAACCAATCCTCAGTGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCTCGAAATGGAATAGCAAGGAGACTTATCAAGGCTGCACTTCGAGAAGCAGCTAAAAAAAGAGAAATGAGATATTCCGACCTGAAAAAGATAGATAGAGGTGTGCGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCAGTTGATCAATGGCAGGCCCTCCCCTTGTTCCTTGTCAATCAGAGGAGGAGAAGGTCTCCCTACGTCAGCAAACTCCTAG 1113 45.01 MVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGTQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYVSLHQNISENVIRKTFAATEEEFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRAVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGIIQISRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLIKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPQLINGRPSPCSLSIRGGEGLPTSANS 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 756985 758723 + CmaCh14G001810.1 Cma14g00181 307164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00181 370 Gene3D - 23 349 IPR036457 -
Cma14g00181 370 CDD PP2Cc 32 342 IPR001932 -
Cma14g00181 370 SMART PP2C_4 12 340 IPR001932 -
Cma14g00181 370 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Cma14g00181 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 342 IPR001932 -
Cma14g00181 370 SUPERFAMILY PP2C-like 32 343 IPR036457 -
Cma14g00181 370 PANTHER PROTEIN PHOSPHATASE 2C 67-RELATED 3 364 - -
Cma14g00181 370 Pfam Protein phosphatase 2C 64 311 IPR001932 -
Cma14g00181 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00181 Cma-Chr14:756985 Cma19g00750 Cma-Chr19:7473265 7.88E-179 dispersed
Cma14g00181 Cma-Chr14:756985 Cma04g00254 Cma-Chr4:1239018 0 wgd
Cma14g00181 Cma-Chr14:756985 Cma04g01230 Cma-Chr4:6275107 4.21E-168 wgd
Cma14g00181 Cma-Chr14:756985 Cma06g00339 Cma-Chr6:1578877 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00181 K01102 - csv:101210750 703.36