Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00225 ATGGCGATCGCGATGGCCAAATCTTTCAATCCCCAATCCCAGATTTACACTTCCCCACGCCCCCCAATCCACTTTCCGACCGACCCCACTATCTCCATTCTTTCGTTTCTCTTTCGAAACTCCTCCTCTTTCCTTCACAGCCTCGCTCTCGCCGACGCGGATTCCGGCGAATCCCTAACTTTCCGTCAGCTTCAAATCCAAGTCTCCAAGTTGGCCCATGCGTTTATCCACCTCGGGATTCGGAAAGGCGATGTGGTTCTCATATTCGCGCCTAATTCCATCCATTTCCCTGTTTGTTTCTTCGCCATTGTTGCCATTGGAGCCATCGCCACCACTTGTAACCCTGCTTACACCTTCGCGGAAATATCAAAGCAAGTCGCGAGCTGCAACCCCAAGCTCGTAATCACCATTCCAGAACTCTGGGACGTAATCGGTAAACTCAACTTGCCTTCTATAATCCTGGGTTCTAAAATTTCTTCGAAATCCTCCCGCCCCAATATCTGGGTTTACTCCGATTTGATTAAAAACTCCGGCGACGTGTCCGATTTGCCTGTGAGTGAAGTGGGGCAGAGCGATGTGGCGGCACTATTGTATTCATCTGGGACGACGGGGATTAACAAGGGAGTGATTCTGACTCATAGAAACTTCATAACGACGTCGTTAATGGTGACCCATGATCAGGACCTTCTTGGTGATCCTAGAAACGTGTTCTTATGCTTCCTCCCAATGTTCCATGTATTTGGTCTCTCTGTAATTCTTTACTCGCAGCTTCAAAGAGGAAACACCGTCGTTTCAATGGCGAAGTTTGAGCTGGAAAAGGCTTTGGGGGTGGTGATGAAGTATAGAATCACTCATCTTTATCTTGTTCCGCCTGTAATTATAGCCATGGCGAAGCAAAGTGTGGTGAAGAGGTATGACTTGTCGTCGTTGAAGCAGATTTTATCTGGGGCGGCGCCTCTTGGGAAGGATGTGATGGAAGAATGTTCTAAGGTTTTACCTCAGACCAAGATCACGCAGGGGTATGGTATGACAGAAACTTGTGGAGTTATTTCAATGGAGAATTTAGGGGTCGAATCTAGACTATCAGGGTCAACTGGATTCCTTGTTTCAGGAATTGAGGCCCAAATTTTGAGTACAGAAACGCAGAAACGTCTTCCACCCGGTGAAACAGGGGAGATATGCGTGCGAGGACCAAATATGATGAAAGGATATTTCAACAATCAGAAAGCCACCAGCCAAACCATAGACGATCAAGGATGGGTTCATACTGGAGATATCGGATATTTTAATGAAGAAGGAGAATTGTTTGTTGTGGACAGAATCAAAGAACTCATCAAGTGTTATGGTTTTCAGGTTGCACCAGCGGAGCTTGAAGCACTGCTACTTTCCCATCCTCAAATAATAGATGCCATTGTGATCCCATATCCTGATGATAAAGCCGGTGAGGTCCCTATTGCATTTGTTGTTCGTTCACCTAGTAGCTCAATAAATGAAGAAGATGTTAAAAGTTTTATCGCGGGTCAGGTTGCACCATTCAAGAGATTAAAAACAGTAACCTTCACGAGTAGCATTCCGAAGTCGGCTTCGGGAAAGCTTCTGAGAAGGGAGCTCATAGCACAAGTCCGCGCCAAGATGTAG 1638 46.34 MAIAMAKSFNPQSQIYTSPRPPIHFPTDPTISILSFLFRNSSSFLHSLALADADSGESLTFRQLQIQVSKLAHAFIHLGIRKGDVVLIFAPNSIHFPVCFFAIVAIGAIATTCNPAYTFAEISKQVASCNPKLVITIPELWDVIGKLNLPSIILGSKISSKSSRPNIWVYSDLIKNSGDVSDLPVSEVGQSDVAALLYSSGTTGINKGVILTHRNFITTSLMVTHDQDLLGDPRNVFLCFLPMFHVFGLSVILYSQLQRGNTVVSMAKFELEKALGVVMKYRITHLYLVPPVIIAMAKQSVVKRYDLSSLKQILSGAAPLGKDVMEECSKVLPQTKITQGYGMTETCGVISMENLGVESRLSGSTGFLVSGIEAQILSTETQKRLPPGETGEICVRGPNMMKGYFNNQKATSQTIDDQGWVHTGDIGYFNEEGELFVVDRIKELIKCYGFQVAPAELEALLLSHPQIIDAIVIPYPDDKAGEVPIAFVVRSPSSSINEEDVKSFIAGQVAPFKRLKTVTFTSSIPKSASGKLLRRELIAQVRAKM 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 991400 995533 - CmaCh14G002250.1 Cma14g00225 307208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00225 545 SUPERFAMILY Acetyl-CoA synthetase-like 16 543 - -
Cma14g00225 545 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 8 544 - -
Cma14g00225 545 Gene3D - 443 544 IPR045851 -
Cma14g00225 545 Gene3D - 14 442 IPR042099 -
Cma14g00225 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 544 - -
Cma14g00225 545 CDD 4CL 25 537 - -
Cma14g00225 545 Pfam AMP-binding enzyme 48 447 IPR000873 -
Cma14g00225 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00515 Cma-Chr1:2648430 Cma14g00225 Cma-Chr14:991400 0 dispersed
Cma04g01396 Cma-Chr4:7127905 Cma14g00225 Cma-Chr14:991400 4.90E-137 dispersed
Cma13g00793 Cma-Chr13:6766961 Cma14g00225 Cma-Chr14:991400 2.24E-135 dispersed
Cma14g00225 Cma-Chr14:991400 Cma18g00222 Cma-Chr18:1201248 8.72E-131 dispersed
Cma19g00204 Cma-Chr19:1351565 Cma14g00225 Cma-Chr14:991400 3.50E-119 dispersed
Cma20g00058 Cma-Chr20:258462 Cma14g00225 Cma-Chr14:991400 8.02E-20 dispersed
Cma14g00225 Cma-Chr14:991400 Cma09g00069 Cma-Chr9:298453 5.54E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00225 K01904 - csv:101204417 927.161