Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g00234 | ATGCCGTTCCAGAGGATAGTAATCGCCGTCGGCCGGCCGGAGGAGGCCACCCATCCCGCCGCCCTGAAGGCCGCCTTGGCCGAGTTCATTTCCACTCTTATCTTCGTTTTCGCCGGCCAAGGTTCGGGTCTTGCTTTCTCTAAACTCACCCATAATTCTCCCACCTCCCCTGCTGCCCTCATCATCGCTTCCTTAGCTCATGGCTTTGCCCTTTTCGTCGGAGTCTCCACCGGCGCCAACATCTCCGGCGGCCACCTCAACCCCGCCGTCACTTTCGGAGCGTTAGTAGGCGGAAACATCACCCTCCTCCGCGGCATTCTCTACTGGATAGCCCAGCTCCTCGGCGCTCTTGTCGCTAACTTGTTGCTTAAGTTCGTCATCACGGACGTAGTAATTTCTGGATTCTCGCTGTCAGCAGGGGTGGGAGTGTGGGAGGCGCTCGTATTCGAGATCGTAATGACATTCGGATTAGTATACACAGTTTACGCCACCGCCATCGACCCGAAGAAGGGTGAGTTGGGAGTGATAGCACCCATCGCCATCGGTTTCATAGTGGCCGCCAACATTCTGGTGGGCGGCCCATTCACCGGCGCCTCCATGAACCCGGCCGTGGCTTTCGGACCCGCCGTCGTGGCTGGGTCTTGGGCCCAGCACTGGATCTACTGGGCCGGCCCACTGATTGGCGGCGGCTTGGCTGGCATTGTCTATGAGCTGTTCTTCATTGGGTTCACCCATGAGCCCCTCCCCGCCGCGGAGTACTAA | 762 | 59.06 | MPFQRIVIAVGRPEEATHPAALKAALAEFISTLIFVFAGQGSGLAFSKLTHNSPTSPAALIIASLAHGFALFVGVSTGANISGGHLNPAVTFGALVGGNITLLRGILYWIAQLLGALVANLLLKFVITDVVISGFSLSAGVGVWEALVFEIVMTFGLVYTVYATAIDPKKGELGVIAPIAIGFIVAANILVGGPFTGASMNPAVAFGPAVVAGSWAQHWIYWAGPLIGGGLAGIVYELFFIGFTHEPLPAAEY | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1032156 | 1034632 | - | CmaCh14G002340.1 | Cma14g00234 | 307217 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g00234 | 253 | PANTHER | AQUAPORIN-8 | 7 | 252 | IPR034294 | - | |
Cma14g00234 | 253 | PRINTS | Major intrinsic protein family signature | 23 | 42 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | PRINTS | Major intrinsic protein family signature | 67 | 91 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | PRINTS | Major intrinsic protein family signature | 104 | 123 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | PRINTS | Major intrinsic protein family signature | 149 | 167 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | PRINTS | Major intrinsic protein family signature | 182 | 204 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | PRINTS | Major intrinsic protein family signature | 219 | 239 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | CDD | MIP | 23 | 239 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | Pfam | Major intrinsic protein | 16 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00234 | 253 | ProSitePatterns | MIP family signature. | 85 | 93 | IPR022357 | - | |
Cma14g00234 | 253 | SUPERFAMILY | Aquaporin-like | 15 | 248 | IPR023271 | - | |
Cma14g00234 | 253 | PANTHER | AQUAPORIN TIP1-1 | 7 | 252 | - | - | |
Cma14g00234 | 253 | Gene3D | Glycerol uptake facilitator protein. | 6 | 248 | IPR023271 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma07g00887 | Cma14g00234 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g00719 | Cma-Chr8:4353546 | Cma14g00234 | Cma-Chr14:1032156 | 2.00E-94 | dispersed | |
Cma12g00256 | Cma-Chr12:1299988 | Cma14g00234 | Cma-Chr14:1032156 | 2.34E-79 | dispersed | |
Cma13g00950 | Cma-Chr13:7449215 | Cma14g00234 | Cma-Chr14:1032156 | 1.79E-91 | dispersed | |
Cma14g00234 | Cma-Chr14:1032156 | Cma18g00110 | Cma-Chr18:540120 | 4.37E-87 | dispersed | |
Cma14g00234 | Cma-Chr14:1032156 | Cma03g01199 | Cma-Chr3:8008162 | 2.37E-127 | wgd | |
Cma14g00234 | Cma-Chr14:1032156 | Cma07g00887 | Cma-Chr7:4200653 | 1.88E-126 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g00234 | K09873 | - | csv:101222386 | 426.402 |