Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00247 ATGTTCAGGTTGCACAAGAACCGCCAAGCGAATTCGAAGGAGAAATATGATTTCAAGCTCTCCAACTTCAAGGCAATCCAGGTACCTAAAGGTTGGGACAAGCTATTTGTATCTGTAACCTCAGAGCAAACTGGGAAGACAATTGTCAGGACAAGCAAAGGATCAGTCCGTAATGGAAGTTGCCAGTGGACCGAGTCTATATCAGAATCCATTTCGGTTTCACAAGATGAACCTTCTAAGGAGTTTGAAGATTTTAATTACAAGCTGGTTGTGGCCATGGGATCATCAAGATCTAGTATTCTTGGAGAGGCTATGATCAACCTGACAGATTACACAGATCCTAAATCTTCTTCTTCAGTCTTACTTCCACTGAAAAAGTGCAATCATGGGACTATTTTACAAGTGAAAATCCAGTGCGTAACGCCAATATCAAAAGTAAGGAGTAGAAAAATTAAACAGACAAATTCTCTAAAAGAAGACTTGAAGAAAGAAGGTCACGACTCAGATAGCTGCTCAGATATTACAGATAGCCAAGTGTCGGGAAGTATTGGATCTTCCTCTGGTGCAGATTTATACTCTAGCTTTCACTCGGGAGATGCTAGCAGCACGGAAGCAAGTTACTCTGCTTCGGATTCACACATCGGCAATAATTCTTCTGAGGCTTATGATTCAGTAGAGAGTGACGCTACAAAAAACAATTACAATGATATTCGAAGACAAGACTCGGTGTGCTCACAGAACAGTGGTTCAGCAGAAACAACGACTACTGAGGAACTTCGCGCTGAAGCTAGGATGTGGGAGAGCAATGCCCGCAAACTGATGGCTGATCTTGATCAGTTGAAGAAAGAGTTTTCAGATCAATCTGAAAACCAGGAAAGTTTACGTGCTGCACTTTCAGCAGCAACTGCGGAATGTGATGGGTTGAGAAAAGAACTTGAGGAACTGAAACCGATGACTGAGAGGTCGACTCAAAGACAAACAAGCATCGAGGACGAAACAAAAATCTTAGATGAATTGAAAGATGAACTGAAGTTCCAAAAAGAATCCAATGCTGATTTAGCTCTGCAGCTAAAGAGAAGTCAAGAATCAAATATTGAGCTTGTGTCCGTTCTTAAGGAGCTAGAAGAGATTACTGAAAACCAGAAATTGGAGATAGAGGAACTTTTGACACAGCAAAGAAATGTTGATGATTACGAAAATATTAATCAAGAAAACAAAAAATTGATGCTTCAATTGGAGCATGTGAAGGAATCAGAAAAAAATCTTCAATTTAAGATTGAGGTTCTGGAGAGAAACTTGGAGGAAACCAAACTTGATTTGCAGAAATGCGAGGTCTCCAACCAAAGATTCCCTCAGGGTACAGACGGGGAATACGATAGTACGCTTCATTCTGAGGAAAATTTAGTGGAAGACATTGAAAGATTGAAAGAAAAAGTGCAGGAGTTAGAAAAAGATTGTAATGAATTGACAGAGGAAAATATGAACCTCTTGTACAAGCTTAAGCAAGCAAATAACGACTCTAAGGGGGGAGAGTTGGCTTTGAACTCCACAGCTGGTGAGCTTTTGATTGAGAATAACGATGGTCCTTTCAGTAAAAATGTAGATAGTAGAGAAATTGAGCTGGAAGTCAAAGTTGAAGAGCTCAGTAGGGAATTGACTGAGAAAAAGATGGAGATTGAAGAACTTGAGCACAGCATTTTGTCCAAAGACGACGAGATTAAGATCCTTGAAGATTTGCATAACAAATTGCAAGCTGAGTATTCTGGTCTTCAGAAAGAAAAAAATCAGATGGAGGAACAAATGGAAGTCATACATGGAGAAAGTGACATCAGTGCTAGAAGCTTAAATGATTTGAGAAATGAAGTAAAGACGCTTAGCAACAGTGTGGATTTGCATATTTCTGCAAACAAGATTCTTGAAAGTAAATATTCAGAGCTTCAATGTGAAAAACAAGAACTTGAACTCCATATATCTCAGATCGAACAGAAAAGCACACAGTTGTCAGAAAGCATATCTGTTTTGGAATCACAACTAAAATCTATGACGGACGAGAAGGAGTCAATTCGCCTTGAGTTAGAGAACTTTAAGTCTGATGCAGTGGCTCTCCAGGATGAGGTTGATAGACAGAGACTCGAGATAGAGACAGAAAGTGTTGATTTGAAACAAATGTTGAATGACTTGCAAAACAAATGTGCAGAGGCTCAAGATAAATGTGAGTACCTGCAAAGAGAAAAAACAAACTTGGAAGCTGCAGCTGAGCATCTCTCTGAAGAACGAAATTTTCTTAGAGAATCAAATGGAGAGCTGAAGAAAAAGAATGTCGAGTTGCATGAGGATTATTTCCGCTTGGAATCGAAATTGAAGGAATCGCTTGAAAGGTCCGCCCGTTATTTCATAAGAGTTGATGATTTGGAGGATAATCTCTTTCTCGGGTTGGAGGATTTAACCTCAAAAGAAAGATTCCTATCTTCGGAGTTAGATTCAATCGTTGAAGAGAACATAAAATACAAAGAGAAATGTTCATTGTTTGAAAACTTGTATAATGAGACATATTTGGAGAAGACAACTGAAGTTCAAGAACTTCAAGCAGCGGTTGTGCACCTGACCATGGAACTTTCAGCTACAAAGAATGATCTCAACGTCATGGAATCTAATGAACAGTTACTGGCTCTGATCAGTGAGCTTTCCGTGTCAAAAAAAAACCAAGAGATACTGATGGCTGAACATGAAGAGTTACTGAAGCAGTTGGAAAATCACAAATCACTTGAAGTCAAACTTAAGAACTCTGTCGATGATCTTGAATTAAAGCTTTCTTTTTCTGAAAAAGAACGAAAGCAGCATGAGGAAGAATTAACTTACTTAAAGCGTCTAAAACGATCTCAATTCCTTGAAGCAGAACTGAAACGTTTGAAGGAGGAAAAACAGATCCAGCGGGAGTCTAGCATTGATGATAGTGGATGCGATATTGATGTTGAAGGTCCTAATGTTGCTGAAGCTGAATCAATTGAAAGAATTCAGTTGCTCGAAAAAGAACTTGCTGAGGTTTTGGAAGCAAACAAGAAATATGAAGATCAGCTGAGCAGGGTCATTCAAGACGATCAAAACAACAAAGAAAATTCTCCTATACCAACAGTTGGAGGCGATGTAATGACGAAGGAAGGATATGAAAGCATTAACTCGGCTCTAGAGGAGGAGCTAAGAGACCTTCGTGAGCGGTACTTCCACATGAGCCTTAAGTACGCTGAAGTCGAGCAAGAGCGTGAGGAACTTGTTCTGAAGCTGAGAGCAGCCAAGAGCACCGGAAGGAGTTGTCTACGTAGTGATGATGGGGTGAATGGTATTGGAGCTTGGAGAGATATAATAGCTAAAGCAGATTGGCACTCACTTGTGGTGTTCTTCCGTTGCTTCCTCAGGTTTGTAAGGATACCTCTGTGGAGCAAAAACCTGATGTAG 3453 39.88 MFRLHKNRQANSKEKYDFKLSNFKAIQVPKGWDKLFVSVTSEQTGKTIVRTSKGSVRNGSCQWTESISESISVSQDEPSKEFEDFNYKLVVAMGSSRSSILGEAMINLTDYTDPKSSSSVLLPLKKCNHGTILQVKIQCVTPISKVRSRKIKQTNSLKEDLKKEGHDSDSCSDITDSQVSGSIGSSSGADLYSSFHSGDASSTEASYSASDSHIGNNSSEAYDSVESDATKNNYNDIRRQDSVCSQNSGSAETTTTEELRAEARMWESNARKLMADLDQLKKEFSDQSENQESLRAALSAATAECDGLRKELEELKPMTERSTQRQTSIEDETKILDELKDELKFQKESNADLALQLKRSQESNIELVSVLKELEEITENQKLEIEELLTQQRNVDDYENINQENKKLMLQLEHVKESEKNLQFKIEVLERNLEETKLDLQKCEVSNQRFPQGTDGEYDSTLHSEENLVEDIERLKEKVQELEKDCNELTEENMNLLYKLKQANNDSKGGELALNSTAGELLIENNDGPFSKNVDSREIELEVKVEELSRELTEKKMEIEELEHSILSKDDEIKILEDLHNKLQAEYSGLQKEKNQMEEQMEVIHGESDISARSLNDLRNEVKTLSNSVDLHISANKILESKYSELQCEKQELELHISQIEQKSTQLSESISVLESQLKSMTDEKESIRLELENFKSDAVALQDEVDRQRLEIETESVDLKQMLNDLQNKCAEAQDKCEYLQREKTNLEAAAEHLSEERNFLRESNGELKKKNVELHEDYFRLESKLKESLERSARYFIRVDDLEDNLFLGLEDLTSKERFLSSELDSIVEENIKYKEKCSLFENLYNETYLEKTTEVQELQAAVVHLTMELSATKNDLNVMESNEQLLALISELSVSKKNQEILMAEHEELLKQLENHKSLEVKLKNSVDDLELKLSFSEKERKQHEEELTYLKRLKRSQFLEAELKRLKEEKQIQRESSIDDSGCDIDVEGPNVAEAESIERIQLLEKELAEVLEANKKYEDQLSRVIQDDQNNKENSPIPTVGGDVMTKEGYESINSALEEELRDLRERYFHMSLKYAEVEQEREELVLKLRAAKSTGRSCLRSDDGVNGIGAWRDIIAKADWHSLVVFFRCFLRFVRIPLWSKNLM 1150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1075607 1081060 - CmaCh14G002470.1 Cma14g00247 307230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00247 1150 Coils Coil 462 506 - -
Cma14g00247 1150 PANTHER HEAVY CHAIN-LIKE PROTEIN, PUTATIVE-RELATED 875 955 - -
Cma14g00247 1150 Coils Coil 1052 1100 - -
Cma14g00247 1150 MobiDBLite consensus disorder prediction 157 171 - -
Cma14g00247 1150 PANTHER PROTEIN MLP1-LIKE 247 878 - -
Cma14g00247 1150 PANTHER PROTEIN MLP1-LIKE 957 1101 - -
Cma14g00247 1150 Coils Coil 636 772 - -
Cma14g00247 1150 Coils Coil 371 391 - -
Cma14g00247 1150 Coils Coil 858 878 - -
Cma14g00247 1150 Coils Coil 256 311 - -
Cma14g00247 1150 Coils Coil 329 356 - -
Cma14g00247 1150 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 13 139 IPR019448 -
Cma14g00247 1150 PANTHER PROTEIN MLP1-LIKE 1 247 - -
Cma14g00247 1150 PANTHER PROTEIN MLP1-LIKE 875 955 - -
Cma14g00247 1150 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Cma14g00247 1150 PANTHER HEAVY CHAIN-LIKE PROTEIN, PUTATIVE-RELATED 1 247 - -
Cma14g00247 1150 PANTHER HEAVY CHAIN-LIKE PROTEIN, PUTATIVE-RELATED 247 878 - -
Cma14g00247 1150 PANTHER HEAVY CHAIN-LIKE PROTEIN, PUTATIVE-RELATED 957 1101 - -
Cma14g00247 1150 MobiDBLite consensus disorder prediction 157 182 - -
Cma14g00247 1150 SUPERFAMILY Myosin rod fragments 582 695 - -
Cma14g00247 1150 MobiDBLite consensus disorder prediction 202 259 - -
Cma14g00247 1150 Coils Coil 899 980 - -
Cma14g00247 1150 Coils Coil 398 446 - -
Cma14g00247 1150 Coils Coil 998 1032 - -
Cma14g00247 1150 Coils Coil 538 607 - -
Cma14g00247 1150 MobiDBLite consensus disorder prediction 202 256 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00247 Cma-Chr14:1075607 Cma15g00731 Cma-Chr15:3536913 1.17E-35 dispersed
Cma14g00247 Cma-Chr14:1075607 Cma06g00414 Cma-Chr6:1917891 1.83E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00247 - - cmos:111442407 2004.56